GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001386-TA|BGIBMGA001386-PA|IPR000842|Phosphoribosyl
pyrophosphate synthetase, IPR005946|Ribose-phosphate
pyrophosphokinase, IPR000836|Phosphoribosyltransferase
         (365 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   7.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   7.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   7.6  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 123 ACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHIITM---DLHAS 179
           AC    AS  +      PY  +   D + AP T+ + A+    +  D I T+    + +S
Sbjct: 156 ACSAKIASHSSTNNSVLPYITESPTDLTDAPTTSNMAAS-GDETDLDAITTLAESGIPSS 214

Query: 180 QIQGFFDIPVDNLFAEPA 197
              G  D  VD+L   PA
Sbjct: 215 NTSG--DDRVDHLLPSPA 230


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 123 ACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHIITM---DLHAS 179
           AC    AS  +      PY  +   D + AP T+ + A+    +  D I T+    + +S
Sbjct: 157 ACSAKIASHSSTNNSVLPYITESPTDLTDAPTTSNMAAS-GDETDLDAITTLAESGIPSS 215

Query: 180 QIQGFFDIPVDNLFAEPA 197
              G  D  VD+L   PA
Sbjct: 216 NTSG--DDRVDHLLPSPA 231


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%)

Query: 265 LVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPAISRINNACLEA 315
           LVD M D C  +   A  +++     VY       +  P I  + N C+ A
Sbjct: 284 LVDAMVDACDIVMQRAPNVLQHQHRDVY-------WWAPVIEELRNECIAA 327


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,891
Number of Sequences: 2123
Number of extensions: 12213
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 3
length of query: 365
length of database: 516,269
effective HSP length: 65
effective length of query: 300
effective length of database: 378,274
effective search space: 113482200
effective search space used: 113482200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)