GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001388-TA|BGIBMGA001388-PA|undefined
         (113 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   0.28 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   0.66 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   2.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   2.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   3.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   4.6  

>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 54   VLPQVPSTIGKSIQGILAYDKTHSTASANITQGGI 88
            ++  V  TIG S  G  A DKTHS +   +   G+
Sbjct: 976  MMESVDLTIGGSDDGSFAGDKTHSASPNRLESPGL 1010


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 54   VLPQVPSTIGKSIQGILAYDKTHSTASAN 82
            ++  V  TIG S  G  A DKTHS AS N
Sbjct: 978  MMESVDLTIGGSDDGSFAGDKTHS-ASPN 1005


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 32   VYHHNAKYDAKLFRKRVENLHYVLPQVPSTIGKSIQGILAYDKTHSTASANITQGGI 88
            + + N  Y+ K+  +  E    +  Q+P  I  S  GIL  D    TAS  +   GI
Sbjct: 1030 IRYRNESYE-KINSELQELYRNITSQIPFAIDPSKFGILVNDAYIVTASHKVLFDGI 1085



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 31   MVYHHNAKYDAKLFRKRVENLHYV 54
            ++ HH     A L R RVEN+  +
Sbjct: 1964 ILLHHGENSVAPLHRHRVENIQKI 1987


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 32   VYHHNAKYDAKLFRKRVENLHYVLPQVPSTIGKSIQGILAYDKTHSTASANITQGGI 88
            + + N  Y+ K+  +  E    +  Q+P  I  S  GIL  D    TAS  +   GI
Sbjct: 1031 IRYRNESYE-KINSELQELYRNITSQIPFAIDPSKFGILVNDAYIVTASHKVLFDGI 1086



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 31   MVYHHNAKYDAKLFRKRVENLHYV 54
            ++ HH     A L R RVEN+  +
Sbjct: 1965 ILLHHGENSVAPLHRHRVENIQKI 1988


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 42  KLFRKRVENLHYVLPQVPSTIGKS 65
           +L   R  N  Y+L QVP+ +G +
Sbjct: 545 RLTLSRKANAQYMLQQVPAIVGSA 568


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 40  DAKLFRKRVENLHYVLPQV 58
           D KLF + V+ +H++L  V
Sbjct: 716 DLKLFAETVQKMHHLLKNV 734


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,295
Number of Sequences: 2123
Number of extensions: 3411
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 8
length of query: 113
length of database: 516,269
effective HSP length: 56
effective length of query: 57
effective length of database: 397,381
effective search space: 22650717
effective search space used: 22650717
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 43 (21.4 bits)