Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001397-TA|BGIBMGA001397-PA|undefined
         (194 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060845-1|AAH60845.1|  755|Homo sapiens l(3)mbt-like 3 (Drosoph...    29   7.9  
AL583846-1|CAH73677.1|  780|Homo sapiens RP11-73O6.1 protein.          29   7.9  
AL355581-1|CAI95325.1|  780|Homo sapiens RP11-73O6.1 protein.          29   7.9  
AB058701-1|BAB47427.1|  781|Homo sapiens KIAA1798 protein protein.     29   7.9  

>BC060845-1|AAH60845.1|  755|Homo sapiens l(3)mbt-like 3
           (Drosophila) protein.
          Length = 755

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 19  EDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSRPWILQDGRTVPGIGSEMRENYQIPKR 78
           E S P I P+   K H +  I P  Y   K+FS    L++  ++P      +       +
Sbjct: 392 EASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFK------VK 445

Query: 79  PPHTEGIRKRM 89
           PPH  G +K+M
Sbjct: 446 PPH--GFQKKM 454


>AL583846-1|CAH73677.1|  780|Homo sapiens RP11-73O6.1 protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 19  EDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSRPWILQDGRTVPGIGSEMRENYQIPKR 78
           E S P I P+   K H +  I P  Y   K+FS    L++  ++P      +       +
Sbjct: 417 EASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFK------VK 470

Query: 79  PPHTEGIRKRM 89
           PPH  G +K+M
Sbjct: 471 PPH--GFQKKM 479


>AL355581-1|CAI95325.1|  780|Homo sapiens RP11-73O6.1 protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 19  EDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSRPWILQDGRTVPGIGSEMRENYQIPKR 78
           E S P I P+   K H +  I P  Y   K+FS    L++  ++P      +       +
Sbjct: 417 EASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFK------VK 470

Query: 79  PPHTEGIRKRM 89
           PPH  G +K+M
Sbjct: 471 PPH--GFQKKM 479


>AB058701-1|BAB47427.1|  781|Homo sapiens KIAA1798 protein protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 19  EDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSRPWILQDGRTVPGIGSEMRENYQIPKR 78
           E S P I P+   K H +  I P  Y   K+FS    L++  ++P      +       +
Sbjct: 418 EASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFK------VK 471

Query: 79  PPHTEGIRKRM 89
           PPH  G +K+M
Sbjct: 472 PPH--GFQKKM 480


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.134    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,340,911
Number of Sequences: 224733
Number of extensions: 1448471
Number of successful extensions: 2192
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2188
Number of HSP's gapped (non-prelim): 8
length of query: 194
length of database: 73,234,838
effective HSP length: 86
effective length of query: 108
effective length of database: 53,907,800
effective search space: 5822042400
effective search space used: 5822042400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)