BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001390-TA|BGIBMGA001390-PA|IPR001357|BRCT
(1178 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 31 0.23
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.54
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 29 0.54
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 29 0.54
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 28 1.7
DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein. 27 2.9
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 2.9
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 26 5.1
AY070234-1|AAL58538.1| 223|Anopheles gambiae glutathione S-tran... 26 6.7
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 26 6.7
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 26 6.7
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 30.7 bits (66), Expect = 0.23
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 245 DNNMSIPRTNLNLSKTSDLESTDSVCSMNLESPDHIPSAAS-KLISKLSNGNSSTPTDAT 303
D N+S+ RTN + S S CS E+P A + SK S +SS
Sbjct: 264 DENISVTRTNSTIRSRSSSLSRSRSCSRQAETPRADDRALNLDTKSKPSTSSSSGTGCDR 323
Query: 304 EDSDC 308
+D DC
Sbjct: 324 DDGDC 328
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 29.5 bits (63), Expect = 0.54
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 573 MVPSNGDGGHSPKSPKDEKPLSSMVATPKSVSKLKQKRRPNSPRPAT 619
+V S+ GGH SP L+S P +++ K SP PAT
Sbjct: 703 VVSSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPAT 749
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 29.5 bits (63), Expect = 0.54
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 234 EKASSEGN--AYSDNNMSIPRTNLNLSKTSDLESTDSVCSMNLESPDHIPSAASKLISKL 291
E SS GN A S++ + + + + T S S S+N +P + S ++S+
Sbjct: 484 EPHSSSGNWSASSESGRTSIGSEITTTNTHPKSSASST-SLNHSNPISSSAPPSSIVSRR 542
Query: 292 SNGNSSTPTDATEDSDCTPDM 312
N+S + T + TPD+
Sbjct: 543 RFFNTSASSSVTSEGTITPDL 563
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 29.5 bits (63), Expect = 0.54
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 234 EKASSEGN--AYSDNNMSIPRTNLNLSKTSDLESTDSVCSMNLESPDHIPSAASKLISKL 291
E SS GN A S++ + + + + T S S S+N +P + S ++S+
Sbjct: 485 EPHSSSGNWSASSESGRTSIGSEITTTNTHPKSSASST-SLNHSNPISSSAPPSSIVSRR 543
Query: 292 SNGNSSTPTDATEDSDCTPDM 312
N+S + T + TPD+
Sbjct: 544 RFFNTSASSSVTSEGTITPDL 564
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 590 EKPLSSMVATPKSVSKLKQKRRPNSPRPATPVDKMMKQEYPGHAP 634
+KP+ S T S + L K+RP +P P + PG P
Sbjct: 28 QKPIGSGQLTSSSAASLLGKQRPLAPAPTVLGGHRANAKLPGAGP 72
>DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein.
Length = 434
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 657 DLNKYLIKFDDGQTKVLLDDFIIFGDMKTLPLTGQL 692
+L++ L+ FDD + +V L F D +P+ Q+
Sbjct: 310 ELDRSLVDFDDDEVEVHLPKFEFNSDYNLIPILNQM 345
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 583 SPKSP-KDEKPLSSMVATPKSVS-----KLKQKRRPNSPRPATPVDKMMKQEYP 630
SP SP K + + P+++S + K+R N+ P TP D+ + +E P
Sbjct: 592 SPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPETPSDQPLIKEVP 645
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 24 ELVSSTAPDEDKKEKSEDCLEEPAMTKRKNSDELVQSSPKIQKLELVEDE 73
+L D KE++E LE +T + EL Q P+ + + E+E
Sbjct: 311 DLSDEVQGDNKSKERAEQELERLKITIAEKEKELEQVRPRYEAMRRKEEE 360
>AY070234-1|AAL58538.1| 223|Anopheles gambiae glutathione
S-transferase E3 protein.
Length = 223
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1140 NQDGIPLVSTHWVIECLIQAEIVDPTCH 1167
N +G+PL +H +I L+Q D T +
Sbjct: 59 NDNGVPLYDSHAIINYLVQKYAKDDTLY 86
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 25.8 bits (54), Expect = 6.7
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 530 TPKSSLKKTRVRGRRPMAAKTKRAILPTQPEEAEFMYDMNSPEMVPSNGDGGHSPKSPKD 589
+P S + R G R R P ++ D+++P + GD +
Sbjct: 116 SPYSYNDRNRYGGDRGYDRNQNRERYPGDRSPNPYVSDVDNPLLYRDGGDRNRNRYVSDV 175
Query: 590 EKPLSSMVATPKSVSKLKQKRRPNSP--RPATPVD 622
E PL TP + S+ R +P RP P D
Sbjct: 176 ENPLLYRDRTPYNPSRDYDDRNRYNPNARPYNPND 210
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/84 (19%), Positives = 37/84 (44%)
Query: 474 KKLQEIFSHIREVSDDGGRSISDDKVSIAVQTSLSTEGSISNGNASPEEVSKCDKTTPKS 533
+KLQ + + + ++ ++I + + +A S + + +NG+A + +T S
Sbjct: 754 EKLQSLTQELNQSDEELEQAIKNQRNLLAAGRSPARCPADTNGDAGTPDNPLSSSSTSSS 813
Query: 534 SLKKTRVRGRRPMAAKTKRAILPT 557
+ G +AA ++PT
Sbjct: 814 LYPNGSIGGVNSLAAAAAATLIPT 837
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.311 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,144,492
Number of Sequences: 2123
Number of extensions: 46507
Number of successful extensions: 121
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 109
Number of HSP's gapped (non-prelim): 14
length of query: 1178
length of database: 516,269
effective HSP length: 72
effective length of query: 1106
effective length of database: 363,413
effective search space: 401934778
effective search space used: 401934778
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -