Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001385-TA|BGIBMGA001385-PA|IPR002937|Amine oxidase
(470 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 3e-45
SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19) 62 1e-09
SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13) 58 1e-08
SB_36698| Best HMM Match : Heme_oxygenase (HMM E-Value=2.5) 53 4e-07
SB_56095| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_8406| Best HMM Match : UCR_UQCRX_QCR9 (HMM E-Value=3) 47 3e-05
SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003) 44 2e-04
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 43 5e-04
SB_50452| Best HMM Match : Nepo_coat_N (HMM E-Value=7.2) 41 0.002
SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.030
SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.040
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.093
SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.16
SB_32688| Best HMM Match : PAZ (HMM E-Value=7.7) 33 0.49
SB_11278| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.86
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 32 1.1
SB_33315| Best HMM Match : eRF1_1 (HMM E-Value=6.1) 31 1.5
SB_2542| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_38188| Best HMM Match : rve (HMM E-Value=5.7e-31) 31 2.6
SB_22187| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_53791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.1
SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8) 29 8.1
SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05) 29 8.1
>SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 180 bits (437), Expect = 3e-45
Identities = 133/452 (29%), Positives = 214/452 (47%), Gaps = 38/452 (8%)
Query: 29 LEAADRIGGRICTIEYGDSTLDIGAAWCHGEKDNIVFELAEPLGL-LGRPDPHDS----- 82
LEA+ RIGGRI T + +++GA W H N +++ A + + L + D+
Sbjct: 34 LEASSRIGGRIHTSTINNEVVELGAGWIHDSTSNPLYDAAREINVVLSKGFNCDASEFGS 93
Query: 83 --WYVLSNGDLAPDATCKEILANIDE--EVCK---SHKNNVQSISQFVRNAV-NTKETFK 134
+Y L + P E+ ++ + CK S N + + N + E
Sbjct: 94 VTFYTLGQANELPTKLANEVYEAYEKIYDDCKTTASELNESLGLGIYYGNKFEHYLENNA 153
Query: 135 QFPRLTRSLLEVYERNN-HLGGQDDPQHGKSLKGLDEHWPCEGE-FLLNWRGRGYKTLLD 192
+ L RSL E RN H G ++ +K E+ E + F L GY LL+
Sbjct: 154 EHSSLKRSLFEWIMRNECHSSGVKSLEN-VDIKSSPEYSVDEKDSFTLP---HGYNKLLE 209
Query: 193 VLLNKYPDPNEAIPVQILLNKHVECIRWGTSQPSHQISPLVQVKCTDGSLYAAKSVIVTL 252
+ + D +E + N V I+W +P S +V + C++G ++ A+ VIVTL
Sbjct: 210 RI---FEDLDEET---VRFNHEVVSIKW-KPKPEETSSSVVSITCSNGEIFTAEHVIVTL 262
Query: 253 PLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEFTTPWWPKSAGKFVILWQEED 312
PL VLK H +F+PPLPQ K ++IN L Y +++IY+ F +W +LW D
Sbjct: 263 PLGVLKSRHEVIFNPPLPQIKKDAINRLGYGTINRIYLVFEKAFWSNEIKGMGLLWTNLD 322
Query: 313 KAKFTKEEHWITEIYGLDPVQHQPNVLLAWIYGKGAEAMEKVSFDDLKAGIDKLLSIFKK 372
+ W+ E+Y P NVL+ W+ G+ A +E +S ++ ++L F
Sbjct: 323 SNNWPS---WVKELYIFYPTHKGSNVLVTWLSGEAAIQIESISDQEIAHECTRVLKAFTG 379
Query: 373 KFPVTPVKSVLRSQWASNLLARSAYAYRCVATEENGASATTLSEPIYH------GNGLPL 426
+ +K V++++W SN L+R +Y Y + GA L+ P+ H GN
Sbjct: 380 LKEIPGIKEVMKTKWHSNKLSRGSYTY--IPRYSGGADIDILASPLPHLEGEAQGNVPCK 437
Query: 427 VCFAGEATSYHRHSAVHGAVESGFREAQRLMD 458
+ FAGEAT+ ++ HGA SG REA+R++D
Sbjct: 438 ILFAGEATNRSAYATTHGAYISGVREAKRILD 469
>SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)
Length = 438
Score = 61.7 bits (143), Expect = 1e-09
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 23/241 (9%)
Query: 221 GTSQPSHQISPLVQVKCTDGSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSL 280
G + SH V +K G + +A V++T+PL +LK+ +FSPPLP++K +I L
Sbjct: 195 GQTSSSHDQDMQVTLKSNSGEIISANYVVITVPLTILKDGDI-IFSPPLPREKELAIERL 253
Query: 281 HYCVLDKIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITE----IYGLDPVQHQP 336
H KI F P+W +S V +T+++H E + G +H
Sbjct: 254 HMSTALKIVCRFKKPFWGQSKIVDVAHGFISQIWTYTRDQHVDCEECHVLVGFQSAEHA- 312
Query: 337 NVLLAWIYGKGAEAMEKVSFDDLKAGIDKLLSIFKKKFPVTP-VKSVLRSQWASNLLARS 395
+ ++V D +D++ + P + S + W+ + R
Sbjct: 313 --------AQKVHLEKEVVRDRFLEQLDQIFGSHENPRPASQCFMSCVYYHWSKHPYVRG 364
Query: 396 AYAYRCVATEENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREAQR 455
Y+ ++ + L++P+ +G + FAGEAT + V A+E+G R A
Sbjct: 365 GYS---ASSAHAYGMRSDLAKPV---SG--RLFFAGEATHVTNPATVQAAIETGRRAASE 416
Query: 456 L 456
+
Sbjct: 417 V 417
>SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13)
Length = 482
Score = 58.4 bits (135), Expect = 1e-08
Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 33/304 (10%)
Query: 165 LKGLDEHWPCEGEFLLNWRGRG-YKTLLDVLLNKYPDPNEAIPVQILLNKHVECIRWGTS 223
L G+ E C +N+R G Y L+ L K P I N V I W +
Sbjct: 191 LLGVAEEEECWDYGPVNYRLEGSYAVLVSHYLKKCP------VADIRTNWPVRQITW-SG 243
Query: 224 QPSHQISPLVQVKCTD--GSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLH 281
Q S + +QV T+ G +A V++T+PL +LK+ +FSPPLP++K +I LH
Sbjct: 244 QNSTSNAQDMQVTLTNNIGETLSANYVVITVPLTILKDGDI-IFSPPLPREKELAIERLH 302
Query: 282 YCVLDKIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITE----IYGLDPVQHQPN 337
KI F P+W + +V +T+++H E + G +H
Sbjct: 303 MGTALKIVCRFGKPFWGPTQFIYVTHGFISQIWTYTRDQHVDGEECHVLVGFQSAEHA-- 360
Query: 338 VLLAWIYGKGAEAMEKVSFDDLKAGIDKLLSIFKKKFPVTP-VKSVLRSQWASNLLARSA 396
+ E+V D +D++ P + S + W+ + R
Sbjct: 361 -------AQKVHLEEEVVRDRFLEQLDQIFGSHGNPRPASQCFMSCVYYHWSKHPYVRGG 413
Query: 397 YAYRCVATEENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREAQRL 456
Y+ ++ L++PI +G + FAGEAT + V A+E+G R A +
Sbjct: 414 YS---ASSAHAYGMRRELAKPI---SG--RLFFAGEATHVTNPATVQAAIETGRRAASEV 465
Query: 457 MDSF 460
++
Sbjct: 466 FRAY 469
>SB_36698| Best HMM Match : Heme_oxygenase (HMM E-Value=2.5)
Length = 240
Score = 53.2 bits (122), Expect = 4e-07
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 233 VQVKCTD--GSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYI 290
+QV T+ G +A V++T+PL +LK+ +FSPPLP++K +I LH KI
Sbjct: 11 MQVTLTNNIGETLSANYVVITVPLTILKDGDI-IFSPPLPREKELAIERLHMGTALKIVC 69
Query: 291 EFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITE----IYGLDPVQHQPNVLLAWIYGK 346
F P+W + +V +T+++H E + G +H +
Sbjct: 70 RFGKPFWGPTQFIYVTHGFISQIWTYTRDQHVDGEECHVLVGFQSAEHA---------AQ 120
Query: 347 GAEAMEKVSFDDLKAGIDKLLSIFKKKFPVTP-VKSVLRSQWASNLLARSAYAYRCVATE 405
E+V D +D++ P + S + W+ + R Y+ ++
Sbjct: 121 KVHLEEEVVRDRFLEQLDQIFGSHGNPRPASQCFMSCVYYHWSKHPYVRGGYS---ASSA 177
Query: 406 ENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREAQRLMDSF 460
L++PI +G + FAGEAT + V A+E+G R A + ++
Sbjct: 178 HAYGMRRELAKPI---SG--RLFFAGEATHVTNPATVQAAIETGRRAASEVFRAY 227
>SB_56095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 50.4 bits (115), Expect = 3e-06
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 16/136 (11%)
Query: 338 VLLAWIYGKGAEAMEKVSFDDLKA-GIDKLLSIFKKKFPVTPVKSVLRSQWASNLLARSA 396
VL++ + G+ A+ +E V D + + + L IF P +SV+ ++W S+ +R +
Sbjct: 3 VLISLVAGEAADNLENVPDDIIVSRAVGVLRGIFGASNVPNPKESVV-TRWKSDEWSRGS 61
Query: 397 YAYRCVATEENGASATTLSEPIYH--------GNGLPL----VCFAGEATSYHRHSAVHG 444
Y+Y VA +G ++ P+ G PL V FAGE T + + VHG
Sbjct: 62 YSY--VAAGSSGNDYDLMASPVAPLPTANVAPGTPQPLNPPRVFFAGEHTIRNYPATVHG 119
Query: 445 AVESGFREAQRLMDSF 460
A+ SG REA R+ D F
Sbjct: 120 ALLSGLREAGRIADQF 135
>SB_8406| Best HMM Match : UCR_UQCRX_QCR9 (HMM E-Value=3)
Length = 342
Score = 47.2 bits (107), Expect = 3e-05
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 233 VQVKCTDGSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEF 292
V V TDG Y+ + + T VL T FSPPLP+ K+ SI + KI+++F
Sbjct: 35 VTVTTTDGRTYSGRYSLCTFSTGVLA-TDMVNFSPPLPEWKMESIYKVPMRYYTKIFLQF 93
Query: 293 TTPWWPKSAGKFVILWQEEDKAKFTKEEHWI-TEIYGLDPVQHQPNVLLAWIYGKGAEAM 351
T +W + IL+ +++ + W+ + GL P +L + G A +
Sbjct: 94 PTDFWDDNE---FILYAHKNRGHY---PIWMDIDRPGLAP---GSKILHVTVTGDEALRV 144
Query: 352 EKVSFDDLKAGI-DKLLSIFKKKFPVTPVKSVLRSQWASNLLARSAYAYRCVATEENGAS 410
E S ++ KA I +L ++ P P+ S+W+ N R ++ + T +
Sbjct: 145 EGQSDEETKAEIMRELRKVYGSDIP-EPI-DFFYSRWSRNNFTRGSFPNVMIGTTKEDFH 202
Query: 411 ATTLSEPIYHGNGLPLVCFAGEATSY 436
GN + + FAG+AT Y
Sbjct: 203 N-------LQGN-VKSLYFAGDATEY 220
>SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003)
Length = 658
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 239 DGSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEFTTPWWP 298
DG VI+T+PL++LK+ + FSPPLP +K +I+S+ KI F T +W
Sbjct: 229 DGEPIHVDYVIITVPLSILKDGDIR-FSPPLPFEKQQAIDSIKVGSALKIICRFRTRFWQ 287
Query: 299 KS 300
K+
Sbjct: 288 KT 289
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 19 LHDAGLRVLGLEAADRIGGRIC-TIEY-GDSTLDIGAAWCHGEK 60
L D G V LEAAD GGR+ + + G + +D+GA + HG++
Sbjct: 26 LIDKGFDVKLLEAADYFGGRVIQALPFPGFAPVDLGAEFIHGDR 69
>SB_31903| Best HMM Match : Amino_oxidase (HMM
E-Value=3.36312e-44)
Length = 1021
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 19 LHDAGLRVLGLEAADRIGGRICTIEYGDSTLDIGAAWCH 57
LH+ G+ + LEA D IGGR+ ++E+ + +++ GA W H
Sbjct: 58 LHEEGVGFIVLEAKDYIGGRVRSVEFAEGSIETGANWIH 96
Score = 39.9 bits (89), Expect = 0.004
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 233 VQVKCTDGSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEF 292
V V T+G++Y A+ I T VL F P LP+ K ++++ + KI+++F
Sbjct: 791 VTVNLTNGNVYTAEHAICTFSSGVLNNGLVN-FIPRLPKWKQDALSKVPMSFYTKIFLKF 849
Query: 293 TTPWWPKSAGKFVILWQEEDKAKFTKEEHWITEIYGLDPVQ-HQPNVLLAWIYGKGAEAM 351
+W K IL + + F ++ P+ + VL+A I G A +
Sbjct: 850 QIKFW---EDKEFILHASKRRGDF--------PVFQNVPINTKEGGVLMATITGSEALRI 898
Query: 352 EKVSFDDLKAGIDKLLSIFKKKFPVTPVKS-VLRSQWASNLLARSAYA 398
E S +D ++ ++++ ++ + V P + + ++W+ + R AY+
Sbjct: 899 ENQSDEDTRS---EVMATLRQLYGVIPEPTEMFYARWSKDPYTRGAYS 943
>SB_50452| Best HMM Match : Nepo_coat_N (HMM E-Value=7.2)
Length = 113
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 248 VIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEFTTPWW 297
+IVTLPLAVLK + + F+PP+ K +I L +++K+ ++F+ +W
Sbjct: 33 IIVTLPLAVLKAGNVK-FNPPISTTKSRAIEKLGAGLIEKVIMKFSRNFW 81
>SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 37.1 bits (82), Expect = 0.030
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 187 YKTLLDVLLNKYPDPNEAIPVQILLNKHVECIRWGTSQPSHQISP---LVQVKCTDGSLY 243
Y +LLD+ ++ A + ++L + V + +QP I + ++ +G+ Y
Sbjct: 354 YFSLLDI--HRLSKKGGAFQIPVILAEKVGMDKVRLNQPVTMIKQDEDKIHIQTRNGTTY 411
Query: 244 AAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEFTTPWW 297
AK+ I+ +P + FSPPLP + ++S+ L K ++T +W
Sbjct: 412 TAKAAIIAIPPTQANKIE---FSPPLPYMQRRILDSMCPSNLTKFIATYSTAFW 462
>SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 36.7 bits (81), Expect = 0.040
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 233 VQVKCTDGSLYAAKSVIVTLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEF 292
V+V + G +Y+A V+ T VL + F PPLP+ K + S + KI+++F
Sbjct: 191 VEVTTSSGDVYSADYVVCTFSTGVLASDMVE-FVPPLPKWKQEAYLSHPMSIYTKIFLKF 249
Query: 293 TTPWW 297
+W
Sbjct: 250 DHKFW 254
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 35.5 bits (78), Expect = 0.093
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 23 GLRVLGLEAADRIGGRICTIEYGD-STLDIGAAWCHGEKDNIVFELAEPLGL 73
GL V+ LEA DR+GGR T+E DIG A+ G V L E LGL
Sbjct: 1214 GLDVIVLEARDRVGGRTHTLEDPSFKYCDIGGAYI-GSTQTRVNSLVEELGL 1264
>SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 34.7 bits (76), Expect = 0.16
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 17 RKLHDAGLRVLGLEAADRIGGRICTIEYGDSTLDIGA 53
R+L G+ V +EA +R+GGR+ T G D+GA
Sbjct: 267 RQLQSFGIDVTMVEARERVGGRVATFRKGQYIADLGA 303
>SB_32688| Best HMM Match : PAZ (HMM E-Value=7.7)
Length = 665
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 202 NEAIPVQILLNKHVECIRWGTSQPSHQISPLVQV-KCTDGSLYAAKSVIVTLPLAVLKE- 259
N +I + + +++H T QP+H I+PLV + + T Y + +++VT+P +K+
Sbjct: 452 NHSIALLVTISRHT------TKQPNHSITPLVTIPRHTMKQRYHSITLLVTIPRHTMKQR 505
Query: 260 THAQLFSPPLPQDKINSINSL 280
H+ + +P+ + N L
Sbjct: 506 NHSIVLLVTVPRHTMKQRNHL 526
>SB_11278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 32.3 bits (70), Expect = 0.86
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 32 ADRIGGRICTIEYGDSTLDIGAAWCHGEKDNIVFELAEPLGLL 74
+ RIGG I T + +++GA W H N +++ A + ++
Sbjct: 18 SSRIGGSIHTSTINNEVVELGAGWIHDSTSNPLYDAAREINVV 60
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 19 LHDAGLRVLGLEAADRIGGRIC-TIEY-GDSTLDIGAAWCHGEK 60
L D G V LEAAD GGR+ + + G + +D+GA + HG++
Sbjct: 1926 LIDKGFDVKLLEAADYFGGRVMQALPFPGFAPVDLGAEFIHGDR 1969
>SB_33315| Best HMM Match : eRF1_1 (HMM E-Value=6.1)
Length = 585
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 335 QPNVLLAWIYGKGAEAMEKVSFDDLKAGIDKLLSIFKKKFPV 376
+ VLL I+G G + M + + +A + LLS F+KK+P+
Sbjct: 437 ETEVLLRQIFGSGEQDMNCLVSQNTEAAYNTLLSTFQKKWPM 478
>SB_2542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 291 EFTTPWWPKSAGKFVIL----WQEEDKAKFTKEEHWITEIYGLDPVQHQPNVLLAWIYGK 346
EF W P S F++ W E A+ E H E++G P +PN + + G
Sbjct: 108 EFVRVWAPTSPNGFIVFIKDGWAGEKNAQQLNEAHVFVEVWGKGP---EPNFDIDTVIGN 164
Query: 347 G 347
G
Sbjct: 165 G 165
>SB_38188| Best HMM Match : rve (HMM E-Value=5.7e-31)
Length = 836
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 23 GLRVLGLEAADRIGGRICT-IEYGDSTLDIGAAWCHGEKDNIVFELAEPLGL 73
G+ L LEA DR+GGR T ++ D+G A+ G N + +A+ LG+
Sbjct: 571 GVDTLVLEARDRVGGRTETLVDPRFKYTDLGGAYV-GPTQNRILRVAKELGV 621
>SB_22187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 77 PDPHDSWYVLSNGDLAPDATCKEILANIDEEVCKSHKNNVQSI 119
P+P+ Y L N D P+ T K+++ + E++ + N+V ++
Sbjct: 100 PNPNMGDYFLRNADEFPNVTIKKVITGVAEDMSELADNSVAAV 142
>SB_53791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 17 RKLHDAGLRVLGLEAADRIGGRICTIEYGDSTLDIGAAWCHGEKDNIVFELAEPLGL 73
R+L + + EA++R+GGR+ T+E + G + H + ++ ++E LGL
Sbjct: 275 RELLGSSAEIDVYEASNRVGGRLDTVEVAGQRFEAGGSIIHSGQQHMQSFVSE-LGL 330
>SB_49238| Best HMM Match : Metallothionein (HMM E-Value=2.8)
Length = 293
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 409 ASATTLSEPIYHGNGLPL---VCFAGEATSYHRHSAVHGAVESGFREAQRLM 457
+S T L+ + H P+ + FAGEAT+ + V A+E+G R A+ ++
Sbjct: 227 SSPTALAHGLRHHLASPVSGRLFFAGEATNVKVSATVPSAIETGERAAEEVL 278
>SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05)
Length = 1130
Score = 29.1 bits (62), Expect = 8.1
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 123 VRNAVNTKETFKQFPRLTRSLLEVYERNNHLGGQDDPQHGKSLKGLDEHWPCEGEFLLNW 182
V+ + T+ K+ + T S E R N LGG+ D SL G+ E E L++
Sbjct: 285 VQTSDTTQSVNKKSEKETSSKAEELRRGNFLGGRRDTLSSGSLTGVSEE---IREQLMDA 341
Query: 183 RGRGYKTLLDVLLNKYPDPNEAIP 206
K L V ++ PD P
Sbjct: 342 AAHTNKAYLAVRRSRDPDTETETP 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,231,269
Number of Sequences: 59808
Number of extensions: 689886
Number of successful extensions: 1342
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1312
Number of HSP's gapped (non-prelim): 33
length of query: 470
length of database: 16,821,457
effective HSP length: 85
effective length of query: 385
effective length of database: 11,737,777
effective search space: 4519044145
effective search space used: 4519044145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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