Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001394-TA|BGIBMGA001394-PA|undefined
         (64 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    19   3.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    19   4.0  

>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 101

 Score = 19.4 bits (38), Expect = 3.1
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 37 TFAIVGATGHTNVWETARKSRFGRFD 62
          TF ++      N W       FG+F+
Sbjct: 1  TFMMIALPNKDNSWTVTLFMPFGKFE 26


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 19.0 bits (37), Expect = 4.0
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)

Query: 6  MNSITLVLFQSMM--KVRYTVDVTNY 29
          +NSI ++LFQS +   V +T D + +
Sbjct: 12 VNSIRILLFQSRIFGLVTFTPDRSKF 37


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.128    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,014
Number of Sequences: 317
Number of extensions: 311
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 64
length of database: 114,650
effective HSP length: 43
effective length of query: 21
effective length of database: 101,019
effective search space:  2121399
effective search space used:  2121399
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)