GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001394-TA|BGIBMGA001394-PA|undefined
         (64 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106679-1|AAD21971.1|  326|Drosophila melanogaster WD-40 repeat...    26   5.7  
AF088846-1|AAD44035.1|  327|Drosophila melanogaster mitotic chec...    26   5.7  
AF075594-1|AAD13398.1|  327|Drosophila melanogaster mitotic chec...    26   5.7  
AE014297-4409|AAF56914.1|  326|Drosophila melanogaster CG7581-PA...    26   5.7  

>AF106679-1|AAD21971.1|  326|Drosophila melanogaster WD-40 repeat
           protein protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 22  YTVDVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRF 61
           Y V+  ++ N     TFA  G+ G  N+W+   K R  +F
Sbjct: 235 YPVNALSFHN--VYQTFATGGSDGIVNIWDGFNKKRLCQF 272


>AF088846-1|AAD44035.1|  327|Drosophila melanogaster mitotic
           checkpoint control protein protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 22  YTVDVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRF 61
           Y V+  ++ N     TFA  G+ G  N+W+   K R  +F
Sbjct: 236 YPVNALSFHN--VYQTFATGGSDGIVNIWDGFNKKRLCQF 273


>AF075594-1|AAD13398.1|  327|Drosophila melanogaster mitotic
           checkpoint control proteinBub3 protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 22  YTVDVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRF 61
           Y V+  ++ N     TFA  G+ G  N+W+   K R  +F
Sbjct: 236 YPVNALSFHN--VYQTFATGGSDGIVNIWDGFNKKRLCQF 273


>AE014297-4409|AAF56914.1|  326|Drosophila melanogaster CG7581-PA
           protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 22  YTVDVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRF 61
           Y V+  ++ N     TFA  G+ G  N+W+   K R  +F
Sbjct: 235 YPVNALSFHN--VYQTFATGGSDGIVNIWDGFNKKRLCQF 272


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.128    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,559,194
Number of Sequences: 52641
Number of extensions: 65252
Number of successful extensions: 152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 152
Number of HSP's gapped (non-prelim): 4
length of query: 64
length of database: 24,830,863
effective HSP length: 44
effective length of query: 20
effective length of database: 22,514,659
effective search space: 450293180
effective search space used: 450293180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)