BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001391-TA|BGIBMGA001391-PA|IPR000536|Nuclear hormone receptor, ligand-binding, IPR008946|Nuclear receptor, ligand-binding, IPR013629|Zinc finger, C4-type, C-terminal (314 letters) Database: mosquito 2123 sequences; 516,269 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 26 1.2 AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 3.6 AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 23 8.4 >AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase protein. Length = 309 Score = 26.2 bits (55), Expect = 1.2 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 142 GLHASPMAADRVV--AFMDHIRIFQEQVEKLKALH 174 G +P A+ V+ F + I + EQVE+ KA+H Sbjct: 214 GSLTTPACAESVIWTVFTESISVSLEQVERFKAIH 248 >AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. Length = 3361 Score = 24.6 bits (51), Expect = 3.6 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 167 VEKLKALHVDSAEYSCLKAIVLFTTGKILDSLFGEARLL 205 +E+LKALH D+ L+ I L LD+LF LL Sbjct: 3295 MERLKALHTDA-----LEEIELHGANLALDNLFQRENLL 3328 >AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase protein. Length = 684 Score = 23.4 bits (48), Expect = 8.4 Identities = 9/13 (69%), Positives = 11/13 (84%) Query: 281 LPSNYTSSPRVPE 293 +PSNYT+S RV E Sbjct: 181 IPSNYTASDRVDE 193 Database: mosquito Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 516,269 Number of sequences in database: 2123 Lambda K H 0.320 0.134 0.398 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 277,880 Number of Sequences: 2123 Number of extensions: 9853 Number of successful extensions: 24 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 22 Number of HSP's gapped (non-prelim): 3 length of query: 314 length of database: 516,269 effective HSP length: 64 effective length of query: 250 effective length of database: 380,397 effective search space: 95099250 effective search space used: 95099250 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 48 (23.4 bits)
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