Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001393-TA|BGIBMGA001393-PA|undefined
         (721 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   6.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   8.7  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 7/23 (30%), Positives = 16/23 (69%)

Query: 663 VTAAGEAKLTCKPPASPEDRFQR 685
           + + G+ ++T K P +PE+++ R
Sbjct: 259 IISRGQVRVTIKQPDTPEEKYIR 281


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 503 QSYSTNQGLEPSKTVTLLNGGTVPGVEYDTK 533
           Q ++  +GL+ S  + L+NG T+P + + TK
Sbjct: 269 QGHAILKGLKTS--IILMNGTTLPQIMWGTK 297


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,397
Number of Sequences: 429
Number of extensions: 9205
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 721
length of database: 140,377
effective HSP length: 63
effective length of query: 658
effective length of database: 113,350
effective search space: 74584300
effective search space used: 74584300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)