Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001396-TA|BGIBMGA001396-PA|IPR007482|Protein tyrosine
phosphatase-like protein, PTPLA, IPR007052|CS, IPR008978|HSP20-like
chaperone
(372 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 28 0.12
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 28 0.12
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 4.7
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 22 8.2
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 27.9 bits (59), Expect = 0.12
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 218 KGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPV-VFYLFVVW--TCIEIVRYPYYMSQL- 273
K G+ + + +FV++ +++ P + PV V + V W + Y ++ L
Sbjct: 216 KMGLDIASITAQASSFVVWPLVENNPTLYLIPVSVILISVGWWENFVSETSYLPFIRALG 275
Query: 274 -YKKEFALLTWLRYTLWIPLYPMGIVCEATII 304
KKEF T+ Y P+ + C A +I
Sbjct: 276 KSKKEFKTRTYFIYAFVAPVKCLAFFCTALVI 307
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 27.9 bits (59), Expect = 0.12
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 218 KGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPV-VFYLFVVW--TCIEIVRYPYYMSQL- 273
K G+ + + +FV++ +++ P + PV V + V W + Y ++ L
Sbjct: 216 KMGLDIASITAQASSFVVWPLVENNPTLYLIPVSVILISVGWWENFVSETSYLPFIRALG 275
Query: 274 -YKKEFALLTWLRYTLWIPLYPMGIVCEATII 304
KKEF T+ Y P+ + C A +I
Sbjct: 276 KSKKEFKTRTYFIYAFVAPVKCLAFFCTALVI 307
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 204 MQYLEVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTK--PVVFYLFVVWTCI 261
M Y+ + G T G FL + G AFV ID P++F++ V +TC
Sbjct: 907 MPYIGYQILLMGGTILGPGTIFLMLVG-AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCK 965
Query: 262 EIVRYPYYMSQLYKKEFALL 281
++ ++Q+ +AL+
Sbjct: 966 SNIQ--LIVAQILSTGYALI 983
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 204 MQYLEVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTK--PVVFYLFVVWTCI 261
M Y+ + G T G FL + G AFV ID P++F++ V +TC
Sbjct: 907 MPYIGYQILLMGGTILGPGTIFLMLVG-AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCK 965
Query: 262 EIVRYPYYMSQLYKKEFALL 281
++ ++Q+ +AL+
Sbjct: 966 SNIQ--LIVAQILSTGYALI 983
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 204 MQYLEVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTK--PVVFYLFVVWTCI 261
M Y+ + G T G FL + G AFV ID P++F++ V +TC
Sbjct: 907 MPYIGYQILLMGGTILGPGTIFLMLVG-AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCK 965
Query: 262 EIVRYPYYMSQLYKKEFALL 281
++ ++Q+ +AL+
Sbjct: 966 SNIQ--LIVAQILSTGYALI 983
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 204 MQYLEVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTK--PVVFYLFVVWTCI 261
M Y+ + G T G FL + G AFV ID P++F++ V +TC
Sbjct: 907 MPYIGYQILLMGGTILGPGTIFLMLVG-AFVAAFQIDNWTSFYYNIIPILFFMLVCFTCK 965
Query: 262 EIVRYPYYMSQLYKKEFALL 281
++ ++Q+ +AL+
Sbjct: 966 SNIQ--LIVAQILSTGYALI 983
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 275 KKEFALLTWLRYTLWIPLYPMGIVCEATII 304
KKEF T+ Y P+ + C A +I
Sbjct: 45 KKEFKTRTYFIYAFVAPVKCLAFFCTALVI 74
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 86 LQKVKPVWWPRLTAQPQKPAWLKINFDLWKSEDG 119
L K KP WW L + K ++ + E+G
Sbjct: 89 LIKNKPSWWQELQEKYDPKGEYKSRYNHFLEEEG 122
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.325 0.141 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,566
Number of Sequences: 317
Number of extensions: 4166
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 8
length of query: 372
length of database: 114,650
effective HSP length: 58
effective length of query: 314
effective length of database: 96,264
effective search space: 30226896
effective search space used: 30226896
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)
- SilkBase 1999-2023 -