Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001393-TA|BGIBMGA001393-PA|undefined
(721 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 35 1.2
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 35 1.2
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 35 1.2
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 35 1.2
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 35 1.2
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 35 1.2
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 35 1.2
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 35 1.2
AF217226-1|AAG09701.1| 521|Homo sapiens zinc finger protein ZNF... 34 1.5
AB058777-1|BAB47503.2| 579|Homo sapiens KIAA1874 protein protein. 32 6.2
U31520-1|AAC50302.1| 1144|Homo sapiens alpha mannosidase II prot... 32 8.2
D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII... 32 8.2
AC079145-3|AAX88936.1| 1170|Homo sapiens unknown protein. 32 8.2
AB037757-1|BAA92574.2| 1219|Homo sapiens KIAA1336 protein protein. 32 8.2
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 34.7 bits (76), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 527 GVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCS 574
G T KAC CS V S+D N N G+C C P F + T +CS
Sbjct: 1050 GHSITTGCKACNCST-VGSLDFQCNVNTGQCNCHPKFSGAKCT--ECS 1094
>AF217226-1|AAG09701.1| 521|Homo sapiens zinc finger protein ZNF286
protein.
Length = 521
Score = 34.3 bits (75), Expect = 1.5
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 481 RDIILPEIYRKFYSKSTPFEVEQSYSTNQGLEPSKTVTLLNGGTVPGVEYDTKHKACCCS 540
RD++L E YR S P +SY+ G EP K + +E + K
Sbjct: 67 RDVML-ENYRNLVSLWLPVSKPESYNLENGKEPLKLERKAPKSSYSDMETRPQSKDSTSV 125
Query: 541 EQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCSN 575
+ S ++ K + T +DS+ + ++C N
Sbjct: 126 QDFSKAESCKVAIIDRLTRNSVYDSNLEAALECEN 160
>AB058777-1|BAB47503.2| 579|Homo sapiens KIAA1874 protein protein.
Length = 579
Score = 32.3 bits (70), Expect = 6.2
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 481 RDIILPEIYRKFYSKSTPFEVEQSYSTNQGLEPSKTVTLLNGGTVPGVEYDTKHKACCCS 540
RD++L E YR S P +S++ G EP K + +E + K
Sbjct: 125 RDVML-ENYRNLVSLWLPVSKPESHNLENGKEPLKLERKAPKSSYSDMETRPQSKDSTSV 183
Query: 541 EQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCSN 575
+ S ++ K + T +DS+ + ++C N
Sbjct: 184 QDFSKAESCKVAIIDRLTRNSVYDSNLEAALECEN 218
>U31520-1|AAC50302.1| 1144|Homo sapiens alpha mannosidase II
protein.
Length = 1144
Score = 31.9 bits (69), Expect = 8.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 295 SNNDDGYEETFKDYFKINTCAYFHNL-CNIDFSSKKTIVICLIIFLEIVWCI 345
S+ND G+ +TF DYF+ T F+N+ + S++ + I +L W I
Sbjct: 174 SHNDPGWLKTFNDYFRDKTQYIFNNMVLKLKEDSRRKFIWSEISYLSKWWDI 225
>D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII
protein.
Length = 1143
Score = 31.9 bits (69), Expect = 8.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 295 SNNDDGYEETFKDYFKINTCAYFHNL-CNIDFSSKKTIVICLIIFLEIVWCI 345
S+ND G+ +TF DYF+ T F+N+ + S++ + I +L W I
Sbjct: 174 SHNDPGWLKTFNDYFRDKTQYIFNNMVLKLKEDSRRKFIWSEISYLSKWWDI 225
>AC079145-3|AAX88936.1| 1170|Homo sapiens unknown protein.
Length = 1170
Score = 31.9 bits (69), Expect = 8.2
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 397 TASRVQINTSDYEGLFIAEDVHNVGTMCSSVSRNSVGTCTQSFFSSK 443
TA + ++ DYE + +++++ +C+ SR + GTC+++F K
Sbjct: 1036 TALKTALHLKDYEDIIPPVEIYSLLALCACASR-AFGTCSKAFIKLK 1081
>AB037757-1|BAA92574.2| 1219|Homo sapiens KIAA1336 protein protein.
Length = 1219
Score = 31.9 bits (69), Expect = 8.2
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 397 TASRVQINTSDYEGLFIAEDVHNVGTMCSSVSRNSVGTCTQSFFSSK 443
TA + ++ DYE + +++++ +C+ SR + GTC+++F K
Sbjct: 1085 TALKTALHLKDYEDIIPPVEIYSLLALCACASR-AFGTCSKAFIKLK 1130
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,572,703
Number of Sequences: 224733
Number of extensions: 4170128
Number of successful extensions: 8538
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8537
Number of HSP's gapped (non-prelim): 14
length of query: 721
length of database: 73,234,838
effective HSP length: 95
effective length of query: 626
effective length of database: 51,885,203
effective search space: 32480137078
effective search space used: 32480137078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 69 (31.9 bits)
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