Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001396-TA|BGIBMGA001396-PA|IPR007482|Protein tyrosine
phosphatase-like protein, PTPLA, IPR007052|CS, IPR008978|HSP20-like
chaperone
(372 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical pr... 76 5e-14
AF022985-14|AAB69975.2| 218|Caenorhabditis elegans Hypothetical... 73 3e-13
U13642-6|AAG00038.1| 175|Caenorhabditis elegans Hypothetical pr... 69 5e-12
Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical pr... 30 2.3
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 30 2.3
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 30 2.3
AF016420-5|AAB65309.1| 651|Caenorhabditis elegans Na/ca exchang... 29 4.0
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z93397-7|CAB07722.2| 483|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z93372-6|CAB07549.2| 483|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z68114-7|CAA92161.1| 317|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z50874-9|CAA90769.1| 202|Caenorhabditis elegans Hypothetical
protein R10E4.9 protein.
Length = 202
Score = 75.8 bits (178), Expect = 5e-14
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 151 DLKKVYLFIYNLFQFXXXXXXXXXXXXXXXKLDYDSVTDTYEHVGSAMKFLQLMQYLEVL 210
D K + LFIY L F ++ Y + + F+ +QYL++
Sbjct: 3 DFKNMILFIYTLVLFILHGYGFLYIFHAEYTSEFK-----YPEIMWFLLFITSLQYLDIP 57
Query: 211 HPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPVVFYLFVVWTCIEIVRYPYYM 270
F TK + F+QV+GR VL++ A + K F L V+ E+ R PYY+
Sbjct: 58 FSFF-LTKSNPVAVFVQVSGRLLVLWV---ASHMVSWKYAAFSLVAVYLLSELCRGPYYL 113
Query: 271 SQLYKKEFALLTWLRYTLWIPLYPMGIVCEATIILRNIPYFEETQKYTVSLPNAWNFAFH 330
S LTWLRY + LYP+G CEA + + N+ F + K + + + + F +
Sbjct: 114 SNCLGTPNRSLTWLRYNAFKVLYPVGFTCEALVFI-NV--FFVSGKIPIDIKDRY-FQYS 169
Query: 331 MPTFLKFYLLVLTF 344
+ F F+L ++TF
Sbjct: 170 L-LFTVFFLTIVTF 182
>AF022985-14|AAB69975.2| 218|Caenorhabditis elegans Hypothetical
protein T15B7.2 protein.
Length = 218
Score = 73.3 bits (172), Expect = 3e-13
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 191 YEHVGSAMKFLQLMQYLEVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPV 250
YE V +K Q LEV+H + G + V +QVT R +++ ++ +
Sbjct: 39 YESVEFELKIFQTAAILEVIHAIVGLVRSPVGTTAMQVTSRVVLVWPILHLCSTARFSIG 98
Query: 251 VFYLFVVWTCIEIVRYPYYMSQLYKKEFA-LLTWLRYTLWIPLYPMGIVCEATIILRNIP 309
V L V W+ E++RY +Y + K+ L +LRYTL+ LYPMG+ E + ++
Sbjct: 99 VPLLLVAWSVTEVIRYSFYALSVLKQPIPYFLLYLRYTLFYVLYPMGVSGELLTLFASLN 158
Query: 310 YFEETQKYTVSLPNAWN--FAFHMPTFLKFYLLVLTFPGMFLVM 351
+E + T+ +PN N +F + + FP ++ M
Sbjct: 159 EVDEKKILTLEMPNRLNMGISFWWVLIIAALSYIPGFPQLYFYM 202
>U13642-6|AAG00038.1| 175|Caenorhabditis elegans Hypothetical
protein ZC395.10 protein.
Length = 175
Score = 68.9 bits (161), Expect = 5e-12
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 6 PFVYWAQTESTISLKIDLKNALKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKS 65
P V WAQ ES + L I++ A ++K N + F G+ +YE L+ F I
Sbjct: 5 PTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQ----GSSKTDKYEATLEFFDEIDP 60
Query: 66 LEPGGEHITLRVFENRIELILQKVKPVWWPRLTAQPQKPAWLKINFDLWKSEDGQESDEE 125
+ RV +E+ +QK P WWPRL K WLK++F WK ED + E+
Sbjct: 61 ASVKHTGSSTRV----VEITVQKKTPAWWPRLLQNKGKVHWLKVDFGKWKDEDEDDEAED 116
>Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical
protein C05G5.4 protein.
Length = 322
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 27 LKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKSLEPGGEHITLRVFEN 80
+ D KV+ FT K G+ E+N + + + + G EH+ L VF+N
Sbjct: 30 INKDTKVIVQG--FTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKN 81
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 321 LPNAWNFAFHMPTFLKFYLLVLTFPGMFLVMKHMHRLRNIKLRP 364
+P W + P ++ F L +LT + ++++ + R + KLRP
Sbjct: 199 IPGIWFHLYSAPIWISFILTILTVFVILILIEDISREKKTKLRP 242
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 321 LPNAWNFAFHMPTFLKFYLLVLTFPGMFLVMKHMHRLRNIKLRP 364
+P W + P ++ F L +LT + ++++ + R + KLRP
Sbjct: 199 IPGIWFHLYSAPIWISFILTILTVFVILILIEDISREKKTKLRP 242
>AF016420-5|AAB65309.1| 651|Caenorhabditis elegans Na/ca exchangers
protein 9 protein.
Length = 651
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 58 DLFSNIKSLEPGGEHITLRVFENRIELILQKVKPVWWPRLTAQPQKPAWLKINFDL 113
DLF+++KS E + +F + +I KV PV++ +LT + +W K F L
Sbjct: 380 DLFNHLKSWPSRDEFSEMNIFIKIVTVI--KVVPVFFFKLTVPSNEMSWCKPLFIL 433
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 28.7 bits (61), Expect = 7.0
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 78 FENRIELILQKVKPVWWPRLTAQPQKPAWL-KINFDLWKSEDGQE--SDEEKRDVMRDYP 134
FE + L +Q + +L AQ + A L K N DL K E+G+E +EE +V D+
Sbjct: 194 FEEALTLKIQAMMIETTGQLEAQKKIIADLQKKNDDLMKEEEGEEDYEEEENYEVEEDFE 253
Query: 135 G--MYDQLHQEE 144
YD+ +EE
Sbjct: 254 DEEEYDEEGEEE 265
>Z93397-7|CAB07722.2| 483|Caenorhabditis elegans Hypothetical
protein ZC482.5 protein.
Length = 483
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 9 YWAQTESTISLKIDLK-NALKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKSLE 67
Y + TI L D + PD L V + + G E EF+LD + K L+
Sbjct: 43 YTTKVLDTILLNQDKNFRPVNPDNSPLQVEVDISIRSMGPVSEQNMEFSLDCYFRQKWLD 102
Query: 68 PGGEHITLRVFENRIELILQKVKPVWWP 95
+ + I L + +K +W P
Sbjct: 103 RRLAFTPINPSKPEIPLASKMLKDIWIP 130
>Z93372-6|CAB07549.2| 483|Caenorhabditis elegans Hypothetical
protein ZC482.5 protein.
Length = 483
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 9 YWAQTESTISLKIDLK-NALKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKSLE 67
Y + TI L D + PD L V + + G E EF+LD + K L+
Sbjct: 43 YTTKVLDTILLNQDKNFRPVNPDNSPLQVEVDISIRSMGPVSEQNMEFSLDCYFRQKWLD 102
Query: 68 PGGEHITLRVFENRIELILQKVKPVWWP 95
+ + I L + +K +W P
Sbjct: 103 RRLAFTPINPSKPEIPLASKMLKDIWIP 130
>Z68114-7|CAA92161.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.10 protein.
Length = 317
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 284 LRYTLWIPLYPMGIVCEATIILRNIPYFEETQKYTVSLPNAWNFAFHMPTFLKFYLLVLT 343
LRY I Y M ++CE T+++ +I F T+ + + H KF +++L+
Sbjct: 79 LRYLDAIVAYTMYVLCEGTVLMSSILIF-----ITMYVKYEAVRSIHRERSAKFSVIILS 133
Query: 344 FPGMFLVM 351
+F+ M
Sbjct: 134 LSPLFITM 141
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.141 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,324,943
Number of Sequences: 27539
Number of extensions: 396541
Number of successful extensions: 1352
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1342
Number of HSP's gapped (non-prelim): 13
length of query: 372
length of database: 12,573,161
effective HSP length: 82
effective length of query: 290
effective length of database: 10,314,963
effective search space: 2991339270
effective search space used: 2991339270
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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