GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001394-TA|BGIBMGA001394-PA|undefined
         (64 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   0.38 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   2.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   3.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   4.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   4.6  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    19   6.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   6.1  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.6 bits (46), Expect = 0.38
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 2   PASSMNSITLVLFQSMMKVRYTVD-VTNYENGETSVTFAIVGATGHTNVWETARKSRFG 59
           P + +N +TL  +   M+V Y+   +++YE+GET   F I G      +++   K  FG
Sbjct: 314 PGTGIN-VTLKGYCIDMEVPYSGTLISHYEDGETKSRF-ISGIRSEQTIFDV--KPEFG 368


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 22   YTVDVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRFDV 63
            Y VDV  +  GE+     +  A   +NV    R   F R ++
Sbjct: 1191 YVVDVRVHVPGESESETVLTLAWSESNVESKGRLLGFWRVEM 1232


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/38 (26%), Positives = 14/38 (36%)

Query: 24  VDVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRF 61
           +D+ +  NG      AI G       WE+      G F
Sbjct: 283 IDILSQINGILGSLVAITGGCFLFRAWESIIVGMIGAF 320


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 25  DVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRFD 62
           DV+   N   ++     G    T VW+ A  S+ G ++
Sbjct: 718 DVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYE 755


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 25  DVTNYENGETSVTFAIVGATGHTNVWETARKSRFGRFD 62
           DV+   N   ++     G    T VW+ A  S+ G ++
Sbjct: 714 DVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYE 751


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)

Query: 32  GETSVTFAIVGATGHTNVW 50
           G+  + +AI G+    N+W
Sbjct: 662 GKAYLMYAIAGSQCFINIW 680


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 28  NYENGETSVTFAIVGATGHTNV 49
           N E G  +     VG+ G+ N+
Sbjct: 452 NLEKGRCTGKIVTVGSDGNANI 473


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
          carboxykinase protein.
          Length = 118

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 26 VTNYENGETSVTFAIVGATGHTNV 49
          +TN +  +  +T A   A G TN+
Sbjct: 4  ITNPKGKKRYITAAFPSACGKTNL 27


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)

Query: 1   MPASSMNSITLVLFQSM---MKVRYTVDVTNYENGE 33
           +P   +    +VLF +     +VRY  +V  Y NG+
Sbjct: 103 LPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGD 138


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.128    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,248
Number of Sequences: 429
Number of extensions: 396
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 64
length of database: 140,377
effective HSP length: 44
effective length of query: 20
effective length of database: 121,501
effective search space:  2430020
effective search space used:  2430020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)