GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001385-TA|BGIBMGA001385-PA|IPR002937|Amine oxidase
         (470 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   1.1  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    27   1.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 103 NIDEEVCKSHKNNVQSISQFVRNAVNTKETFKQFPRLTRSLLEVYERNNHLGGQDDPQHG 162
           N++ E  K    NVQ   + V++  ++ ETFKQ     R  +E  +    L  Q+   H 
Sbjct: 832 NLEFERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEKDKEKIELMKQEKAAHK 891

Query: 163 KSLKGLDE 170
             +  ++E
Sbjct: 892 TLVDQMEE 899


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 139 LTRSLLEVYERNNHLGGQDDPQHGKSLKGLDEHW 172
           L R     Y+R  ++  Q DP  G  L    E W
Sbjct: 90  LVRDFRHFYDRGGYINRQHDPLSGHMLNSGSERW 123


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,772
Number of Sequences: 2123
Number of extensions: 20554
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 2
length of query: 470
length of database: 516,269
effective HSP length: 66
effective length of query: 404
effective length of database: 376,151
effective search space: 151965004
effective search space used: 151965004
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)