GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001387-TA|BGIBMGA001387-PA|undefined
         (161 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   6.2  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    23   6.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   8.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 79  AASTGPSQPTHR 90
           AA+TGP  PTHR
Sbjct: 913 AAATGPPPPTHR 924


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 127 QLCIRWTTHDTHATFKLS 144
           Q C+RW  H ++ T  L+
Sbjct: 52  QYCLRWNNHQSNLTTVLT 69


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 127 QLCIRWTTHDTHATFKLS 144
           Q C+RW  H ++ T  L+
Sbjct: 52  QYCLRWNNHQSNLTTVLT 69


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 127 QLCIRWTTHDTHATFKLS 144
           Q C+RW  H ++ T  L+
Sbjct: 52  QYCLRWNNHQSNLTTVLT 69


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding
          protein protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 39 VLFESRSRGTYFGKIYDKGKIFHRADKSTSLTVVPQQASIAAS 81
          V   SR+RG  F     KG++    D+  +   V Q+A +  S
Sbjct: 36 VFDSSRTRGKPFKFSVGKGEVIRGWDEGVAQMSVGQRAKLVCS 78


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/22 (50%), Positives = 11/22 (50%)

Query: 29  TSITTRVLTPVLFESRSRGTYF 50
           T   TR   P LFES  R T F
Sbjct: 237 TRWNTRQFDPTLFESALRSTRF 258


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.129    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,600
Number of Sequences: 2123
Number of extensions: 5983
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 161
length of database: 516,269
effective HSP length: 59
effective length of query: 102
effective length of database: 391,012
effective search space: 39883224
effective search space used: 39883224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)