Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001386-TA|BGIBMGA001386-PA|IPR000842|Phosphoribosyl
pyrophosphate synthetase, IPR005946|Ribose-phosphate
pyrophosphokinase, IPR000836|Phosphoribosyltransferase
(365 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1620.06c |||ribose-phosphate pyrophosphokinase |Schizosaccha... 440 e-124
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 322 6e-89
SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo... 244 1e-65
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 29 1.0
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 29 1.4
SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom... 28 2.4
SPAC630.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.2
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 27 3.2
SPBC409.04c |mis12||kinetochore protein Mis12|Schizosaccharomyce... 27 4.2
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 9.6
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 26 9.6
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.6
>SPCC1620.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 321
Score = 440 bits (1083), Expect = e-124
Identities = 209/316 (66%), Positives = 262/316 (82%), Gaps = 1/316 (0%)
Query: 50 NIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGE 109
+IK+F+G+SHP+LA+K+ R+G+ LGKV ++SN ET V IGESVR EDV+I+Q+G G
Sbjct: 5 SIKIFAGNSHPELAEKVARRIGLSLGKVAVVQYSNRETSVTIGESVRDEDVFILQTGCGS 64
Query: 110 INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGAD 169
IND+LMELLIMINAC+ ASA R+TA+IPCFPYARQDKKDKSRAPITA+LVAN+L +G +
Sbjct: 65 INDHLMELLIMINACRSASARRITAIIPCFPYARQDKKDKSRAPITARLVANMLQTAGCN 124
Query: 170 HIITMDLHASQIQGFFDIPVDNLFAEPAVLKWIKENIPDW-KTSIVVSPDAGGAKRVTSI 228
HIITMDLHASQIQGFF++PVDNL+AEP+VL++I+ENI +++VSPDAGGAKR T++
Sbjct: 125 HIITMDLHASQIQGFFNVPVDNLYAEPSVLRYIRENIDTTVNPTVIVSPDAGGAKRATAL 184
Query: 229 ADRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGA 288
ADRL+++FALIHKER+KANEV+ MVLVGDV+D+ AILVDDMADTCGT+ AA+ L + GA
Sbjct: 185 ADRLDLDFALIHKERQKANEVSRMVLVGDVRDKLAILVDDMADTCGTLGLAAKTLKDNGA 244
Query: 289 TKVYAILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVR 348
VYAI+THGI SG AI IN + LE V+VTNTIP + C KI+ ID+S +LAE +R
Sbjct: 245 KAVYAIVTHGILSGKAIKVINESALEKVIVTNTIPHDDKRSLCSKIETIDISGVLAECIR 304
Query: 349 RTHNGESVSYLFSNVP 364
R H+GESVS LFS P
Sbjct: 305 RIHHGESVSVLFSVAP 320
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 322 bits (790), Expect = 6e-89
Identities = 172/339 (50%), Positives = 227/339 (66%), Gaps = 27/339 (7%)
Query: 48 MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGS 107
M N+ VF SHP L + I + L +D+G+V KFSN ET V I +SVRG DVYIV S
Sbjct: 1 MKNLVVFGTESHPKLTESICEHLCLDIGRVELSKFSNGETSVRIKQSVRGCDVYIVSPAS 60
Query: 108 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQ-DKKDK-SRAPIT---------- 155
G++ND+LMELLIMI+ACK ASA +VTAV+P FPY+RQ D+K S AP++
Sbjct: 61 GQVNDHLMELLIMISACKTASAKKVTAVLPVFPYSRQPDQKFSFSGAPLSDLQDAVVPCK 120
Query: 156 ------------AKLVANILSVSGADHIITMDLHASQIQGFFDIPVDNLFAEPAVLKWIK 203
LVA++L SGADHIITMDLH Q QGFFDIPVDNLF P + +I
Sbjct: 121 KQTGYHPWIAQSGTLVADLLMCSGADHIITMDLHDPQFQGFFDIPVDNLFGRPLLKHYIS 180
Query: 204 ENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDRTA 263
NIP++ +++VSPDAGGAKR T+IAD L ++FALIHK R+ S++LVGDV+++ A
Sbjct: 181 LNIPNYHNAVIVSPDAGGAKRATAIADALGLDFALIHKNRRH-EYGTSLMLVGDVQNKVA 239
Query: 264 ILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPAISRINNACLEAVVVTNTIP 323
IL+DD+ DT T+ AAE + E GA+K+YA++TH + SG AI R+ +C++ ++VTNT P
Sbjct: 240 ILIDDLIDTAYTLVRAAEFVKEHGASKIYALVTHCVLSGDAIERVKLSCIDKLIVTNTAP 299
Query: 324 QERHMQECPKIQCIDVSMMLAEAVRRTHNGESVSYLFSN 362
Q C IDV+ AEA+RR HNGES+S L+ +
Sbjct: 300 QTITPSGC--FDIIDVAPTFAEAIRRIHNGESISILYDH 336
>SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase
Prs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 244 bits (598), Expect = 1e-65
Identities = 114/200 (57%), Positives = 156/200 (78%)
Query: 48 MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGS 107
M + + G SHP+L I +RLGI V K+F+N ET VEI ESVR +DV+I+QSGS
Sbjct: 1 MKSATIIGGGSHPELLHLISNRLGITPCDVSLKRFANGETSVEIRESVRDKDVFILQSGS 60
Query: 108 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSG 167
+ND+LMELLI+I+ACK SA R+TAV+P FPY++Q K K R ITA++VAN+L+V+G
Sbjct: 61 STVNDSLMELLIIISACKGGSAKRITAVMPYFPYSKQSKMRKYRDAITARMVANLLTVAG 120
Query: 168 ADHIITMDLHASQIQGFFDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTS 227
DHIIT+DLHASQ+QGFF PVDNL+AEP + +WI+ N+ DW+ ++VVS + GGAKRVTS
Sbjct: 121 VDHIITLDLHASQMQGFFTRPVDNLYAEPNIAEWIRRNVDDWEEAVVVSKNPGGAKRVTS 180
Query: 228 IADRLNVEFALIHKERKKAN 247
+AD LN++FALI+ +R++++
Sbjct: 181 LADTLNLDFALINTDRQRSS 200
Score = 95.9 bits (228), Expect = 8e-21
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 252 MVLVGDVKDRTAILVDDMADTCGTICHAAEKLIE-AGATKVYAILTHGIFSGPAISRINN 310
+ LVGDV +TA+L+DD + A+E L++ GA +V I THGIF + + +
Sbjct: 294 ITLVGDVNGKTALLIDDTIENPTAFIVASEHLVKRCGAKRVIVIGTHGIFQNKCLKDLQS 353
Query: 311 A-CLEAVVVTNTIP-QERHMQECPKIQCIDVSMMLAEAVRRTHNGESVSYLF 360
+E +VVTNT P + + + EC K+ ID+S +LAEA+RRTHNGES+S+LF
Sbjct: 354 CEYIEQIVVTNTYPIKPQAVLECDKLTVIDISGVLAEAIRRTHNGESISFLF 405
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 29.1 bits (62), Expect = 1.0
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 76 KVVTKKFSNMETCVEIGESV--RGEDVYIVQSGSGEINDNLMELLIMINACKIASASRVT 133
+VVTK S++ C+ G S+ R D+ I + + L+I++ + T
Sbjct: 120 QVVTKNTSHLYDCIRSGVSICNRLLDMEIFEPAISLLMKTHKNLIILLTYRDHDAIPTAT 179
Query: 134 AVIPCFPYARQDKKDKSRAP-ITAKLVANILSVSGADHI-ITMDLHASQIQGFFDIPVDN 191
+ P + + P + A NI ++ + + L SQI G ++N
Sbjct: 180 LLNPTLDVSEIQLESCLFVPMVPASYFLNIGTIVVTFQLNVLRCLSLSQINGLSLNTINN 239
Query: 192 LFAEPAVLKWIKENIP 207
L +E +WI+ + P
Sbjct: 240 LQSEDGPFQWIERSFP 255
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 302 GPAISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRR-THNGESVSY 358
GP I R+ C + TI E +EC + I +L V + HNG+ + +
Sbjct: 169 GPMIQRMQMTCPDCNGAGETIRDEDRCKECDGAKVISQRKILTVHVEKGMHNGQKIVF 226
>SPCC1223.08c |dfr1||dihydrofolate reductase
Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 170 HIITMDLHASQIQGFFDIPVDNLFA-EPAVLK-WIKENIPDWKTSIVVSPDAGGAKRVTS 227
H +T +L ++I + P D+ F EPA W+++ P+ + + + + G K +S
Sbjct: 376 HPLTKNLLFTRIHK--EYPCDSFFPFEPAESSDWVRKAHPELEKFVGIPVEEGRLKAASS 433
Query: 228 IADRLNVEFALIHK 241
+ + +EF L K
Sbjct: 434 NKEEVEIEFELYGK 447
>SPAC630.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 137 PCFPYARQDKKDKSRAPITAKLVANILSVSGADHIITMDLHA 178
PCF Y + K+ K I + V N S G + +DLH+
Sbjct: 93 PCFSYCARLKEPKDLLEIGSVSVDNKCSTCGLFRVSRIDLHS 134
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 177 HASQIQGFFDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRL 232
H S IQ + V+ A + W KE I K S++ PD+ K + ++AD++
Sbjct: 319 HPSDIQRARSL-VECTDAIEQTITWAKEYIKKAKDSLLCLPDSPARKALFALADKV 373
>SPBC409.04c |mis12||kinetochore protein Mis12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 27.1 bits (57), Expect = 4.2
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 183 GFFDIPVDNLFAEPAVLK-WIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFAL--- 238
GF + N+F+ P LK +++ D SI DA + + A++L V+ L
Sbjct: 70 GFEVYTLRNIFSYPPELKGYMRTFGKDVDYSITTEQDAAMDQAIQEAAEKLVVKMQLRRD 129
Query: 239 ----IHKERKKANEVASMV----LVGDVKDRTAILV----DDMADTCGTICHAAEKLIEA 286
+ ++R+K E+ + + V + + + D + D G + HA ++++EA
Sbjct: 130 LRMRLSRKREKKTEIEKHLERISFLNKVPENWQVTLPETTDFLLDQLGNLQHAVKRVVEA 189
Query: 287 GAT 289
T
Sbjct: 190 SPT 192
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.8 bits (54), Expect = 9.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 292 YAILTHGIFSGPAISRINNACLEAV 316
Y +L H F+ P +S AC++A+
Sbjct: 594 YPLLEHLAFASPYVSSFAEACIQAI 618
>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 239 IHKERKKANEVASMVLVGDVKDRTAILVDDMADTC 273
++K+ KK N + +V DVK R D D C
Sbjct: 1 MNKKDKKFNYIFGSEIVNDVKKRLPYYKSDWIDAC 35
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 5 KSNQSDSVASPLATTSGLVSMKSTITLED 33
KS Q +A P T+G V MK+ L D
Sbjct: 710 KSKQHTEIAQPAFNTTGTVLMKTKSNLSD 738
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,492,522
Number of Sequences: 5004
Number of extensions: 56795
Number of successful extensions: 188
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 173
Number of HSP's gapped (non-prelim): 14
length of query: 365
length of database: 2,362,478
effective HSP length: 74
effective length of query: 291
effective length of database: 1,992,182
effective search space: 579724962
effective search space used: 579724962
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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