Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001386-TA|BGIBMGA001386-PA|IPR000842|Phosphoribosyl
pyrophosphate synthetase, IPR005946|Ribose-phosphate
pyrophosphokinase, IPR000836|Phosphoribosyltransferase
(365 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 / ... 282 3e-76
At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 / ... 282 3e-76
At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 / ... 278 4e-75
At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase, put... 276 1e-74
At1g10700.1 68414.m01217 ribose-phosphate pyrophosphokinase 3 / ... 80 3e-15
At2g42910.1 68415.m05316 ribose-phosphate pyrophosphokinase 4 / ... 66 5e-11
At3g27190.1 68416.m03400 uracil phosphoribosyltransferase, putat... 33 0.40
At5g40870.1 68418.m04963 uracil phosphoribosyltransferase, putat... 31 0.92
At1g26900.1 68414.m03280 pentatricopeptide (PPR) repeat-containi... 31 1.6
At5g01940.1 68418.m00113 eukaryotic translation initiation facto... 30 2.8
At5g24110.1 68418.m02833 WRKY family transcription factor 29 3.7
At1g68640.1 68414.m07843 bZIP family transcription factor (PERIA... 29 3.7
At5g66950.1 68418.m08440 expressed protein 29 4.9
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 29 6.5
At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 29 6.5
At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 29 6.5
At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 29 6.5
At4g37050.1 68417.m05247 patatin, putative similar to patatin-li... 28 8.5
>At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 403
Score = 282 bits (691), Expect = 3e-76
Identities = 143/312 (45%), Positives = 208/312 (66%), Gaps = 4/312 (1%)
Query: 51 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEI 110
+K+FSG+++P LAQ+I +G+DLGKV K+F++ E V++ ESVRG DVY+VQ
Sbjct: 93 LKLFSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPT 152
Query: 111 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADH 170
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 153 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 212
Query: 171 IITMDLHASQIQGFFDIPVDNLFAEPAVLKWI-KENIPDWKTSIVVSPDAGGAKRVTSIA 229
++ DLH+ Q G+FDIPVD+++ +P +L ++ ++IP + +VVSPD GG R + A
Sbjct: 213 VLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKSIPS-EDLVVVSPDVGGVARARAFA 271
Query: 230 DRL-NVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGA 288
+L + A++ K R N M L+GDV+ + AI+VDDM DT GTI A L + GA
Sbjct: 272 KKLSDAPLAIVDKRRSGHNVAEVMNLIGDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGA 331
Query: 289 TKVYAILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVR 348
+VYA TH +FS PAI R++ L+ V+VTNT+P P++ + V+ +L E +
Sbjct: 332 REVYACCTHAVFSPPAIERLSGGLLQEVIVTNTLP-VAEKNYFPQLTILSVANLLGETIW 390
Query: 349 RTHNGESVSYLF 360
R H+ SVS +F
Sbjct: 391 RVHDDSSVSSIF 402
>At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 352
Score = 282 bits (691), Expect = 3e-76
Identities = 143/312 (45%), Positives = 208/312 (66%), Gaps = 4/312 (1%)
Query: 51 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEI 110
+K+FSG+++P LAQ+I +G+DLGKV K+F++ E V++ ESVRG DVY+VQ
Sbjct: 42 LKLFSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPT 101
Query: 111 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADH 170
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 102 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 161
Query: 171 IITMDLHASQIQGFFDIPVDNLFAEPAVLKWI-KENIPDWKTSIVVSPDAGGAKRVTSIA 229
++ DLH+ Q G+FDIPVD+++ +P +L ++ ++IP + +VVSPD GG R + A
Sbjct: 162 VLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKSIPS-EDLVVVSPDVGGVARARAFA 220
Query: 230 DRL-NVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGA 288
+L + A++ K R N M L+GDV+ + AI+VDDM DT GTI A L + GA
Sbjct: 221 KKLSDAPLAIVDKRRSGHNVAEVMNLIGDVRGKVAIMVDDMIDTAGTIVKGAALLHQEGA 280
Query: 289 TKVYAILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVR 348
+VYA TH +FS PAI R++ L+ V+VTNT+P P++ + V+ +L E +
Sbjct: 281 REVYACCTHAVFSPPAIERLSGGLLQEVIVTNTLP-VAEKNYFPQLTILSVANLLGETIW 339
Query: 349 RTHNGESVSYLF 360
R H+ SVS +F
Sbjct: 340 RVHDDSSVSSIF 351
>At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 /
phosphoribosyl diphosphate synthetase 2 (PRS2) identical
to SP:Q42583 from [Arabidopsis thaliana]; strong
similarity to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 400
Score = 278 bits (682), Expect = 4e-75
Identities = 138/311 (44%), Positives = 205/311 (65%), Gaps = 2/311 (0%)
Query: 51 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEI 110
+K+FSG+++P L+Q+I +G++LGKV K+F++ E V++ ESVRG DV++VQ
Sbjct: 90 LKLFSGTANPALSQEIAWYMGLELGKVSIKRFADGEIYVQLKESVRGCDVFLVQPTCTPT 149
Query: 111 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADH 170
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 150 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 209
Query: 171 IITMDLHASQIQGFFDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIAD 230
++ DLH+ Q G+FDIPVD+++ +P +L ++ + +VVSPD GG R + A
Sbjct: 210 VLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKSISSEDLVVVSPDVGGVARARAFAK 269
Query: 231 RL-NVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGAT 289
+L + A++ K R N M L+GDVK + A++VDD+ DT GTI A L E GA
Sbjct: 270 KLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDIIDTAGTIVKGAALLHEEGAR 329
Query: 290 KVYAILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRR 349
+VYA TH +FS PAI R+++ L+ V+VTNT+P P++ + V+ +L E + R
Sbjct: 330 EVYACCTHAVFSPPAIERLSSGLLQEVIVTNTLP-VAEKNYFPQLTILSVANLLGETIWR 388
Query: 350 THNGESVSYLF 360
H+ SVS +F
Sbjct: 389 VHDDSSVSSIF 399
>At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase,
putative / phosphoribosyl diphosphate synthetase,
putative very strong similarity to phosphoribosyl
pyrophosphate synthase [Spinacia oleracea] GI:4902849;
contains Pfam profile PF00156: Phosphoribosyl
transferase domain
Length = 394
Score = 276 bits (677), Expect = 1e-74
Identities = 140/315 (44%), Positives = 204/315 (64%), Gaps = 5/315 (1%)
Query: 39 DHVLPLTTRMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGE 98
D + TTR+ ++FSG+++P LAQ+I LG+DLGK+ K+F++ E V++ ESVRG
Sbjct: 69 DSIYQNTTRL---RIFSGTANPILAQEISCYLGLDLGKIKIKRFADGEIYVQLQESVRGC 125
Query: 99 DVYIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKL 158
DV++VQ N+NLMELL+MI+AC+ ASA +TAVIP F YAR D+K + R I AKL
Sbjct: 126 DVFLVQPTCPPANENLMELLVMIDACRRASAKTITAVIPYFGYARADRKTQGRESIAAKL 185
Query: 159 VANILSVSGADHIITMDLHASQIQGFFDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPD 218
VAN+++ SGAD ++ DLH+ Q G+FDIPVD+++ +P +L ++ + +VVSPD
Sbjct: 186 VANLITQSGADRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKAISSEDLVVVSPD 245
Query: 219 AGGAKRVTSIADRL-NVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTIC 277
GG R + A +L + A++ K R N M L+GDVK + AI+VDDM DT GTI
Sbjct: 246 VGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAIMVDDMIDTAGTIS 305
Query: 278 HAAEKLIEAGATKVYAILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCI 337
A L + GA +VYA TH +FS PAISR+++ + V++TNTIP P++ +
Sbjct: 306 KGAALLHQEGAREVYACTTHAVFSPPAISRLSSGLFQEVIITNTIPLS-EKNYFPQLTVL 364
Query: 338 DVSMMLAEAVRRTHN 352
V+ +L E + R H+
Sbjct: 365 SVANLLGETIWRVHD 379
>At1g10700.1 68414.m01217 ribose-phosphate pyrophosphokinase 3 /
phosphoribosyl diphosphate synthetase 3 (PRS3) nearly
identical to phosphoribosyl diphosphate synthase
GI:4902470 from [Arabidopsis thaliana]
Length = 411
Score = 79.8 bits (188), Expect = 3e-15
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 14/257 (5%)
Query: 53 VFSGSSHPDLAQKIVDRLG-IDLGKVVTKKFSN--METCVEIGESVRGEDVYIVQSGSGE 109
+F DLA++IV + I+L + KKF + ++ + +RG+ V + S S
Sbjct: 103 LFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSP 162
Query: 110 INDNLMELLIMINACKIASASRVTAVIPCFPYAR----QDKKDKSRAPITAKLVANI-LS 164
+ E L +I A S T V+P FP +D+ D + A A++++NI S
Sbjct: 163 AV--IFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTS 220
Query: 165 VSGADHIITMDLHASQIQGFFDIPVDNLFAEPA-VLKWIKENIPDWKTSIVVSPDAGGAK 223
G ++T D+HA Q + +F + F +LK +++PD + PD G K
Sbjct: 221 RGGPTSLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDDGAWK 280
Query: 224 RVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKL 283
R +L ++ + + ++ + GD + R ++VDD+ + GT+ + L
Sbjct: 281 RFHK---QLQHYPTIVCNKVRMGDKRIVRIKEGDAEGRHVVIVDDLVQSGGTLIECQKVL 337
Query: 284 IEAGATKVYAILTHGIF 300
GA K+ A +THGIF
Sbjct: 338 AAHGAAKISAYVTHGIF 354
>At2g42910.1 68415.m05316 ribose-phosphate pyrophosphokinase 4 /
phosphoribosyl diphosphate synthetase 4 (PRS4) identical
to phosphoribosyl diphosphate synthase (prs4)
[Arabidopsis thaliana] GI:4902472
Length = 337
Score = 65.7 bits (153), Expect = 5e-11
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 95 VRGEDV-YIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKK-DKSRA 152
+RG+ V ++ S + + ++ ++ +AS + V P + R +++ D + A
Sbjct: 75 IRGQHVAFLASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATA 134
Query: 153 PITAKLVANI-LSVSGADHIITMDLHASQIQGFFDIPVDNLFAE--PAVLKWIKENIPDW 209
A++V+NI +S G ++ D+HA Q + +F V LF P + K +++ +P+
Sbjct: 135 FTMARIVSNIPISRGGPTSVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQ-LPET 193
Query: 210 KTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDM 269
+ IV PD G KR + D + K R+ + + G+ ++VDD+
Sbjct: 194 EKVIVAFPDDGAWKRFHKLLDHYPT--VVCTKVREGDKRIVRLK-EGNPAGCHVVIVDDL 250
Query: 270 ADTCGTICHAAEKLIEAGATKVYAILTHGIF 300
+ GT+ + L GA KV A +THG+F
Sbjct: 251 VQSGGTLIECQKVLAAHGAVKVSAYVTHGVF 281
>At3g27190.1 68416.m03400 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 483
Score = 32.7 bits (71), Expect = 0.40
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 238 LIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTH 297
LIH++ ++ L D+ +R +L+D + T + A E LI+ G + + I +
Sbjct: 373 LIHRDGDNGMQLIYEKLPSDISERHVLLLDPVLGTGNSANQAIELLIQKGVPEAHIIFLN 432
Query: 298 GIFSGPAISRINNACLEAVVVTNTIPQ 324
I + I + + +VT+ I Q
Sbjct: 433 LISAPEGIHCVCKRFPKLKIVTSEIDQ 459
>At5g40870.1 68418.m04963 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 486
Score = 31.5 bits (68), Expect = 0.92
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 238 LIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTH 297
LIH++ ++ L D+ +R +L+D + T + A E LI+ G + + I +
Sbjct: 373 LIHRDGDNGKQLIYEKLPHDISERHVLLLDPVLATGNSANQAIELLIQKGVPEAHIIFLN 432
Query: 298 GIFSGPAISRINNACLEAVVVTNTIPQ 324
I + I + +VT+ I Q
Sbjct: 433 LISAPEGIHCVCKRFPALKIVTSEIDQ 459
>At1g26900.1 68414.m03280 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 572
Score = 30.7 bits (66), Expect = 1.6
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 20 SGLVSMKSTITLEDVVNKLDHVLPLTTRMPN--IKVFSGSSHPDLAQKIVDRL---GIDL 74
S L++ S + + + +HV M N I+ +S S P+ A + ++L G+ L
Sbjct: 64 SKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL 123
Query: 75 GK---VVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEINDNLMELLIMINAC-KIASAS 130
+ + T K + E CV IGE + G ++SG D L+ C KI+ A
Sbjct: 124 DRFSFITTLKSCSRELCVSIGEGLHG---IALRSGFMVFTDLRNALIHFYCVCGKISDAR 180
Query: 131 RVTAVIP 137
+V +P
Sbjct: 181 KVFDEMP 187
>At5g01940.1 68418.m00113 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|P41035 Eukaryotic translation initiation factor 2
subunit (eIF-2-beta) {Oryctolagus cuniculus}; contains
Pfam profile PF01873: Domain found in IF2B/IF5
Length = 231
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 203 KENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDRT 262
++N+PD ++S PD G + ++ + DRL E + ER + + +L + T
Sbjct: 57 EDNLPDCQSSRKFEPDYGYKELLSMVFDRLREEDVEVSTERPRTVMMPPQLLA----EGT 112
Query: 263 AILVDDMADTCGTI 276
+ + AD C T+
Sbjct: 113 ITVCLNFADLCRTM 126
>At5g24110.1 68418.m02833 WRKY family transcription factor
Length = 303
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 190 DNLFAEPAVLKWIKENIPDWKTSIVVSPDAG 220
D+ EP V+K K+++P W + + ++P AG
Sbjct: 77 DDSDQEPLVIKSSKKSMPRWSSKVRIAPGAG 107
>At1g68640.1 68414.m07843 bZIP family transcription factor
(PERIANTHIA) identical to transcription factor
PERIANTHIA GB:AAD19660 GI:4378757 from [Arabidopsis
thaliana]
Length = 452
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 49 PNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSG 108
PN+ + S + H ++D G G + + E C++ G+ V + +V G G
Sbjct: 48 PNVTIASANLHYTTFDTVMDCGGGGGGGLRERLEGGEEECLDTGQLVYQKGTRLVGGGVG 107
Query: 109 EINDN 113
E+N +
Sbjct: 108 EVNSS 112
>At5g66950.1 68418.m08440 expressed protein
Length = 870
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 55 SGSSHPDLAQKIVDRLGIDLG 75
SG HP++ QK+ +R GI LG
Sbjct: 766 SGMVHPEIVQKLAEREGISLG 786
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 80 KKFSNMETCVEI---GESVRGEDVYIVQSGSGEINDNLMEL 117
KKFSN T ++ GE + G D+ I SGE+ D +L
Sbjct: 212 KKFSNWPTFPQLYCNGELLGGADIAIAMHESGELKDAFKDL 252
>At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/85 (22%), Positives = 36/85 (42%)
Query: 238 LIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTH 297
LIH+E ++ L D+ +R +L+D + T + A LI G + I +
Sbjct: 355 LIHREGDNGQQLIYEKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLN 414
Query: 298 GIFSGPAISRINNACLEAVVVTNTI 322
I + ++ + +VT+ I
Sbjct: 415 LISAPEGVNVVCKKFPRIKIVTSEI 439
>At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/85 (22%), Positives = 36/85 (42%)
Query: 238 LIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTH 297
LIH+E ++ L D+ +R +L+D + T + A LI G + I +
Sbjct: 355 LIHREGDNGQQLIYEKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLN 414
Query: 298 GIFSGPAISRINNACLEAVVVTNTI 322
I + ++ + +VT+ I
Sbjct: 415 LISAPEGVNVVCKKFPRIKIVTSEI 439
>At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/85 (22%), Positives = 36/85 (42%)
Query: 238 LIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTH 297
LIH+E ++ L D+ +R +L+D + T + A LI G + I +
Sbjct: 355 LIHREGDNGQQLIYEKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLN 414
Query: 298 GIFSGPAISRINNACLEAVVVTNTI 322
I + ++ + +VT+ I
Sbjct: 415 LISAPEGVNVVCKKFPRIKIVTSEI 439
>At4g37050.1 68417.m05247 patatin, putative similar to patatin-like
latex allergen [Hevea brasiliensis][PMID:10589016];
contains patatin domain PF01734
Length = 339
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 68 DRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGE---INDNLMELLIMINAC 124
D L DLG V NME VE+GE++ + V V SG I++N+ +
Sbjct: 261 DSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLESGHYQPISENVTNEEALKRFA 320
Query: 125 KIASASR 131
K+ S R
Sbjct: 321 KVLSEER 327
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,770,054
Number of Sequences: 28952
Number of extensions: 299615
Number of successful extensions: 808
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 782
Number of HSP's gapped (non-prelim): 19
length of query: 365
length of database: 12,070,560
effective HSP length: 82
effective length of query: 283
effective length of database: 9,696,496
effective search space: 2744108368
effective search space used: 2744108368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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