Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001388-TA|BGIBMGA001388-PA|undefined
         (113 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034415-1|AAH34415.1|  458|Homo sapiens bactericidal/permeabili...    29   3.3  
AY358723-1|AAQ89085.1|  458|Homo sapiens DJ726C3.2 protein.            29   3.3  
AL121756-5|CAC18884.1|  458|Homo sapiens bactericidal/permeabili...    29   3.3  
AK172819-1|BAD18788.1|  458|Homo sapiens protein ( Homo sapiens ...    29   3.3  
AF465765-1|AAM73983.1|  458|Homo sapiens bactericidal/permeabili...    29   3.3  
BC028580-1|AAH28580.1|  512|Homo sapiens MGC26597 protein protein.     28   5.7  
BC022562-1|AAH22562.1|  241|Homo sapiens Unknown (protein for IM...    27   9.9  

>BC034415-1|AAH34415.1|  458|Homo sapiens
           bactericidal/permeability-increasing protein-like 1
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 23  VGTNINRPMVYHHNAKYDAKLFRKRVENLHYVLPQV 58
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AY358723-1|AAQ89085.1|  458|Homo sapiens DJ726C3.2 protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 23  VGTNINRPMVYHHNAKYDAKLFRKRVENLHYVLPQV 58
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AL121756-5|CAC18884.1|  458|Homo sapiens
           bactericidal/permeability-increasing protein-like1
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 23  VGTNINRPMVYHHNAKYDAKLFRKRVENLHYVLPQV 58
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AK172819-1|BAD18788.1|  458|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23980 fis, clone HEP20953. ).
          Length = 458

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 23  VGTNINRPMVYHHNAKYDAKLFRKRVENLHYVLPQV 58
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>AF465765-1|AAM73983.1|  458|Homo sapiens
           bactericidal/permeability-increasing protein-like 1
           protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 23  VGTNINRPMVYHHNAKYDAKLFRKRVENLHYVLPQV 58
           +GT   +P++ H NA     +    V NLHYV P++
Sbjct: 406 MGTVFEKPLLDHLNALLAMGIALPGVVNLHYVAPEI 441


>BC028580-1|AAH28580.1|  512|Homo sapiens MGC26597 protein protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 63  GKSIQGILAYDKTHSTASANITQGGIWFTFVNLRMKSERVNKLNYDVYI 111
           G    G   Y KT STA     Q GI +T  +L  K ER + L  D Y+
Sbjct: 55  GVDSSGETTYKKTTSTALKGAIQLGITYTVGSLSTKPER-DVLMQDFYV 102


>BC022562-1|AAH22562.1|  241|Homo sapiens Unknown (protein for
           IMAGE:4794059) protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 46  KRVENLHYVLPQVPSTIGKSIQGILAYDKTHSTAS 80
           KR   LH+ LPQ       S QG   + KT S+ S
Sbjct: 116 KRPHPLHHKLPQQEPVFSSSSQGPRCWSKTRSSPS 150


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,507,876
Number of Sequences: 224733
Number of extensions: 450784
Number of successful extensions: 672
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 666
Number of HSP's gapped (non-prelim): 7
length of query: 113
length of database: 73,234,838
effective HSP length: 80
effective length of query: 33
effective length of database: 55,256,198
effective search space: 1823454534
effective search space used: 1823454534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)