Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001395-TA|BGIBMGA001395-PA|IPR001353|20S proteasome, A
and B subunits
(192 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 298 6e-80
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 256 2e-67
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 241 1e-62
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 237 2e-61
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 223 2e-57
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 221 9e-57
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 213 3e-54
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 198 5e-50
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 197 2e-49
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 195 6e-49
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 193 2e-48
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 184 2e-45
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 174 1e-42
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 167 1e-40
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 154 1e-36
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 93 3e-18
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 88 1e-16
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 87 2e-16
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 87 2e-16
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 85 8e-16
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 85 1e-15
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 85 1e-15
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 83 5e-15
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 81 1e-14
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 81 2e-14
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 80 3e-14
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 80 3e-14
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 79 9e-14
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 78 1e-13
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 76 5e-13
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 75 1e-12
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 73 6e-12
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 72 8e-12
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 71 2e-11
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 70 3e-11
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 70 4e-11
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 69 5e-11
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 69 7e-11
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 69 1e-10
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 68 1e-10
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 68 2e-10
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 68 2e-10
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 67 2e-10
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 66 5e-10
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 65 9e-10
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 64 2e-09
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 64 2e-09
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 64 2e-09
UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;... 63 5e-09
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 62 6e-09
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 62 1e-08
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 61 1e-08
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 59 6e-08
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 58 1e-07
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 58 1e-07
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 58 2e-07
UniRef50_A7DQ84 Cluster: Proteasome endopeptidase complex; n=1; ... 58 2e-07
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 57 2e-07
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 57 3e-07
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 56 4e-07
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 56 4e-07
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 55 9e-07
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 54 2e-06
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 54 2e-06
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 53 4e-06
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 53 5e-06
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 52 7e-06
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 52 7e-06
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 52 1e-05
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 51 2e-05
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 50 4e-05
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 50 4e-05
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 50 5e-05
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 49 8e-05
UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1; ... 48 1e-04
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 48 2e-04
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 47 3e-04
UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8; Magno... 47 3e-04
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 47 3e-04
UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2... 47 3e-04
UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2; Caen... 46 6e-04
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 46 6e-04
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 46 8e-04
UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit bet... 46 8e-04
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 46 8e-04
UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giar... 45 0.001
UniRef50_Q4Q1Q9 Cluster: Proteasome subunit beta type; n=8; Tryp... 45 0.001
UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5; Oligohymenop... 45 0.001
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 45 0.001
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 44 0.002
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 44 0.002
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 44 0.002
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 44 0.002
UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1; Tric... 44 0.002
UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7; Tryp... 44 0.003
UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=... 43 0.004
UniRef50_Q4UI67 Cluster: Proteasome subunit beta type; n=3; Piro... 43 0.005
UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1; En... 42 0.009
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 42 0.009
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 41 0.017
UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4; Endo... 41 0.017
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 41 0.017
UniRef50_UPI0000499A92 Cluster: proteasome beta subunit; n=1; En... 41 0.022
UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-... 40 0.038
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 40 0.050
UniRef50_A3FQB4 Cluster: Proteasome subunit beta type; n=2; Cryp... 38 0.12
UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1; Ajellom... 38 0.12
UniRef50_Q9U570 Cluster: Proteasome subunit beta type; n=6; Plas... 38 0.15
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 38 0.15
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 38 0.20
UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10, mitoc... 38 0.20
UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1; En... 37 0.27
UniRef50_Q09720 Cluster: Probable proteasome subunit beta type-2... 37 0.27
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 36 0.47
UniRef50_Q86T01 Cluster: Full-length cDNA clone CS0DK007YN03 of ... 36 0.62
UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial... 36 0.62
UniRef50_A2QVK6 Cluster: Catalytic activity: PRE2 has a chymotry... 36 0.82
UniRef50_A5LHX3 Cluster: Proteasome subunit beta type-11 precurs... 36 0.82
UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8; Acon... 34 1.9
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 34 1.9
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 34 2.5
UniRef50_P91477 Cluster: Proteasome subunit beta type-2; n=3; Ca... 34 2.5
UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;... 33 3.3
UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome... 33 3.3
UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome... 33 4.4
UniRef50_Q8BTY5 Cluster: 2 days neonate thymus thymic cells cDNA... 32 7.6
UniRef50_Q8YK43 Cluster: All8075 protein; n=1; Nostoc sp. PCC 71... 32 7.6
UniRef50_Q86LH1 Cluster: Pickpocket 10; n=1; Drosophila melanoga... 32 7.6
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 298 bits (731), Expect = 6e-80
Identities = 131/192 (68%), Positives = 163/192 (84%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
MKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV QRLKFR+NL
Sbjct: 14 MKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNL 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P++C++DLIGCP
Sbjct: 74 YELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVT 133
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+DFVVSGTC+EQ+YGMCE+LWEPN+ PD LFETISQA++NA DRDA+SG G +V+IIEKD
Sbjct: 134 DDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKD 193
Query: 181 KITEKHVKTRMD 192
KIT + +K RMD
Sbjct: 194 KITTRTLKARMD 205
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 256 bits (628), Expect = 2e-67
Identities = 114/171 (66%), Positives = 138/171 (80%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
M G+DC AIA D RFG+ QT+ST+F KV+ +GP LYVG PGLATD QTVFQRL+FR N+
Sbjct: 14 MSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQRLQFRKNM 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YEL+ENR ++P+T + MLSNLLYERRFGPYF+EPV+AG+D ++PYV MDLIGC E
Sbjct: 74 YELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDLIGCVCEA 133
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWG 171
DFVVSGTC+EQ+YGMCE LWE N+ ELFE ISQ ++NA +RDAISG G
Sbjct: 134 NDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISGLG 184
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 241 bits (589), Expect = 1e-62
Identities = 107/192 (55%), Positives = 149/192 (77%), Gaps = 1/192 (0%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
M G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD QT++QRL FR L
Sbjct: 14 MVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKL 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
Y+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P++C MD IG
Sbjct: 74 YQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPFICTMDCIGAKELA 132
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+DFVVSGT SE LYG CE++++PN++P+ELFETISQAL ++ DRD +SGWG V ++
Sbjct: 133 KDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLSGWGGFVLLVTPT 192
Query: 181 KITEKHVKTRMD 192
++ E +K RMD
Sbjct: 193 EVKECVIKGRMD 204
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 237 bits (579), Expect = 2e-61
Identities = 107/191 (56%), Positives = 148/191 (77%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
MKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD Q V Q LKF++NL
Sbjct: 14 MKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDVQRVAQCLKFQLNL 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGLD +P+ C++DLIG P
Sbjct: 74 YELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDLIGFPMVT 133
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+DFVV+G+ +EQ+YGMCE+LWEPN+ P+ FETIS A++NA D A SG G +++I +KD
Sbjct: 134 DDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAGSGMGVIIHITKKD 193
Query: 181 KITEKHVKTRM 191
KIT + +K +M
Sbjct: 194 KITTRTLKAQM 204
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 223 bits (545), Expect = 2e-57
Identities = 100/193 (51%), Positives = 141/193 (73%), Gaps = 2/193 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQ-TVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
M G+ CVAIA DKR G+ Q TVS+NFPK F++ + + GLATD QT+ + F++N
Sbjct: 29 MMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKDEIMFKVN 88
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
+Y+L+ ++ M KT S M+ ++LY RRFGP+F++ VIAGLD D+ PY+ DL+G P
Sbjct: 89 MYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDT-DSSPYITCFDLVGAPCT 147
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
P DFVV+GTCSEQLYG+CEAL++P + P++LFET+SQ L+ DRD +SGWGA V++I
Sbjct: 148 PTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLSGWGAEVHVITP 207
Query: 180 DKITEKHVKTRMD 192
D++ + +KTRMD
Sbjct: 208 DRVISRSLKTRMD 220
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 221 bits (540), Expect = 9e-57
Identities = 99/192 (51%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
M G +CV IA+D R G Q T++T+ KV ++ +YVGL G +D +TV +++ FR NL
Sbjct: 14 MAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNL 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YEL+ENR ++P+ S M+SNL Y+ RFG YF EP++AGLD N+PY+C MD IGC + P
Sbjct: 74 YELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPYICCMDTIGCVSAP 132
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
DFV GT E L G+CE W N+KPDELFE +Q++++ +RDA SGWGAVVY I KD
Sbjct: 133 RDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTITKD 192
Query: 181 KITEKHVKTRMD 192
K+ +K RMD
Sbjct: 193 KVNVSTIKARMD 204
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 213 bits (519), Expect = 3e-54
Identities = 92/192 (47%), Positives = 135/192 (70%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
M G++C + +D R G Q +T+S PK+ + + +GL GL TD QT Q++ FR +
Sbjct: 14 MAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQKVNFRTEM 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
Y+L+E R + K F+A++S++LYE RFGP+F+EPVI +D + Y+C DLIG P EP
Sbjct: 74 YKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGAPCEP 133
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
ED+V +GTC+E L+GMCEALW P L+P+ELFE +QA+++A DRD++SG+GAV I+ KD
Sbjct: 134 EDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGYGAVAAIVTKD 193
Query: 181 KITEKHVKTRMD 192
K+ + +K R D
Sbjct: 194 KLVTRLIKGRKD 205
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 198 bits (484), Expect = 5e-50
Identities = 89/193 (46%), Positives = 130/193 (67%), Gaps = 2/193 (1%)
Query: 1 MKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
MKG++CVA ATD R G +T+ST+F KV + +G GLATD T+ +KF+ N
Sbjct: 13 MKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDIHTLTNLIKFKTN 72
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
LY L+E R + K S M +++LY +RF PYF+EP++AGLD +N P++ DLIGC +
Sbjct: 73 LYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDN-NNVPFIAGYDLIGCLSV 131
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+F +SGT QL+G+CE+ + P+L+PDEL E +SQ +++ DRDA SGWG VY++
Sbjct: 132 CSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGCKVYLLTP 191
Query: 180 DKITEKHVKTRMD 192
+K+ K +K+RMD
Sbjct: 192 EKLVTKTLKSRMD 204
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 197 bits (480), Expect = 2e-49
Identities = 101/204 (49%), Positives = 133/204 (65%), Gaps = 12/204 (5%)
Query: 1 MKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
M G CVAIA D R G TVSTNF K+F+M +YVGL GLATD QT+++ L++R+N
Sbjct: 15 MSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVN 74
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAG------LDPYDN-----QPYV 108
LYE+++ M F+ MLS++LY RF PYF+ P++ G LD +PY+
Sbjct: 75 LYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKVCSFEPYL 134
Query: 109 CNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAIS 168
DLIG E +DFVV+G SEQLYGMCE+L+ + D LFETISQ L++A DRD +S
Sbjct: 135 TAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLS 194
Query: 169 GWGAVVYIIEKDKITEKHVKTRMD 192
GWGA VY++ D I +K +K RMD
Sbjct: 195 GWGAEVYVLTPDTIMKKKLKARMD 218
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 195 bits (475), Expect = 6e-49
Identities = 91/193 (47%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Query: 1 MKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
M G+DCVAIA+D R GI Q QT + ++ K+ ++ L++GL GL D T+ Q+L+F+ +
Sbjct: 12 MVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFKHD 71
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
+YEL+ENR+M PK F++++S LYE+RF PY+ EPV+AGLD D +PY+ +MDLIG
Sbjct: 72 MYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDK-DGKPYITSMDLIGADAS 130
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+DFVV+G E L+G+CE+ + +L+PDELF I L +RD +SGWG +V +I K
Sbjct: 131 ADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLSGWGGIVTLITK 190
Query: 180 DKITEKHVKTRMD 192
D + +K RMD
Sbjct: 191 DGPITRTLKNRMD 203
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 193 bits (471), Expect = 2e-48
Identities = 87/169 (51%), Positives = 121/169 (71%), Gaps = 2/169 (1%)
Query: 1 MKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
M G CV IA+D R+G+ Q QTV K FQ+ +VG+ GLATD QT+ Q L FR+
Sbjct: 15 MAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQTMAQLLDFRIK 74
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
L+ L+E R M+P+T ++S++LYE+RFGPYF EPV+AGLD D+ P++C D IG ++
Sbjct: 75 LFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDK-DHNPFLCAFDFIGAMSK 133
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAIS 168
+DFVVSGT SEQL+G+CE+ W P + DELFET++Q L++A DRD ++
Sbjct: 134 AQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 184 bits (447), Expect = 2e-45
Identities = 85/186 (45%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
VAI DKR G+ + TVS +F ++ ++GP LYVGLP DTQ + ++++ NL+ L+
Sbjct: 21 VAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLRKIRKNYNLFRLEHQ 80
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
R M P+ S+M+S LLY +R PY P++AGL D +PY+ MD IG P DFV
Sbjct: 81 REMEPEELSSMISFLLYSKRETPYITAPIVAGLTS-DGKPYISGMDCIGSIASPGDFVAV 139
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITEKH 186
GT + L G+CEAL+ P++ + LF T QA +NA DRDA+SGWGA Y+I K+K+T++
Sbjct: 140 GTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALSGWGADCYVIGKNKVTKRS 199
Query: 187 VKTRMD 192
+K R D
Sbjct: 200 IKGRCD 205
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 174 bits (424), Expect = 1e-42
Identities = 81/194 (41%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
+KG DCVA+A DKR G QT++ N ++F++ + +GL GL TD T +++++ + N
Sbjct: 15 IKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSN 74
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
LY L+E+R +RP+ + M+S+ LY+ RFGPYFI P+IAG + D +PY+ MD IGC ++
Sbjct: 75 LYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEA-DGKPYLGAMDTIGCLDD 133
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+F ++GT S+ L G+CE +P++ DE+ + Q + +A +RDA SGWGA V ++ +
Sbjct: 134 CTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVLRR 193
Query: 180 DKIT-EKHVKTRMD 192
D T + + TRMD
Sbjct: 194 DGTTSDIPISTRMD 207
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 167 bits (406), Expect = 1e-40
Identities = 79/192 (41%), Positives = 120/192 (62%), Gaps = 2/192 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
M G+ CVAIA D R+G++ Q S NF KVFQ+ G GL +D QT+ +++K+ NL
Sbjct: 16 MAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEKVKYHANL 75
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
Y L+E + P+ +++LY++RF PY++ P+IAG+D N YVC+ D IG P E
Sbjct: 76 YRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS-YVCSYDYIGSP-EI 133
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
GT S +L GMC++ ++ ++P+EL E + Q L+ A +RDA SGWG VY++ +D
Sbjct: 134 SQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFSGWGVEVYLLTRD 193
Query: 181 KITEKHVKTRMD 192
+T ++K R D
Sbjct: 194 NLTIYNMKPRQD 205
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 154 bits (374), Expect = 1e-36
Identities = 77/171 (45%), Positives = 115/171 (67%), Gaps = 4/171 (2%)
Query: 22 VSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNL 81
++T+ K+F MG L + L GLAT+ QT Q LKF++NL EL E ++P T ++++NL
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 82 LYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALW 141
LY+++FGP + EPVIA LD P++C++DLI CP +DFVVS TC+EQ+ GMCE+L
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGMCESLG 121
Query: 142 EPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITEKHVKTRMD 192
+ L ET+SQA++NA D DA + + ++ E+DK T + +K +MD
Sbjct: 122 AHHA---HLLETVSQAMLNAVDGDA-ARCKSHFHLAEEDKTTTRILKAQMD 168
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 93.5 bits (222), Expect = 3e-18
Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K +D V +A +KR T+S+ KVF + L + G+ D QT+ + LK
Sbjct: 14 IKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKILKLNAKA 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YEL+ R + + +LS +++ RRF P+F E ++ G+D + P++ MD +G E
Sbjct: 74 YELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGID--EEGPHLIVMDPLGSLIE- 130
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+++ GT ++ + + + P++ +E + QAL A +RD +SG G + I++K+
Sbjct: 131 DNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGIDLAIVDKN 190
Query: 181 KITEKHVKTRM 191
E+ V+ ++
Sbjct: 191 GAREEEVRVQL 201
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 87.8 bits (208), Expect = 1e-16
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V +AT+KR + S K++Q+ + + G D Q + + +K NLYE+
Sbjct: 20 KDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEI 79
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ R + + + SNLL R+ PY ++ +I G+D Y ++D IG E +D
Sbjct: 80 RRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIY--SIDPIGGAIEEKDI 137
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDK 181
V +G+ S YG+ E + P + DE E +A+ +A RD+ SG G V I +D+
Sbjct: 138 VATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDE 195
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 87.4 bits (207), Expect = 2e-16
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D + IA+D G + K+F++ + +G+ GL D + L++ +++
Sbjct: 13 GKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEILEYEISIVT 72
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
KE + M P +++S LLY++RF PY +E ++AG + +P++ +D IG + +
Sbjct: 73 KKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTE-NGKPFLGTVDCIGAISYISN 131
Query: 123 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIE-KDK 181
+ G E ++ + + LW P + EL +S+++ R+ S + V I K K
Sbjct: 132 YACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSMKVGNRRNCYSSKNSTVMIYNIKYK 191
Query: 182 ITEK 185
I +K
Sbjct: 192 ICKK 195
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 87.4 bits (207), Expect = 2e-16
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
D V +A +KR +S + KV+++ + + GL D QT+ + ++ M LYEL
Sbjct: 15 DGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELD 74
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
N + T + +LS +LYERR PY+ E V+ GLD + Y ++D IG E +D+V
Sbjct: 75 SNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLY--SLDPIGAIIE-DDYV 131
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
G+ ++ + E+ ++ ++ DE +++ A RDA SG G V +I K E
Sbjct: 132 ALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVDVLVIGKSGTLE 191
Query: 185 K 185
K
Sbjct: 192 K 192
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 85.4 bits (202), Expect = 8e-16
Identities = 49/177 (27%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D+R + K+F++ + V G D Q + ++ LYEL+ N
Sbjct: 22 VVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLMRAEARLYELRHN 81
Query: 67 RMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
RM+ + + M+S++L+ + F PY ++ ++ G + D+ P + N+D G E ED+
Sbjct: 82 RMISARALANMISHVLHSSLKAFRPYLVQLIVGGFN--DDDPALYNLDPSGSIIE-EDYT 138
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDK 181
+G+ S YG+ EA +E + D+ E +A+ +A +RD +G G V I +++
Sbjct: 139 ATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGVTVVTITREE 195
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 84.6 bits (200), Expect = 1e-15
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
D V +A DKR S K+ + + + + GL D Q + L+ + LYE+
Sbjct: 35 DHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVLREEIRLYEMT 94
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
+ +++LSN+L+ +F PY ++ ++ G YD QP + +DL G E + +
Sbjct: 95 NKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGG---YDTQPRLYTLDLFGSITE-DKYT 150
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
+G+ S YG+ E + +L +E + + A+ +A RDA SG GA V +I E
Sbjct: 151 ATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGADVVVIGPQGYEE 210
Query: 185 KHV 187
K +
Sbjct: 211 KFI 213
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 84.6 bits (200), Expect = 1e-15
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
D V +ATDKR + K++++ + + + G D Q + + L LY+++
Sbjct: 16 DAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMR 75
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
R + P + +LSN+L+ R P+ + +I G D + + ++D +G NE + F
Sbjct: 76 TGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAK-LFSLDPLGGMNEEKTFT 134
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKI 182
+G+ S YG+ EA ++ ++ +E + AL +A +RD SG G + +I KD +
Sbjct: 135 ATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGV 192
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 82.6 bits (195), Expect = 5e-15
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V A++KR VS K F + P + GL D Q + ++ + +++
Sbjct: 19 VVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQIAALAKIRKMELK 78
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
R + P T + M+SN++YERR+ P + ++ G+ ++P + +D +G P+++
Sbjct: 79 RDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPLGSV-LPDEYAAV 134
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
GT +E G+ + ++PN+ DE + +A+ A+ RD+ SG G V +I KD E
Sbjct: 135 GTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGVDVLVITKDGTEE 192
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 81.4 bits (192), Expect = 1e-14
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D +A+D R S + PK +++ T +G G D T+ + ++ R+ +Y+
Sbjct: 42 GEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYK 101
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
N+ M +AMLS +LY RRF PY++ +I GLD + + V + D +G + +
Sbjct: 102 HSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSFDPVG-SYQRDT 159
Query: 123 FVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 173
+ G+ S L + E + + L ++ + + ++AA+RD +G
Sbjct: 160 YKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALK 219
Query: 174 VYIIEKDKITEKHVKTRMD 192
+ II K+ I E+ V R D
Sbjct: 220 ICIITKEGIREEIVPLRKD 238
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 80.6 bits (190), Expect = 2e-14
Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V +A DKR +S NF K+F + + + GL D + + ++ +M L L
Sbjct: 14 EDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIVEGQMRLASL 73
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ + + + LS+LLY +F P+ +E ++ G+DP +P + +D +G E ED+
Sbjct: 74 ETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYVLDPLGSIIE-EDY 131
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYII 177
V +GT + +G+ E +++ + +E + +AL + RDA +G G V ++
Sbjct: 132 VAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTGDGIDVLVL 185
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 80.2 bits (189), Expect = 3e-14
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K D V +ATD R + S + KV ++ P + + G + Q + LK +L
Sbjct: 55 IKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTLKAETSL 114
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YE + + M + S + NLL F Y ++P++ G+D D ++ ++D +G E
Sbjct: 115 YETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVD--DEGSHIYSIDALGGTTE- 169
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
E++ V+G+ S+ G+ E ++ ++ DE ++A+ +A +RD SG G V ++ D
Sbjct: 170 EEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASGNGINVAVVTDD 229
Query: 181 KI 182
+
Sbjct: 230 GV 231
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 80.2 bits (189), Expect = 3e-14
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V +A D+R K+ ++ + + GL D Q + + L + YE+
Sbjct: 24 RDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEWLANHTHYYEI 83
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
R M + LS +L+ +F PY ++ ++ G YD QP + N+D G E E +
Sbjct: 84 VNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGG---YDTQPRLYNIDWFGSVTE-EKY 139
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
V +G+ S G+ E + PNL +E E +A+ ++ RD +G G V +I KD
Sbjct: 140 VATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVDVVVIGKD 196
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus
anatinus
Length = 181
Score = 78.6 bits (185), Expect = 9e-14
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 50
MKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 38 MKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 87
Score = 69.7 bits (163), Expect = 4e-11
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 130 SEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITEKHVKT 189
S+ + CE+ +P+ LFETISQA++NA DRDA+SG G VV++IEK+KIT + +K
Sbjct: 122 SQSPHARCES---SRREPEHLFETISQAMLNAVDRDAVSGMGVVVHVIEKNKITTRTLKA 178
Query: 190 RMD 192
RMD
Sbjct: 179 RMD 181
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 78.2 bits (184), Expect = 1e-13
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D +A+D R + + PK +++ +G G D T+ + ++ R+ +Y+
Sbjct: 45 GEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYK 104
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
N+ M +AMLS +LY RRF PY++ +I GLD + + V + D +G + +
Sbjct: 105 HSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFDPVG-SYQRDS 162
Query: 123 FVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV 173
F G+ S L + + + L D + ++AA+RD +G
Sbjct: 163 FKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALR 222
Query: 174 VYIIEKDKITEKHVKTRMD 192
+ I+ K+ I E+ V R D
Sbjct: 223 ICIVTKEGIREETVSLRKD 241
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 76.2 bits (179), Expect = 5e-13
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V +AT++R ++ + N K+FQ+ + + GL D Q + + +K + LY L
Sbjct: 17 KDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRL 76
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ M + + +LSN+L + ++ PY ++ ++ G+ D P+V ++D G E + +
Sbjct: 77 QRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI---DTAPHVFSIDAAGGSVE-DIY 132
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+G+ S +YG+ E+ + + DE + + +A+ A RD+ SG V +I +
Sbjct: 133 ASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 188
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 74.9 bits (176), Expect = 1e-12
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K + V IA +KR +S N KV + + +G GL D Q + + L+
Sbjct: 23 IKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRMEAEN 82
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YEL+ R +R + + +LS +LY + P E V+ G D Q YV +D +G E
Sbjct: 83 YELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYV--LDPVGSLIE- 139
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+ +V G+ G+ E + ++ DE + A+ A +RDA+SG G V I ++
Sbjct: 140 DKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDVLRITEE 199
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 72.5 bits (170), Expect = 6e-12
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D IA D R S K+F++ P +G G DT ++ +K RM YE
Sbjct: 37 GDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYE 96
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG-CPNEPE 121
R M + + MLS +Y RRF PY++ ++AG+D + + V + D IG C E
Sbjct: 97 HTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDPIGHC--EKA 153
Query: 122 DFVVSGTCSEQLYGMCE-ALWEPN----------LKPDELFETISQALVNAADRDAISGW 170
+ GT L + + + N L + S ++AA+RD +G
Sbjct: 154 TYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGD 213
Query: 171 GAVVYIIEKDKITEKHVKTRMD 192
++ II KD I + + R D
Sbjct: 214 SVLINIITKDGIEVRTLTLRQD 235
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 72.1 bits (169), Expect = 8e-12
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A++KR VS N K FQ+ P + GL D Q + ++ + ++
Sbjct: 15 VILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQISALAKIRKMDLK 74
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
R + P + + M+SN++YERRF P + ++ G+ +P + +D +G P+++
Sbjct: 75 RDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV---VGEPAIYTLDSLGSV-LPDEYAAV 130
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
GT +E G+ + ++ + + + + + +AA RD+ SG G + ++ + E
Sbjct: 131 GTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDGLDILALDANGARE 188
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 70.5 bits (165), Expect = 2e-11
Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K D + +A+++R +S KV+++ L G G+ D QT+ + + +
Sbjct: 11 LKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMNVEIKY 69
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YE+ + + + +LS +LY+ + P+ E + G+D Q YV +D IG E
Sbjct: 70 YEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYV--LDPIGSLIE- 126
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+++ G+ + G+ E+ ++PN+ D + I++A+ + +RD SG G + II+K
Sbjct: 127 DNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDGIDLAIIDK 185
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 70.1 bits (164), Expect = 3e-11
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 9 IATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENR 67
IA D R Q + T F K+F++ +G G+ D + L+ ++ LY NR
Sbjct: 29 IAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSVLERQIELYRYTHNR 87
Query: 68 MMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSG 127
+ +LS +LY RRF PY+ ++ G+D + VC D +G N E + G
Sbjct: 88 EPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDE-QGKGVVCGYDAVGNYNY-EKYTAQG 145
Query: 128 TCSEQLYGMCEALWEPN---LKP-----DELFETISQALVNAADRDAISGWGAVVYIIEK 179
T S + + + L N +KP ++L + A+V+A +RD +G A + I +
Sbjct: 146 TSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVERDICTGDSAELVICDG 205
Query: 180 DKITEKHVKTRMD 192
+ H+ R+D
Sbjct: 206 VVMEPVHMDLRID 218
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 69.7 bits (163), Expect = 4e-11
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K +D V +A+DK+ + K+ + + + G D Q + + LK + L
Sbjct: 7 IKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKL 66
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY-VCNMDLIGCPNE 119
EL R M + +LS+LLY+ RF + +IAG P +++ + + ++D IG +E
Sbjct: 67 RELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAG--PINSKEFGIYSLDGIGAISE 124
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+D+ G+ G EA + P++ + + +AL ++ RD SG+G +Y I K
Sbjct: 125 IKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYGIEIYTITK 184
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 69.3 bits (162), Expect = 5e-11
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 4 QDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
QD V +A+D R + + +S N KV ++ P + + G Q+ + L+ NLYE
Sbjct: 69 QDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRSLRAEANLYE 128
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
+ M S M SNLL R GP+F + P++ G+D D+ +V ++D G + +
Sbjct: 129 ARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVD--DDGGHVFSLDPAG-SSMSD 182
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDK 181
+ G+ G+ E + +L + + + A+ +A++RD SG G + I D
Sbjct: 183 TYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGIHITKITHDG 242
Query: 182 IT 183
+T
Sbjct: 243 LT 244
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 68.9 bits (161), Expect = 7e-11
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D IA D R +S N KVF + + G+ D Q + + +K Y
Sbjct: 63 GPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKHMKIESTEYY 122
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
LK + + + F +LS ++Y RR P++ ++AG+D + + V + D+IG
Sbjct: 123 LKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDS-EGRGAVYSYDVIGSTLRTR- 180
Query: 123 FVVSGTCSEQLYGMC-EALWEPN---LKPDELFETISQALVNAADRDAISGWGAVVYIIE 178
+ +GT + + + EA+ N + + FE I A + A+RD +G V I
Sbjct: 181 YGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSCAERDIYTGDSVVAMCIS 240
Query: 179 KDKITEKHVKTRMD 192
D I E+ + R D
Sbjct: 241 ADGIQERTFELRKD 254
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 68.5 bits (160), Expect = 1e-10
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K D V I D R + A S K+ Q+ ++V G + DTQ + L+ +++
Sbjct: 16 IKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYLRMYLSM 75
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
Y E+ + + + +A+ S ++YE P + +I YD++P V N+ L G E
Sbjct: 76 YSQLEDSIPQVQRAAALASKIIYE---NPSLLAGLIVA--GYDDKPRVFNISLGGSLTE- 129
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
D+ + G+ S +YG C+ W + +E + A+ A +RD SG
Sbjct: 130 RDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNASG 178
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 68.1 bits (159), Expect = 1e-10
Identities = 42/177 (23%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V A+++R + K+F++ + + G D Q + + ++ ++LY++
Sbjct: 17 KDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKIIEAEVSLYQM 76
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ N + K +++ +N+L R GP +++ ++ G+D ++P + ++D G E + +
Sbjct: 77 RNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMD--GDKPSLYSLDPAGGMIE-DTY 130
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+ +G+ S YG+ E + + DE E +A+ A++RD SG G +V + KD
Sbjct: 131 ISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVAKVTKD 187
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 67.7 bits (158), Expect = 2e-10
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
++G V +A +KR +S KV+++ L + L GL D Q + + L+ +
Sbjct: 14 IRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKILRAEIEY 73
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
Y + R + + + +L+ +LY ++ P+ E ++ GL+ D + MD +G E
Sbjct: 74 YNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEA-DGTAKLYVMDPLGSLIE- 131
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+D+ G+ + G+ E + ++ D+ + A+ A +RDA+SG G + +I ++
Sbjct: 132 DDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSGDGIDLLVIRRE 191
Query: 181 K 181
+
Sbjct: 192 E 192
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 67.7 bits (158), Expect = 2e-10
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
D V +A D+R + KV + + + G D Q ++ LK + +
Sbjct: 24 DGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKNIYHYNSIT 83
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
+ + K + L+N+L ++ PY ++ +I G YD+QP + N+D +G E E++V
Sbjct: 84 KYGPISIKGIATRLANVLSATKYFPYIVQILIGG---YDDQPRLFNLDYLGDITE-ENYV 139
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 174
+G+ S G+ E + P + DE + +A+ +A RD+ +G G +V
Sbjct: 140 ATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 189
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 67.3 bits (157), Expect = 2e-10
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+KG+D V IA+D R ++ N K++ + G+ D + + ++K +
Sbjct: 34 IKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQIKAHIKN 93
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
Y+ + + M ++ + +LSN LY RF PY+ ++AG++ + N D +G E
Sbjct: 94 YKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINS-KGKAVTYNYDAVG-SFEE 151
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKP---DELFETISQALVNAADRDAISGWGAVVYII 177
+ SG+ E Y + ++L + +P E + +A +RD +G + I+
Sbjct: 152 RKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVIL 211
Query: 178 EKDKITEK 185
+ I ++
Sbjct: 212 NSNGIRKE 219
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 66.1 bits (154), Expect = 5e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 86 RFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVV 125
RFGPY+ EPVIAGLDP +P++C++DLIGCP +DFVV
Sbjct: 65 RFGPYYTEPVIAGLDPTTFEPFICSLDLIGCPMVTDDFVV 104
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 65.3 bits (152), Expect = 9e-10
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D +A D R S PKVF +G + V G + D + + +K + LY
Sbjct: 42 GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIENIKQHVELYH 101
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
+ N+ ++ ++ + + ++LY +RF PY++ +IAGLD + + V + D +G E E
Sbjct: 102 YQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDE-EGKGAVYSYDPVG-SYEREF 159
Query: 123 FVVSGTCSEQLYGMCEALWE---------PNLKPDELFETISQALVNAADRDAISGWGAV 173
G+ + + ++ P L +E + + A +A +R G G
Sbjct: 160 CRAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDAFSSATERHIHVGDGLE 219
Query: 174 VYIIEKDKITEKHVKTRMD 192
+ I+ K+ + ++ + D
Sbjct: 220 ILIVTKEGVRKEFFPLKRD 238
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 64.5 bits (150), Expect = 2e-09
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
D V +A D+R + + N K+ ++ L + G D + + L+ LY +
Sbjct: 20 DGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQ 79
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
+ M K + +L+N+L R PY ++ G +D +P + ++D++G E + +V
Sbjct: 80 SGKRMSVKALATLLANMLNGARMLPYLAWFLVGG---FDEKPRLYSVDMMGGITE-DKYV 135
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
+G+ E Y + ++ + +LK E + +A+ +A RD SG G +V I ++ E
Sbjct: 136 AAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEGYRE 195
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 64.1 bits (149), Expect = 2e-09
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
D V +A DKR VS + K+ ++ +++ G+ D + ++L R+++Y+
Sbjct: 53 DFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSKQLSARLHMYKYN 112
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
+ + +++LS LY +RF PY+ ++AG D + V N D +G + + +
Sbjct: 113 NGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDD-KGEGLVINYDAVG-SGDFKKYA 170
Query: 125 VSGTCSEQLYGMCEALWE--PNLKPDELF---ETIS---QALVNAADRDAISGWGAVVYI 176
V G+ ++ + + + +E +K ++L E IS +A +RD +G + I
Sbjct: 171 VLGSGAQLITPVFDQYFEGYNKIKKEQLHTVEEFISFIVDCFESATERDIYTGDQLEIVI 230
Query: 177 IEKDKITE 184
+ KDK E
Sbjct: 231 LRKDKAPE 238
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 64.1 bits (149), Expect = 2e-09
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D V +A D R + + + PK+ ++ +G G+ +D +T+ LK ++ L+
Sbjct: 46 GKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSLLKKKIELFV 105
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE-PE 121
L+ + +L +LY RRF PY+ ++AG+ D++ + N D IG E
Sbjct: 106 LEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVS-NDSKGVLYNYDAIGSYCEATH 164
Query: 122 DFVVSGTC------SEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 175
V SG+ ++ + + N + + + A+ +A +RD +G +Y
Sbjct: 165 SCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDLDFVKDAITSATERDIYTGDSTEIY 224
Query: 176 IIEKDKITEKHVKTRMD 192
II++ + ++ + D
Sbjct: 225 IIDQMGVNTTSLELKQD 241
>UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;
Eukaryota|Rep: Proteasomal subunit beta type III - Mus
musculus (Mouse)
Length = 48
Score = 62.9 bits (146), Expect = 5e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Query: 10 ATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 50
A D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 48
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 62.5 bits (145), Expect = 6e-09
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D V IA D R + S + K Q+ + G+ D + + L ++ LYE
Sbjct: 52 GDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKTLLAKVKLYE 111
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
+ N+ + +LS +LY +RF PY+ +++GLD + V D +G ++
Sbjct: 112 FEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE-QGKGVVYGYDAVGSFDQ-HK 169
Query: 123 FVVSGT--------CSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 174
FV G+ Q+ G + +E ++ + + ++ +A++RD +G A V
Sbjct: 170 FVALGSGGSLITSILDNQISGNNQTSFE-SIDKVGIINIVKDSITSASERDVHTGDSAEV 228
Query: 175 YIIEKDKITEKHVKTRMD 192
+I+ I+ ++ R D
Sbjct: 229 IVIDSSGISVSSLRLRED 246
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 61.7 bits (143), Expect = 1e-08
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V +A D + + + N K+ + + + G D Q + + L+ Y+
Sbjct: 15 KDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARILEAEARYYQF 74
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
R M + + +LSN+L E ++ PY ++ +I G Y ++P + N+D +G +D+
Sbjct: 75 TWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGG---YVDEPTIANLDPLG-GLIFDDY 130
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAV-VYIIEKDKI 182
+G+ + + E + NL ++ E +A+ A RD +G + V I KD +
Sbjct: 131 TATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYTGSKKIQVVTITKDGM 190
Query: 183 TEKHV 187
E+ V
Sbjct: 191 KEEFV 195
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 61.3 bits (142), Expect = 1e-08
Identities = 43/200 (21%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTN-FPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
G+D IA D R + T + K+FQ+ + G+ DT + +RLK + +
Sbjct: 38 GKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQKRLKSMLESF 97
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
E + + M + LSN LY +RF PY+ ++AG+D + ++ D +G +
Sbjct: 98 EKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE-QGEGWIWTYDAVGSHERVK 156
Query: 122 -------DFVVSGTCSEQLYGMCEALWEPN--LKPDELFETISQALVNAADRDAISGWGA 172
+ +V Q+ + + E N + +++ + ++ +A +RD +G A
Sbjct: 157 YSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDSITSAGERDIYTGDFA 216
Query: 173 VVYIIEKDKITEKHVKTRMD 192
+ +++K+ + + + ++D
Sbjct: 217 DIVVVDKNGVHWEKFELKLD 236
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 59.3 bits (137), Expect = 6e-08
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K D + +A D R S K+FQ+G L G G DT V+ ++ + +
Sbjct: 96 LKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTGT-GFYADTHEVYVKMVYEIRQ 154
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
YE+ ++ + + + +LS +LY +RF PY+ V++G + +PYV + D IG
Sbjct: 155 YEVDDS--INIHSAANLLSKILYSKRFFPYYSFCVLSGFE--KGKPYVYSYDPIGSFGS- 209
Query: 121 EDFVVSGTCSEQLYGMCEAL-----W----EPNLKPDELFETISQALVNAADRDAISGWG 171
V SG+ + + ++ W E L ++ + +A +AA+RD +
Sbjct: 210 VTCVCSGSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAERDVKTKDN 269
Query: 172 AVVYIIEKDKITEKHVKTRMD 192
V ++ ++++ + R D
Sbjct: 270 LEVCVMRENQVMRETFPLRRD 290
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 58.4 bits (135), Expect = 1e-07
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D R + S + K+ ++ P + + G A D Q + L + L+EL
Sbjct: 69 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 128
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
R + S +L+N+LY R + +IAG D + P + +D G + + F V
Sbjct: 129 RRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD--ETGPGLYYVDNEGGRLKGDRFSV- 185
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 175
G+ S YG+ ++ ++ ++ +E E +++ +A RD SG A VY
Sbjct: 186 GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVY 234
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 58.0 bits (134), Expect = 1e-07
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
G+D +A D R I ++++ + PKVF G + + G A D + +R K + Y
Sbjct: 36 GEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWY 94
Query: 62 ELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
N + + + + + +LLY +RF PY++ +IAGLD D + V + D +G E
Sbjct: 95 HFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSFDPVG-SYER 152
Query: 121 EDFVVSGTCSEQLYGMCE------ALWEPN-----------LKPDELFETISQALVNAAD 163
E G + + + +EP L +E+ + + + +A +
Sbjct: 153 EQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATE 212
Query: 164 RDAISGWGAVVYIIEKDKITEKHVKTRMD 192
R G G + I+ KD + ++ + + D
Sbjct: 213 RHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
G+D IA D R + ++ T + KV+Q+ + + G A D +R+K R+ Y
Sbjct: 39 GKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVKRVKQRLEWY 97
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
E N+ M K+ + M+ +LY +RF PY++ ++ G++ D V + D +G
Sbjct: 98 EHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE-DGSGAVYSFDPVG 150
>UniRef50_A7DQ84 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 210
Score = 57.6 bits (133), Expect = 2e-07
Identities = 40/180 (22%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K +D V + D R + N K+ ++ + L G D Q + L++ NL
Sbjct: 18 IKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDILRYHSNL 77
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
+ ++++ + + + + S + ++ R P+ + ++ G D P + N+D+ G E
Sbjct: 78 HRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA--EGPALFNIDMFGSV-EK 134
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+ +V +G+ S YG+ E + +L +E + +A+ A R+ +G G + I++KD
Sbjct: 135 KAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAIMDKD 194
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D IA D R +S ++ K+ ++ + G D + + + LK R +Y+
Sbjct: 23 GSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQ 82
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
+ N+ M + +LSN LY +RF PY+ V+ GLD + + V D +G
Sbjct: 83 HQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDAVG 134
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 56.8 bits (131), Expect = 3e-07
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D +A D R + ++ + K+ ++ + G D + + + L R LY+
Sbjct: 21 GADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQ 80
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
+ N+ M + +LSN LY +RF PY+ V+ GLD + + V D +G E
Sbjct: 81 HQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDAVG-SYERTG 138
Query: 123 FVVSGTCSEQLYGMCE-ALWEPN------------LKPDELFETISQALVNAADRDAISG 169
+ GT S + + + L P+ L E + + +A +RD +G
Sbjct: 139 YSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTG 198
Query: 170 WGAVVYIIEKDKITEKHVKTRMD 192
+ +I K +++ R D
Sbjct: 199 DKLEIVVINKAGTKREYIDLRKD 221
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 56.4 bits (130), Expect = 4e-07
Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGP----TLYVGLPGLATDTQTVFQRLK 55
+ G D +A D R ++T + PKVF + ++ + + G A D + + +RL
Sbjct: 20 VSGPDFAILAGDTR-STAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGRALKERLD 78
Query: 56 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
+ +Y+ + + + + + +S +LYE+RF PY ++ ++AG+D D Q + D G
Sbjct: 79 AIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDA-DGQGAIYYYDPAG 137
Query: 116 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDEL---FETISQALVNAADRDAISGWGA 172
C E +G S + ++ P L+P L + + A A +R G
Sbjct: 138 C-IEKRSHCAAGEASSLMLPFLDS-QAPRLQPLSLQTAQQLVRDAYTGATERHIEVGDHL 195
Query: 173 VVYIIEKDKITEKHVKTRMD 192
+ ++ ++ ++E+ V + D
Sbjct: 196 QMLVVTREGVSEQLVDLKKD 215
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 56.4 bits (130), Expect = 4e-07
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 3 GQDCVAIATDKRF-GIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
G + V + D R G ++ K+F++ +++ G+ D + Q LK+R+ Y
Sbjct: 60 GSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWY 119
Query: 62 ELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVC-NMDLIGCPNE 119
+ ++ K + + S +LY+RRF PY+ +I G+D + VC + D +G E
Sbjct: 120 QYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID--EKGAGVCYSYDPVG-STE 176
Query: 120 PEDFVVSGTCSEQLYGMCEALW---------EPNLKPDELFETISQALVNAADRDAISGW 170
P + G+ S + + + L +L +E + A AA+RD +G
Sbjct: 177 PFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGD 236
Query: 171 GAVVYIIEKDKITEKHVKTRMD 192
+II D + + + R D
Sbjct: 237 TVCFHIITADGVGTEMFELRKD 258
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 55.2 bits (127), Expect = 9e-07
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 2 KGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
K Q V A D R + + KV ++ P L + G A D Q + L LY
Sbjct: 79 KFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLY 138
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
L+ + S +LSN++ + R + +I G D P + +D G
Sbjct: 139 YLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK--KGPGLYYVDEHGTRLSGN 196
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
F +G+ + YG+ ++ + PNL P+E ++ +A+ A RD+ SG +Y +++D
Sbjct: 197 MFS-TGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKED 254
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 54.0 bits (124), Expect = 2e-06
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V + D R + K+ Q+ +YV G A D+Q V +++ ++ + ++
Sbjct: 24 VVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHG 83
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ K + ++ L Y + ++ G D Y+ + + L G E + F +
Sbjct: 84 QPATVKVSANLIRMLAYNNK-NMLQTGLIVGGWDKYEGGK-IYGIPLGGTVVE-QPFAIG 140
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKIT 183
G+ S LYG + W+ N+ +E + + +A+ A RD SG II + +T
Sbjct: 141 GSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEGVT 197
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 54.0 bits (124), Expect = 2e-06
Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 3/183 (1%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
QD V +A+ K + + K Q+ P + G A DT + ++ + LY +
Sbjct: 10 QDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSI 69
Query: 64 KENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
+E+ + P+ S+ + L + R PY + +I G D N+P + +D +G E
Sbjct: 70 REDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVE-L 128
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDK 181
+ G + + + + P++ +E + + + R + G +V I++KD
Sbjct: 129 PYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDG 188
Query: 182 ITE 184
I +
Sbjct: 189 IRQ 191
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 53.2 bits (122), Expect = 4e-06
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPT--------LYVGLPGLATDTQTVFQR 53
G+D +A D R + ++T + PK+F++G L + + G A D + + +R
Sbjct: 49 GKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFAADGRALKER 107
Query: 54 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 113
L + +Y+ K + M + L+ +LY +RF PY++ ++AG+D D + + + D
Sbjct: 108 LDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDE-DGKGALYSYDP 166
Query: 114 IG 115
+G
Sbjct: 167 VG 168
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 52.8 bits (121), Expect = 5e-06
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 3/179 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V + D R + KV + +Y G A DTQT+ +++ ++++ ++
Sbjct: 37 VLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYVRYYLDVHSMELQ 96
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
R KT + + SNL+Y+ + ++AG+D + C + +
Sbjct: 97 RRPTVKTAAKLFSNLIYQYQ-DNLSAAVIVAGIDDNEGPSIYACQPSGSCIK--QQVAIG 153
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITEK 185
G+ S ++ +A + PN+ + + + AL +A RD SG + I KD +T +
Sbjct: 154 GSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGSSGGIIRLVNITKDNVTRE 212
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 52.4 bits (120), Expect = 7e-06
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D R A S KV ++ P L + G A D + L + +YEL+
Sbjct: 16 VIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNK 75
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ S +L+N++Y+ + + +I G D P + +D G F V
Sbjct: 76 ERISVAAASKLLANMVYQYKGMGLSMGTMICGWD--KRGPGLYYVDSEGNRISGATFSV- 132
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
G+ S YG+ + + +L+ ++ ++ +A+ A RDA SG +Y + +D
Sbjct: 133 GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVRED 186
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 52.4 bits (120), Expect = 7e-06
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL-KE 65
V +A D + N +VF++ + +G G D Q++ + + +M + +
Sbjct: 69 VMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDD 128
Query: 66 NRMMRPKTFSAMLSNLLYER--RFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
N M+PK+ ++ ++ +LY R R P +I+ V+ G+D + PY+ N+DL G ED+
Sbjct: 129 NIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVD-NEGTPYLANVDLRG--RSYEDY 185
Query: 124 VVS 126
VV+
Sbjct: 186 VVA 188
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 51.6 bits (118), Expect = 1e-05
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 8/172 (4%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V + +D R V+ F K+ + +Y L G A D Q V +++ L+ ++
Sbjct: 32 VVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELE 91
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN-QPYVCNMDLIGCPNEPEDFVV 125
+ ++ N+ Y+ R ++AG D + Q Y +G + F +
Sbjct: 92 EPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVY----GTLGGMLTRQPFAI 146
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYII 177
G+ S +YG +A ++P + P+E + A+ A RD S G V+Y++
Sbjct: 147 GGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSS--GGVIYLV 196
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 51.2 bits (117), Expect = 2e-05
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
Q V +A D R + S K+ Q+ L + G A D + L LYEL
Sbjct: 88 QGGVILAVDSRASQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYEL 147
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ + S M++N+ + R +IAG D + P++ +D G + F
Sbjct: 148 RNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD--KDGPHLYYVDNEGSRVKDCKF 205
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKIT 183
V G+ S YG+ ++ + +L +E + +A+V A +RD SG VY I K+ +
Sbjct: 206 SV-GSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQINKNGVI 264
Query: 184 EKHV 187
KHV
Sbjct: 265 -KHV 267
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 50.0 bits (114), Expect = 4e-05
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 5/174 (2%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V + TD R + S K+ + + V G A DTQ + K+ +++Y + EN
Sbjct: 35 VVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYTMTEN 94
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD-PYDNQPYVCNMDLIGCPNEPEDFVV 125
+ + S + LY R ++AG D Q Y IG +
Sbjct: 95 KPVTIYRSSQIFRQFLYNYR-EQLSASVLVAGWDEELGGQVYAIP---IGGFVSRQRSTA 150
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
SG+ S + G ++ W PNL +E + QA+ A RD SG + +I K
Sbjct: 151 SGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVRLAVINK 204
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 50.0 bits (114), Expect = 4e-05
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G D V I D R + S + ++F+M + G D R++ + YE
Sbjct: 28 GDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITRMRSILLNYE 87
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 100
+ M ++ + +SN LY +RF PY+I ++ G++
Sbjct: 88 NQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGIN 125
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 49.6 bits (113), Expect = 5e-05
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D R +S + K+ Q+ + G D + + L+ R+ LYE +
Sbjct: 48 VIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKFLQQRLQLYEFQNE 107
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE------- 119
+T + +LS LY RRF PY+ ++AGLD +N V D IG ++
Sbjct: 108 VQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDE-NNHGVVYGYDAIGSYDQMTYGVQG 166
Query: 120 -PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIE 178
++ VV+ QL G + +E+ + I AA+RD +G + II
Sbjct: 167 SGQELVVA-VLDNQLKGYNKINKTIPQTREEILDIILDCFSCAAERDIHTGDNVEILIIT 225
Query: 179 KDKITEKHVK 188
TE+ VK
Sbjct: 226 AAG-TERIVK 234
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 48.8 bits (111), Expect = 8e-05
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELK 64
DCV + D R + K+ ++ ++ G A D V ++ + L +L+
Sbjct: 51 DCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLIEGNLELQKLQ 110
Query: 65 ENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFV 124
NR R +MLS+ LY+ + G ++AG D N +V + GC + F
Sbjct: 111 MNRKPRVAHAVSMLSDHLYKYQ-GYIGAHLIVAGSDSTGN--FVFQVSANGCIMQ-LPFT 166
Query: 125 VSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
G+ S + EA + L E E +S A+ D SG + II+ + +
Sbjct: 167 SMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSGSNVNILIIKNNYVKH 226
Query: 185 -KHVKTR 190
+H T+
Sbjct: 227 FRHFDTK 233
>UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 200
Score = 48.0 bits (109), Expect = 1e-04
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D V +A D+R + K+ ++ + + G D Q + RL+ Y+
Sbjct: 20 GKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRLRVEARYYK 79
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
M K+ + + S +L++ R P ++ +I G+D + P + ++D +G E
Sbjct: 80 TITGDSMPVKSVATLASLILFQYR--PILSVQMLIGGVD--SDGPSLFSVDWLGTVTR-E 134
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDK 181
+ +G+ S + E + +L +E +A+ A RD SG G + I K+
Sbjct: 135 KYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSGEGVDIATITKEG 194
Query: 182 ITEKHV 187
I K V
Sbjct: 195 IRMKRV 200
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 47.6 bits (108), Expect = 2e-04
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V + D R + + K+ + ++ G A DTQ V + +++ + ++ N
Sbjct: 46 VVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELN 105
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN-QPYVCNMDLIGCPNEPEDFVV 125
T +++ + Y R +IAG DP + Q Y M G + F +
Sbjct: 106 EPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPM---GGMMVRQSFAI 161
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
G+ S +YG +A + + +E + + AL A +RD SG
Sbjct: 162 GGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSG 205
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 46.8 bits (106), Expect = 3e-04
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 2 KGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
K Q V +A D R + S KV ++ P L + G A D + L + +Y
Sbjct: 75 KFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 134
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
EL+ + S +L+N++Y+ + + ++ G D P + +D G
Sbjct: 135 ELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWD--KRGPGLYYVDSEG-NRVCG 191
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
D G+ S YG+ ++ +L +E E +A+ A RDA SG +Y + +
Sbjct: 192 DLFAVGSGSMYAYGVMDSGLRHDLSVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSE 250
>UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8;
Magnoliophyta|Rep: 20S proteasome beta subunit - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 238
Score = 46.8 bits (106), Expect = 3e-04
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 43 LATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPY 102
+A D Q + L + L+EL R + S +L+N+LY R + +IAG D
Sbjct: 69 VAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-- 126
Query: 103 DNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAA 162
+ P + +D G + F V G+ S YG+ ++ ++ ++ +E E +A+ +A
Sbjct: 127 ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHAT 185
Query: 163 DRDAISGWGAVVYII 177
RD SG A VY +
Sbjct: 186 FRDGASGGVASVYYV 200
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 46.8 bits (106), Expect = 3e-04
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 2 KGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
K ++ + +A D R + + S N K+ ++ + + G A D + L + +Y
Sbjct: 66 KFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYLGQIIKIY 125
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
EL+ N + + S +LSN+LY+ + +++G YD+ + NM I +
Sbjct: 126 ELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSG---YDHTGF--NMFYIDDEGKKV 180
Query: 122 D--FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+ G+ S Y + ++ ++ NL ++ E A+ +A RD SG V+ I K
Sbjct: 181 EGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHK 240
Query: 180 D 180
+
Sbjct: 241 N 241
>UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2;
n=2; Filobasidiella neoformans|Rep: Probable proteasome
subunit beta type-2 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 224
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D V +A+D G + ++ K+ +GP L + G DT + ++ M LY
Sbjct: 9 GKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYN 68
Query: 63 LKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
++ + + P SA + L E R PY + ++ G D ++P++ +D +G
Sbjct: 69 IRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLG 123
>UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 284
Score = 46.0 bits (104), Expect = 6e-04
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
+ +A D R S + K+ +G + + G A D Q + + LYEL+E
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ S +N LY R + ++AG D P + +D G + + V
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLSVGSMVAGYD--KKGPQIFKVDSEGDRCQLKVCSV- 199
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
G+ S YG+ + ++P + DE + +A+++A RD+ SG
Sbjct: 200 GSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSG 242
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 46.0 bits (104), Expect = 6e-04
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQRLKFRMN 59
+KG D VAIA D T+ + K+ ++G + + L G D + +K ++
Sbjct: 8 IKGPDFVAIACDTYEKYSIITIKNDDESKIMKIGDSKVMMLAGPLGDRSQFSKMIKATLD 67
Query: 60 LYELKENRMMRPKTFSAMLSNLLYER-RFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPN 118
++ K ++ + + + L E R PY ++ +IAG+D + P + +D +
Sbjct: 68 YHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGID--QDGPKLFWIDYLASCT 125
Query: 119 EPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIE 178
+ D V G L G+ + ++PN+ +E + + +R IS II+
Sbjct: 126 QA-DTAVHGYGGFLLRGLLDKEYKPNMTREEAIALLKKCRHEVQNRFLISQSNFAAKIID 184
Query: 179 KDKITEKHVK 188
KD + + +K
Sbjct: 185 KDGVHDVDIK 194
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 45.6 bits (103), Expect = 8e-04
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 69 MRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGT 128
M +AMLS +LY RRF PY+ ++AGLD P + + IG N+ E +V
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGELPTISSG--IGGKNQ-EGWVK--- 54
Query: 129 CSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITEKHVK 188
EP + D+ + ++AA+RD +G G V++++ KD E+
Sbjct: 55 -------------EP-IPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDGCKEERFP 100
Query: 189 TRMD 192
R D
Sbjct: 101 LRRD 104
>UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit beta
type 6, NTN hydrolase fold; n=3; Cryptosporidium|Rep:
Pre3p/proteasome regulatory subunit beta type 6, NTN
hydrolase fold - Cryptosporidium parvum Iowa II
Length = 248
Score = 45.6 bits (103), Expect = 8e-04
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K +D + +A D R K+ Q+ +++ G A DTQ + + ++ +
Sbjct: 57 LKYKDGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISRYVRRIVQD 116
Query: 61 YELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
+EL+ + K+ +++ + Y+ + + +IAG+DP + + V + L G E
Sbjct: 117 HELETGEDTKVKSVASVARLISYQNK-EHLLADMIIAGMDP-NGEFKVFRIPLGGTLIEG 174
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+ +SG+ S +Y M ++ + + DE + +A RD+ SG + +I K
Sbjct: 175 S-YAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIRIIVINKS 233
Query: 181 KITE 184
+ E
Sbjct: 234 GVEE 237
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 45.6 bits (103), Expect = 8e-04
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K D V IA D + + ++ ++G VG G +D Q + QRL ++ +
Sbjct: 49 LKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQI-QRLLEKLEI 107
Query: 61 YE--LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
E + ++P LS +LY RR PY+ + ++AG+D + +PYV DL G
Sbjct: 108 KEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRG 166
>UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 294
Score = 45.2 bits (102), Expect = 0.001
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 7 VAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKE 65
+ +A D R Q Q VS+ KV ++ P + + G+A D Q + L + LYEL+
Sbjct: 94 ILLAVDSR-STQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWERDLGRKCRLYELEN 152
Query: 66 NRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVV 125
+ + S + + L+ + + +I+G D N P + D G
Sbjct: 153 GERIYASSASKLFISTLHSQSGADMSVGAMISGFDS-TNHPCIYYCDSEG-TRIGGYLYG 210
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYII 177
+G+ S +G+ + ++ + ++ +A+ +A RDA+SG VY+I
Sbjct: 211 AGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNVYVI 262
>UniRef50_Q4Q1Q9 Cluster: Proteasome subunit beta type; n=8;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 302
Score = 45.2 bits (102), Expect = 0.001
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
+ +A D R S KV ++ L L G A D Q + L L+EL+
Sbjct: 111 IIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERVLGMECRLWELRNG 170
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ S +L+N+ Y R + ++AG D + P + +D G + + F V
Sbjct: 171 SRITVAAASKILANITYAYRNHGLSMGTMLAGWDEFG--PSLYYVDDKGSRVKQDLFSV- 227
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
G+ S YG+ + + +L ++ + +++ +A RD SG VY + +
Sbjct: 228 GSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYHVHE 280
>UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5;
Oligohymenophorea|Rep: Proteasome, putative -
Tetrahymena thermophila SB210
Length = 297
Score = 44.8 bits (101), Expect = 0.001
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 3/174 (1%)
Query: 2 KGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
K Q V +A D R + S K+ ++ L + G A D Q Q L Y
Sbjct: 81 KFQGGVIVAVDSRASQGSFDASETVRKIIEINDQLLGTMAGGAADCQFWEQYLAIECRKY 140
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
+L+ + S +L N+LY R + ++ G D Q Y + D G +
Sbjct: 141 QLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHEGAQLYYLDND--GQRIKGN 198
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 175
F G+ S YG+ + + NL E E +A+ +A RDA SG +Y
Sbjct: 199 IF-SCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRDAGSGGVVRIY 251
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 42 GLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDP 101
G A DTQ + + +++ ++ + + R+ T + + N LYE + ++AG DP
Sbjct: 64 GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYK-DSMSASIIVAGWDP 122
Query: 102 YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNA 161
Y P + + L G E + + + G+ S ++G C++ ++ L + A+ +A
Sbjct: 123 YKG-PQIFTLPLGGSVIE-QKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLHAVAHA 180
Query: 162 ADRDAISG 169
RD SG
Sbjct: 181 MFRDGSSG 188
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 44.4 bits (100), Expect = 0.002
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D+R + S + KVF +G+ G A + + + + YE E
Sbjct: 113 VLMAGDRRATMGNIIASRHIEKVFPADEYSVLGIAGTAGLAIDITRLFQVELEHYEKIEG 172
Query: 67 RMM----RPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
++ + AM+ L G I P+ AG D + + D+ G E +
Sbjct: 173 TLLSLVGKANRLGAMIRGNLPMAMQGMAVI-PLFAGFDQVAGVGRLFSYDVTGGRYEELE 231
Query: 123 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
G+ S G + LW+PNL ++ +AL +AAD D+ +G
Sbjct: 232 HHSVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAADDDSATG 278
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 44.4 bits (100), Expect = 0.002
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 5/188 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRM-- 58
MK + V ++ D R + V PKV + +Y + G + Q + ++ +
Sbjct: 1 MKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEVRAHLMT 60
Query: 59 NLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCP 117
+L N M P +A +Y ++ + I G DN + C +IG
Sbjct: 61 QQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILG--GVDNTGFHCINSMIGGS 118
Query: 118 NEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYII 177
ED+ +SG+ + G+ + L+ P L E + L A D SG +
Sbjct: 119 VLEEDYAISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLKTAISLDTKSGGFMRFVAV 178
Query: 178 EKDKITEK 185
E+D + E+
Sbjct: 179 EQDGLAEE 186
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+K +D + +ATD + + ++ Q G +G G +D Q V L +
Sbjct: 54 IKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDWQYVQHMLNKLITS 113
Query: 61 YELK-ENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
++ + + P A L+ ++Y+RR P + V+ G+DP D P++ +DL+G
Sbjct: 114 EDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDGTPFLGYVDLLG 171
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 44.0 bits (99), Expect = 0.002
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 3/174 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
+ +A D R A S + K + + + G A D + L + L+EL+
Sbjct: 50 IIVAVDSRATRGAFISSGSVQKYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNK 109
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ S ML+N+LY+ R + +I G D P++ ++ G P
Sbjct: 110 PPISVAAASKMLANILYQYRNYNLSVGSMICGYDK--TGPHIFYVE-DGGVRIPGHLFSV 166
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
G+ S + ++ ++ N+ ++ E +A+ +A RD SG V I+KD
Sbjct: 167 GSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKD 220
>UniRef50_A2DD57 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 256
Score = 44.0 bits (99), Expect = 0.002
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
+ +A D R S K+ + P + + G A D Q + L + L++ +
Sbjct: 65 IVVAVDSRATGGQFIFSQTVMKILPLAPNMIGTMAGGAADCQYWLRNLSRLIQLHKFRYQ 124
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ-PYVCNMDLIGCPNEPEDFVV 125
+ + S +L N LY + I +I G YDN P++ +D G + F V
Sbjct: 125 QPLTVAAASKILVNELYRYKGYNLSIGSMICG---YDNTGPHIFYIDNHGSRIAGKRFSV 181
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWG-AVVYIIE 178
G+ S YG+ + + ++ +E E +A+ +A RD+ SG +VV+I +
Sbjct: 182 -GSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRDSGSGGRVSVVHITQ 234
>UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 283
Score = 43.6 bits (98), Expect = 0.003
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 3/163 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D R V+ K+ ++ +Y G A DTQ + +R+ + Y+
Sbjct: 66 VVLAADSRTSSGTYVVNRASNKLTKLTEKIYCCRSGSAADTQALAERVSNYLGSYQTDIG 125
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ T + + + Y R+ ++AG DP + C D+ +
Sbjct: 126 ADVNVATAANLFHKMCYVNRWN-ISAGIIVAGYDPINGGSVYSIPSGGSCVKL--DYALG 182
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
G+ S LY +A ++P + E +A+ +A RD SG
Sbjct: 183 GSGSIFLYSFFDANYKPGMSKSECVAFCQRAVAHAYSRDGSSG 225
>UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=35;
Eukaryota|Rep: Proteasome component PRE3 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 215
Score = 43.2 bits (97), Expect = 0.004
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V + D R A + K+ ++ ++ G A DTQ + +++ + LY
Sbjct: 28 KDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELY-T 86
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ +T +++ L YE + ++AG D N+ V + L G ++ +
Sbjct: 87 SQYGTPSTETAASVFKELCYENK-DNLTAGIIVAGYDD-KNKGEVYTIPLGGSVHK-LPY 143
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
++G+ S +YG C+ + N+ +E + I +L A D SG
Sbjct: 144 AIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSG 189
>UniRef50_Q4UI67 Cluster: Proteasome subunit beta type; n=3;
Piroplasmida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 270
Score = 42.7 bits (96), Expect = 0.005
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D R + + N KV ++ L + G A D + L L+EL+
Sbjct: 67 VILAVDSRASMGPIVSTQNVSKVIEINSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQ 126
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
+ S +L+N+ Y + +IAG D N P + + G + + F V
Sbjct: 127 CRISVGAASQILANIFYYFKGYGLSAGTMIAGYDL--NGPGLYYVSSEGERVKGKLFSV- 183
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKITE 184
G+ S YG+ + + N+ +E E ++A+ A RD SG +Y + KD T+
Sbjct: 184 GSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDGFSGGFVNLYHVHKDGWTK 241
>UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 41.9 bits (94), Expect = 0.009
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 2 KGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLY 61
KGQ V +A D R + K+ ++ P +Y G G A D + ++ ++
Sbjct: 35 KGQT-VVLACDSRATVGPIVADKACMKLHKLAPNIYCGGAGTAADLTHATNFIATKLGVH 93
Query: 62 ELKENRMMRPKTFSAMLSNLL--YERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
+M R T ML L Y G Y V+ G D Y ++ + G ++
Sbjct: 94 RFTIGQMPRVDTAVTMLKRHLFPYGGHIGAYL---VVGGYD-YTG-AHLWGVYADGSTSQ 148
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
++ G+ S M + W NL +E + +QA++ D SG V +I+K
Sbjct: 149 -HNYYSLGSGSIAATTMLDDQWNENLTREEGVKLATQAILAGIFNDMGSGGRVNVCVIDK 207
Query: 180 DKITEK 185
+ + EK
Sbjct: 208 NGVEEK 213
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 41.9 bits (94), Expect = 0.009
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 14/204 (6%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQ-MGPTLYVGLPGLATDTQTVFQRLKFRMN 59
+ G++ +A+D R + T + Q + + + G D + + L+ R++
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 60 LYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
Y M + +LS LY RRF PY+ ++AG+D + + V + D IGC E
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH-GKGAVFSYDPIGC-IE 174
Query: 120 PEDFVVSGT----------CSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
+ SG C + E P L D + + AA+R+ +G
Sbjct: 175 RLGYSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLDRAISLMKDSFRGAAEREISTG 234
Query: 170 WGAVVYIIEKDK-ITEKHVKTRMD 192
+ I E K + K + R D
Sbjct: 235 DKIHLVIAEAGKPVVVKFLPLRED 258
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 41.1 bits (92), Expect = 0.017
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 54 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 113
LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 3 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDA 61
Query: 114 IG 115
+G
Sbjct: 62 VG 63
>UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4;
Endopterygota|Rep: Proteasome subunit beta type -
Anopheles gambiae str. PEST
Length = 271
Score = 41.1 bits (92), Expect = 0.017
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE- 62
+D V IA DK + + +V+++ +G+ G D Q + + + ++ +
Sbjct: 67 KDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFADFQYIKRHIDQKVIDDQC 126
Query: 63 LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNMDLIG 115
L + M+P++F L+ ++Y RR F P +++ VI G+ D +P++ +++L G
Sbjct: 127 LDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGMQ--DGEPFLGHVNLRG 179
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 41.1 bits (92), Expect = 0.017
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 4/176 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V + D R N K+ M P +Y G A DT+ V + ++ L+
Sbjct: 48 KDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRY 107
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
+ R R T +L L+ + G V+ G+D P++ + G + F
Sbjct: 108 QTGRDSRVVTALTLLKKHLFSYQ-GHVSAALVLGGVD--ITGPHLHTIYPHG-STDTLPF 163
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
G+ S + EA ++ L DE + +++A+ + D SG + +I K
Sbjct: 164 ATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITK 219
>UniRef50_UPI0000499A92 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 198
Score = 40.7 bits (91), Expect = 0.022
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV--FQRLKFRMNL 60
G+D V +A D G TV +F K++ + + + G D Q + F + +N
Sbjct: 9 GKDFVLMAVDGNSGRGVITVRNDFNKIYPVQGNRLLTIIGEGNDRQVLADFVQRNIALNY 68
Query: 61 YE--LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPN 118
Y LK +S+ L E G Y ++ G+ D +P + +D G
Sbjct: 69 YRNGLKSTTQSIAHWIRRQVSDSLRE---GGYQCSMLLGGV---DEKPELFMIDQFG-TL 121
Query: 119 EPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIE 178
PE + G S +Y + + W ++ +E E + + + R +S + +
Sbjct: 122 VPETYASHGIGSNFVYALLDKNWHSGMEFEEALELMKKCIKEIQKRVIVSSSHYCIEVCY 181
Query: 179 KDK 181
KDK
Sbjct: 182 KDK 184
>UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-7;
n=3; Ascomycota|Rep: Probable proteasome subunit alpha
type-7 - Schizosaccharomyces pombe (Fission yeast)
Length = 259
Score = 39.9 bits (89), Expect = 0.038
Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
++G +C+ I +++ + Q VS NF K+ + + + GL D + + + +
Sbjct: 36 LRGNECIVIGVERKNVPKLQNVS-NFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQN 94
Query: 61 YELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCNMDLIGC 116
++L + + + ++ + Y + G P+ + +IAG D DN P V + G
Sbjct: 95 HKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGI 154
Query: 117 PNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALV 159
N + + G S+ E W+ L DE +L+
Sbjct: 155 YNAWKATAI-GRASKAAREYLEKNWKEGLSRDETIHLAVSSLL 196
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 39.5 bits (88), Expect = 0.050
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 4/177 (2%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D V + D R + K+ + P +Y G A DTQ V RL + L L
Sbjct: 49 KDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCGAGTAADTQWVTDRLSSELELMRL 108
Query: 64 KENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDF 123
NR R A L LY+ + G ++ G D P + ++ G +
Sbjct: 109 NTNRQSRIAGAIARLREHLYQYQ-GHVGAHLILGGFD--CQGPQLVSVAAHGSFSYLPYA 165
Query: 124 VVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+ C + E+ + +L E + ++ ++ + D SG V +I++D
Sbjct: 166 TMGSGCLAAI-ATLESRYRDDLTEQEAIDLVTASIESGIVHDLGSGSNVDVCVIKRD 221
>UniRef50_A3FQB4 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 203
Score = 38.3 bits (85), Expect = 0.12
Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 3/183 (1%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
+KG D VA+A+D +S K+ ++ +G+ G D + +K +NL
Sbjct: 7 IKGPDFVALASDTVAFSNVFRLSLKDDKIMEIDENKLIGVGGTLGDRMQFGEYIKCNLNL 66
Query: 61 YELKENRMMRPKTFSAMLSNLLYE-RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNE 119
Y L+ + + N L E R P+ + +I G + +L N
Sbjct: 67 YRLRNGVQLSTTATANFTRNELAELLRSDPHNVNILIGGYTKEEGAKLYWMDELASLGN- 125
Query: 120 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+ G + G+ + ++PN+ +E + + + R +S + V I++
Sbjct: 126 -VNNAAHGYGGLLVTGILDKYYKPNITQEEALDILVKCSEELKTRFLLSQYSLFVKIVDS 184
Query: 180 DKI 182
+
Sbjct: 185 QGV 187
>UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1;
Ajellomyces capsulatus NAm1|Rep: Proteasome component
PRE3 - Ajellomyces capsulatus NAm1
Length = 174
Score = 38.3 bits (85), Expect = 0.12
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 95 VIAGLDP-YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFET 153
+IAG D + Q Y ++ L G ++ + + + G+ S +YG C+A W + +E E
Sbjct: 72 IIAGYDARHGGQVY--SIPLGGSLHK-QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEF 128
Query: 154 ISQALVNAADRDAISGWGAVVYIIEKDKITEKHV 187
+ +L A D SG G + ++ +K +H+
Sbjct: 129 VKNSLQEAIKWDGSSG-GVIRMVVLTEKGAVRHL 161
>UniRef50_Q9U570 Cluster: Proteasome subunit beta type; n=6;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium falciparum
Length = 265
Score = 37.9 bits (84), Expect = 0.15
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
+ IA D++ + N ++F++ +G G D Q + + L R N+ L E
Sbjct: 21 IMIAADRKASYGSYAKFQNVERIFKINNKTVMGFSGELADAQYLHELLT-RKNINNLSEK 79
Query: 67 R----MMRPKTFSAMLSNLLYER--RFGPYFIEPVIAGLD--PYDN 104
+ M P+ + + +S + Y R R P F +IAG++ YDN
Sbjct: 80 KRKEDMYTPQHYHSYVSRVFYVRKNRIDPLFNNIIIAGINSQKYDN 125
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 37.9 bits (84), Expect = 0.15
Identities = 36/184 (19%), Positives = 77/184 (41%), Gaps = 4/184 (2%)
Query: 1 MKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNL 60
++G D V +A+D+ + + K+F+M + + G A DT + ++ + L
Sbjct: 7 IQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQL 66
Query: 61 YELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPN 118
Y+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 67 YKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYLAALA 125
Query: 119 EPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIE 178
+ F G + + + + P + + E + + L R ++ V II+
Sbjct: 126 K-APFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRIID 184
Query: 179 KDKI 182
K+ I
Sbjct: 185 KNGI 188
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 37.5 bits (83), Expect = 0.20
Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 6 CVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKE 65
CV +A+D R + S ++ ++ +G G+ +D + Q+L+ + +
Sbjct: 49 CV-MASDTRISMGYSIPSRLNLRILKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLN 107
Query: 66 NRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVV 125
N + + S+LLY RRF P++ ++ G++ D IG + V
Sbjct: 108 NTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNY-TYDAIGSFDCNHASTV 166
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQAL 158
G C + + + E + D ++TI Q +
Sbjct: 167 -GNCQSSAQCIMDYIEERKIPNDRNYKTILQVV 198
>UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Coenzyme Q-binding protein COQ10,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 207
Score = 37.5 bits (83), Expect = 0.20
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 57 RMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGC 116
R Y L++ P T A +S + + F PY ++ + +P DN+P + + +G
Sbjct: 42 REQRYVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGL-RVGF 100
Query: 117 PNEPEDFVVSGTCSE 131
E+F+ + TC +
Sbjct: 101 KQYDEEFICNVTCKD 115
>UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 37.1 bits (82), Expect = 0.27
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V + D R + + V+ K+ + ++ + G A ++T+ +K + +Y +
Sbjct: 26 VLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCTAGTAAHSETIGDYVKHALRMYTAQTG 85
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAG-LDPYDNQPYVCNMDLIGCPNEPEDFVV 125
+ + N++Y + + V+ G DP N + + G + +D V
Sbjct: 86 EEPTVLAAATSIKNIIYGNK--SFLSSSVVCGGYDPV-NGATLYRILQSGAMKQ-DDICV 141
Query: 126 SGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
G+ S ++G C+A ++ N+ +E + I A+ A RD SG
Sbjct: 142 GGSGSTYIWGYCDAHFKKNMTFEEAKQFIVTAVSLAIYRDGSSG 185
>UniRef50_Q09720 Cluster: Probable proteasome subunit beta type-2;
n=4; Ascomycota|Rep: Probable proteasome subunit beta
type-2 - Schizosaccharomyces pombe (Fission yeast)
Length = 194
Score = 37.1 bits (82), Expect = 0.27
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Query: 42 GLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGL 99
G A DT + + ++LY L+ N + P+ ++ L R PY + ++AG
Sbjct: 48 GEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGY 107
Query: 100 DPYDNQPYVCNMDLIG-CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQAL 158
+ +P + +D + C P + G S + + ++P+L DE +
Sbjct: 108 ETNLGKPELFWLDYLATCVRVP--YACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCF 165
Query: 159 VNAADRDAISGWGAVVYIIEKDKITEKHV 187
R I G + +++KD I E ++
Sbjct: 166 DELKKRMPIDFKGFICKVVDKDGIREINI 194
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 36.3 bits (80), Expect = 0.47
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 95 VIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETI 154
+IAG D P V + L G E F V G+ S +YG C+ + N+ +E +
Sbjct: 157 IIAGYDRKLG-PQVYGIPLGGAMME-NPFTVGGSGSAYIYGWCDDTFRENMSKEEAQAWV 214
Query: 155 SQALVNAADRDAISG 169
+A+ A RDA SG
Sbjct: 215 KRAISLAIARDASSG 229
>UniRef50_Q86T01 Cluster: Full-length cDNA clone CS0DK007YN03 of
HeLa cells of Homo sapiens; n=4; Eutheria|Rep:
Full-length cDNA clone CS0DK007YN03 of HeLa cells of
Homo sapiens - Homo sapiens (Human)
Length = 201
Score = 35.9 bits (79), Expect = 0.62
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V +A D R A S KV ++ P L + G A D + L + +YEL+
Sbjct: 69 VIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNK 128
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 100
+ S +L+N++Y+ + + +I G D
Sbjct: 129 ERISVAAASKLLANMVYQYKGMGLSMGTMICGWD 162
>UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial
precursor; n=2; Caenorhabditis|Rep: ATP synthase delta
chain, mitochondrial precursor - Caenorhabditis elegans
Length = 163
Score = 35.9 bits (79), Expect = 0.62
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 123 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVV 174
FV SGT S + G C+ L E LK +E+ E+ ++A ++AA R SG G+ V
Sbjct: 91 FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQR--ASGEGSEV 140
>UniRef50_A2QVK6 Cluster: Catalytic activity: PRE2 has a
chymotrypsin-like proteolytic activity; n=7;
Trichocomaceae|Rep: Catalytic activity: PRE2 has a
chymotrypsin-like proteolytic activity - Aspergillus
niger
Length = 379
Score = 35.5 bits (78), Expect = 0.82
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 62 ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPE 121
+++ R + S +L+NL Y + + ++AG+ P + P + +D G P
Sbjct: 232 QIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMTPQEG-PALYYIDSDGT-RLPG 289
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
+ G+ YG+ +A + +L +E E ++++ A RDA SG +Y ++++
Sbjct: 290 NLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAMHRDAYSGGFINLYHVKEE 348
>UniRef50_A5LHX3 Cluster: Proteasome subunit beta type-11 precursor;
n=17; Euteleostomi|Rep: Proteasome subunit beta type-11
precursor - Homo sapiens (Human)
Length = 300
Score = 35.5 bits (78), Expect = 0.82
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 3/163 (1%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V A D R + KV + L G + D T ++ L+ + L EL+E
Sbjct: 61 VIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREG 120
Query: 67 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 126
++ + + +LS ++ + R + + G D + + D G + + F V
Sbjct: 121 QLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSD--GTRLQGDIFSV- 177
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISG 169
G+ S YG+ + + ++ E + A+ +A RDA SG
Sbjct: 178 GSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220
>UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 3728
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 5 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 53
+ +++ T + +G ++ VST+ P + GP L V L LATDT + R
Sbjct: 2015 ELLSVTTQQYYGALSRLVSTSLPAIDSGGPLLPVHLSSLATDTLSYILR 2063
>UniRef50_Q4UIA0 Cluster: Proteasome subunit beta type; n=8;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 271
Score = 34.3 bits (75), Expect = 1.9
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 6/187 (3%)
Query: 3 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
G+D V +A D R N K+ ++ +Y G+A D + L + L+
Sbjct: 48 GRDSVVLAADTRATQGIIVADKNCSKLHKISDNIYCAGAGVAADLEHTTLWLANNIELHR 107
Query: 63 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPED 122
L + R + +ML + L++ + G ++ G D Y P++ ++ G ++
Sbjct: 108 LNTKKAPRVQMCISMLVHELFKYQ-GYKQCALILGGFD-YTG-PHLFSVSPHG-SSDSLP 163
Query: 123 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDKI 182
F G+ S + E + + +E E +A+ D G G V ++ DK
Sbjct: 164 FCTMGSGSLNAMTVLEQNYFDGMSVEEATELAVKAISAGITNDL--GSGGNVDVVVMDKN 221
Query: 183 TEKHVKT 189
KH +T
Sbjct: 222 GSKHSRT 228
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 34.3 bits (75), Expect = 1.9
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 4 QDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYEL 63
+D + + D R + ++F++G +G+ G +D Q + + L +
Sbjct: 25 RDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTL----TILTQ 80
Query: 64 KENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPY---DNQPYVCNMDLIGCPN 118
++NR + PK + M+ +LY R P + + GL+ D + + ++GC N
Sbjct: 81 EDNRRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRRTHT-REKMLGCVN 139
Query: 119 EPEDFVVS 126
+F S
Sbjct: 140 HLGNFYFS 147
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 33.9 bits (74), Expect = 2.5
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 66
V IA D R S + KV ++ P L + G A D + L + +YEL+
Sbjct: 82 VVIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAADCAFWERVLAEQCRIYELRNK 141
Query: 67 RMMRPKTFSAMLSNLLY 83
+ S +L+N+LY
Sbjct: 142 ERISVAAASKLLANMLY 158
>UniRef50_P91477 Cluster: Proteasome subunit beta type-2; n=3;
Caenorhabditis|Rep: Proteasome subunit beta type-2 -
Caenorhabditis elegans
Length = 199
Score = 33.9 bits (74), Expect = 2.5
Identities = 33/179 (18%), Positives = 73/179 (40%), Gaps = 3/179 (1%)
Query: 4 QDCVAIATDKR-FGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 62
++ V +A DK F A + K +++G L + G D K + LY
Sbjct: 10 ENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKRNLQLYS 69
Query: 63 LKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEP 120
++ + P + + E R Y ++ +I G D +++ ++ ++D +
Sbjct: 70 VRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYLANGLGQ 129
Query: 121 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEK 179
+ ++ G C Y + + ++ ++ E +++ + A R + G V II+K
Sbjct: 130 QPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDK 188
>UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 33.5 bits (73), Expect = 3.3
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 54 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ 105
+K R+ L L +R+M P S+ +++ FGP P++AG P D Q
Sbjct: 1 MKTRLALLPLARSRLMSPSPASSQAAHVCAHGTFGPGLDPPLLAGGFPKDKQ 52
>UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome
subunit beta type 4 precursor (Proteasome beta chain)
(Macropain beta chain) (Multicatalytic endopeptidase
complex beta chain) (Proteasome chain 3); n=1; Apis
mellifera|Rep: PREDICTED: similar to Proteasome subunit
beta type 4 precursor (Proteasome beta chain) (Macropain
beta chain) (Multicatalytic endopeptidase complex beta
chain) (Proteasome chain 3) - Apis mellifera
Length = 256
Score = 33.5 bits (73), Expect = 3.3
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 7 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE-LKE 65
+ IATD + N +V ++ + +G G D Q + ++ ++ E L +
Sbjct: 61 ILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYADYQCLKSHIERKILEEECLDD 120
Query: 66 NRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLD 100
++PK L+ +LY RR F P++ +I GL+
Sbjct: 121 GLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLE 157
>UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6; n=1; Apis
mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6 - Apis
mellifera
Length = 209
Score = 33.1 bits (72), Expect = 4.4
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 116 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVY 175
C +P + G+ S +YG ++ ++PN+ +E + + L A RD SG +
Sbjct: 129 CVRQP--ISIGGSGSTYVYGYMDSQYKPNMSKNECVKLVENTLALAMSRDGSSGGVIRIG 186
Query: 176 IIEKDKITEK 185
+I I K
Sbjct: 187 VITNKGIERK 196
>UniRef50_Q8BTY5 Cluster: 2 days neonate thymus thymic cells cDNA,
RIKEN full-length enriched library, clone:E430014A22
product:proteasome (prosome, macropain) subunit, beta
type 5, full insert sequence; n=1; Mus musculus|Rep: 2
days neonate thymus thymic cells cDNA, RIKEN full-length
enriched library, clone:E430014A22 product:proteasome
(prosome, macropain) subunit, beta type 5, full insert
sequence - Mus musculus (Mouse)
Length = 177
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 127 GTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKD 180
G+ S YG+ + + +LK +E ++ +A+ A RDA SG +Y + +D
Sbjct: 101 GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVRED 154
>UniRef50_Q8YK43 Cluster: All8075 protein; n=1; Nostoc sp. PCC
7120|Rep: All8075 protein - Anabaena sp. (strain PCC
7120)
Length = 681
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 122 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAISGWGAVVYIIEKDK 181
D VSGT E +Y M N +P ++++ I + + W A+V +IE +
Sbjct: 451 DLSVSGTRLEMVYDMLYEQRLKNAQPAKIYKAIFMTFIERMSEFTLGDWRAIVKMIEPTE 510
Query: 182 I 182
+
Sbjct: 511 L 511
>UniRef50_Q86LH1 Cluster: Pickpocket 10; n=1; Drosophila
melanogaster|Rep: Pickpocket 10 - Drosophila
melanogaster (Fruit fly)
Length = 485
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 40 LPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPV 95
L LA T FQ + + ++ E+ ++P+ ++ ++ NL Y+R + P F E +
Sbjct: 126 LENLANSTYINFQNIPQNEQIDQIIEDIGLKPEHYTELIYNLTYDRTYEPNFNERI 181
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.138 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,647,742
Number of Sequences: 1657284
Number of extensions: 8417885
Number of successful extensions: 15687
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 15526
Number of HSP's gapped (non-prelim): 131
length of query: 192
length of database: 575,637,011
effective HSP length: 96
effective length of query: 96
effective length of database: 416,537,747
effective search space: 39987623712
effective search space used: 39987623712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 70 (32.3 bits)
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