Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001391-TA|BGIBMGA001391-PA|IPR000536|Nuclear hormone
receptor, ligand-binding, IPR008946|Nuclear receptor, ligand-binding,
IPR013629|Zinc finger, C4-type, C-terminal
(314 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 93 2e-21
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 83 3e-18
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 81 8e-18
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 36 3e-04
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 23 2.2
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 23 2.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 2.9
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 22 6.7
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 93.1 bits (221), Expect = 2e-21
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 36 DPGAGLNNHPYLSSYISLLLRAEPYPASRYSPCVQPTNVMGIDNICELAARLLFSAVEWA 95
DPG L +L + L + P P P + P ++ ICE AA+L+F V+W
Sbjct: 159 DPGPALPPTGFLCNNYPPLPQVPPLPL----PPIFPPTMINPSAICESAAQLIFMNVQWV 214
Query: 96 RNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLAAAG-LHASPMAADRVV 154
R+IP F L ++DQ+ LL W +LFVL A+Q + + L+ A G L P D
Sbjct: 215 RSIPAFTCLPLSDQLLLLEESWLDLFVLGAAQFLPLMDFSVLVEACGVLQQEPHRRD--- 271
Query: 155 AFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTT 191
AF+ + FQE ++K+ +D+ E++CL+AIVLF T
Sbjct: 272 AFLKEVADFQETLKKISQFQLDAHEFACLRAIVLFKT 308
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 83.0 bits (196), Expect = 3e-18
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 36 DPGAGLNNHPYLSSYISLLLRAEPYPASRYSPCVQPTNVMGIDNICELAARLLFSAVEWA 95
DPG L +L + L + P P P PT ++ ICE AA+LLF V+W
Sbjct: 159 DPGPALPPAGFLCNNYLPLPQVPPLPLP---PIFAPT-MINPSAICESAAQLLFMNVQWV 214
Query: 96 RNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLAAAG-LHASPMAADRVV 154
R+IP F L ++DQ+ LL W +LFVL A+Q + + L+ A G L P D
Sbjct: 215 RSIPAFTCLPLSDQLLLLEESWLDLFVLGAAQFLPLMDFSVLVEACGVLQQEPHRRD--- 271
Query: 155 AFMDHIRIFQEQVEKLKALHVDSAEYSCLKA 185
AF+ + FQE ++K+ +D+ E++CL+A
Sbjct: 272 AFLKEVADFQETLKKISQFQLDAHEFACLRA 302
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 81.4 bits (192), Expect = 8e-18
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 77 IDNICELAARLLFSAVEWARNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAP 136
++NIC+ + LF V+WA+ +P F L +TDQV LLR W+EL + S SM A
Sbjct: 211 VNNICQATHKQLFQLVQWAKLVPHFTSLPLTDQVQLLRAGWNELLIAAFSHRSMQAQDA- 269
Query: 137 LLAAAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLF 189
++ A GL + A V + R+ E V K+K + +D E CL+AI+L+
Sbjct: 270 IVLATGLTVNKSTAHAVGVGNIYDRVLSELVNKMKEMKMDKTELGCLRAIILY 322
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 36.3 bits (80), Expect = 3e-04
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 79 NICELAARLLFSAVEWARNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLL 138
+I E+ + VE+A+ +P F +L DQ+ALL+ SE+ + ++ + +L
Sbjct: 357 HITEITILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMFRMAR-RYDVQTDSIL 415
Query: 139 AAAGLHASPMAAD--RVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFT 190
++ P + D + + I + ++ VD+AEY+ L AIV+F+
Sbjct: 416 F---VNNQPYSRDSYNLAGMGETIEDLLHFCRTMYSMKVDNAEYALLTAIVIFS 466
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 23.4 bits (48), Expect = 2.2
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 32 LGNGDPGAGLNNHPYLSSYISLLLRAEPYPASRYSPCVQPTNVMGIDNICEL 83
LG G G G L+ + L A Y S P + V+G + +CEL
Sbjct: 260 LGLGSYGRGFA----LADPTNTSLYAATYGGSEAGPYTRAMGVIGYNEVCEL 307
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 23.4 bits (48), Expect = 2.2
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 32 LGNGDPGAGLNNHPYLSSYISLLLRAEPYPASRYSPCVQPTNVMGIDNICEL 83
LG G G G L+ + L A Y S P + V+G + +CEL
Sbjct: 260 LGLGSYGRGFA----LADPTNTSLYAATYGGSEAGPYTRAMGVIGYNEVCEL 307
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 198 LFGEARLLLYRVAGAGVAVTNYTELITL 225
+F E +LLL+++ +AV+ + T+
Sbjct: 708 VFSETKLLLFKITSVMIAVSGLVYIATV 735
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 55 LRAEPYPASRYSPCVQPTNVMGIDNICEL 83
L A Y S P + V+G + +CEL
Sbjct: 278 LYAGTYGGSDAGPYTREMGVIGYNEVCEL 306
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,375
Number of Sequences: 317
Number of extensions: 2485
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 314
length of database: 114,650
effective HSP length: 57
effective length of query: 257
effective length of database: 96,581
effective search space: 24821317
effective search space used: 24821317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)
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