GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001386-TA|BGIBMGA001386-PA|IPR000842|Phosphoribosyl
pyrophosphate synthetase, IPR005946|Ribose-phosphate
pyrophosphokinase, IPR000836|Phosphoribosyltransferase
         (365 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    25   1.1  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    25   1.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   8.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   8.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   8.0  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 230 DRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGAT 289
           D ++++ A++H +R   N +  ++  G   +  AIL D + D   T C       +    
Sbjct: 26  DNVDID-AILHNKRLFDNYLQCLLKKGKCNEEAAILRDVIPDALITGCRKCNDHQKVSVE 84

Query: 290 KVYAIL 295
           KV   L
Sbjct: 85  KVIRFL 90


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 230 DRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGAT 289
           D ++++ A++H +R   N +  ++  G   +  AIL D + D   T C       +    
Sbjct: 26  DNVDID-AILHNKRLFDNYLQCLLKKGKCNEEAAILRDVIPDALITGCRKCNDHQKVSVE 84

Query: 290 KVYAIL 295
           KV   L
Sbjct: 85  KVIRFL 90


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 4   HKSNQSDSVASPLATTSGLVSMKSTITLEDVVNKLDH 40
           HK  Q + V++P ++ +   S  S  ++    +  DH
Sbjct: 143 HKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADH 179


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 74  LGKVVT-KKFSNMETCVEIGESVR 96
           L KVV  KK  N  TC +IG S R
Sbjct: 146 LRKVVPLKKLCNNGTCEDIGNSHR 169


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 4   HKSNQSDSVASPLATTSGLVSMKSTITLEDVVNKLDH 40
           HK  Q + V++P ++ +   S  S  ++    +  DH
Sbjct: 134 HKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADH 170


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.132    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,953
Number of Sequences: 317
Number of extensions: 2825
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 365
length of database: 114,650
effective HSP length: 58
effective length of query: 307
effective length of database: 96,264
effective search space: 29553048
effective search space used: 29553048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)