Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001385-TA|BGIBMGA001385-PA|IPR002937|Amine oxidase
(470 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 113 2e-25
Z81512-6|CAB04171.2| 452|Caenorhabditis elegans Hypothetical pr... 109 5e-24
Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical pr... 79 5e-15
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 74 2e-13
Z35602-2|CAA84671.2| 783|Caenorhabditis elegans Hypothetical pr... 64 2e-10
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 60 2e-09
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical pr... 29 7.1
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 29 7.1
U41508-2|AAN39665.2| 552|Caenorhabditis elegans Hypothetical pr... 29 9.3
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 113 bits (273), Expect = 2e-25
Identities = 128/475 (26%), Positives = 212/475 (44%), Gaps = 51/475 (10%)
Query: 17 RKLHDAGLRVLGL-EAADRIGGRICTIEYGDSTLDIGAAWCHGEKDNIVFELAEPLGLLG 75
R+L + G+ + E DRIGGRI I Y D L +GA + +G + N ++++A LGLL
Sbjct: 48 RRLIELGIDDFDIYEGLDRIGGRIHAIPYKDGFLQMGAQFINGAQ-NPLYKIANRLGLLA 106
Query: 76 ---RPDPH--DSWYVLSNGDLAP-------DATCK-----EILANIDEEVCKSHK-NNVQ 117
H ++ + N ++ D T K +A DE+ + + +
Sbjct: 107 DVVSDTAHVDNAHFAFGNQNVQEKDIKTFLDFTSKLDPKYRSIAKHDEKTARRYTFKEIF 166
Query: 118 SIS--QFVRNAVNTKETFKQFPRLTRSLLEVYERNNHLGGQDDPQHGKSLKGLDEHWP-C 174
++ F+++ T + F L RS +E H LK +++ P C
Sbjct: 167 TLDYMHFLKSQNFTDQQTNVFDSLARSFRSYWEFEWAADWSTLSVH--VLKEWNDYGPEC 224
Query: 175 EGEFLLNWRGRGYKTLLDVLLNKYPDPNEAIPVQILLNKHVECIRWGTSQPSHQISPLVQ 234
E F N G+K +LD + P P +A N VE I ++ + ++
Sbjct: 225 E-SFATN--KIGFKAILDDI--AAPIPRKAFN----FNSRVENINLDSN------TGKIK 269
Query: 235 VKCTDGSLYAAKSVIV-TLPLAVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEFT 293
+ +D ++ I+ T L VLK+ H ++F+PPLP+ KI +I + + K++ E+
Sbjct: 270 LTVSDRAVPTEYDYIIVTSSLGVLKKYHHKMFTPPLPRQKIEAIEKIGFGGSCKVFFEWE 329
Query: 294 TPWWPK---SAGKFVILWQEEDKAKFTKEEHWITEIYGLDPVQHQPNVLLAWIYGKGAEA 350
TP+W S + DK ++E I ++ V PNVL AW G+G +
Sbjct: 330 TPFWSNNTYSIAPLPVKGMIRDKLDAFEDETTILQV-----VDWAPNVLSAWYAGRGHQL 384
Query: 351 MEKVSFDDLKAGIDKLLSIFKKKFPVTPVKSVLRSQWASNLLARSAYAYRCVATEENGAS 410
++ +S ++LK I KL+ + ++R+Q N L +Y+Y + S
Sbjct: 385 VDNMSEEELKQRITKLMRDMYNDKSIPEPSKIIRTQLTKNELLLGSYSYMTQVQALSHIS 444
Query: 411 ATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREAQRLM-DSFGKTN 464
+ L+ P+ G P V FAGEAT + G SG REA R + D FG+ N
Sbjct: 445 HSQLAIPV-KLEGRPKVLFAGEATHHRLFQTTIGGYLSGRREADRAVNDWFGRWN 498
>Z81512-6|CAB04171.2| 452|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 452
Score = 109 bits (261), Expect = 5e-24
Identities = 117/446 (26%), Positives = 188/446 (42%), Gaps = 51/446 (11%)
Query: 30 EAADRIGGRICTIEYGDSTLDIGAAWCHGEKDNIVFELAEPLGLLGRPDPH--DSWYV-- 85
E ++RIGGR+ EY D L GA + +G DN V+ L E L + P D W +
Sbjct: 36 EGSNRIGGRVYPFEYQDGYLHFGAEYVNG-VDNEVYNLVEKYDLFDKTKPRTDDLWMLDQ 94
Query: 86 -----LSNGDLAPDATCKEILANIDEEVCKSHKNNVQSISQFVRNAVNTK--ETFKQFP- 137
L NG L P + I ++ +++ V N +N + E + P
Sbjct: 95 DNSITLVNGHLVPKKILDKFNDYIRYLNVALYEKSIKINQLSVENEINNQFIEFLRDVPE 154
Query: 138 ---RLTRSLLEVYERNNHLGGQDDPQHGKSLKGLDEHWPCEGEFLLNWRGRGYKTLLDVL 194
+ SL+ VY +N P +L D+ E +LN +G+ +L
Sbjct: 155 NDHEIYESLINVY-KNYFQTEWSSPLSLSNLSIWDDGTEEEDSAVLN--KQGFYEILKDF 211
Query: 195 LNKYPDPNEAIPVQILLNKHVECIRWGTSQPSHQISPLVQVKCTDGSLYAAKSVIVTLPL 254
+K P N + +++ K E I +V +K +G + + IVT L
Sbjct: 212 RSKIPAGNIRLNCEVINVKEEENI-------------MVTLK--NGEVLHFDACIVTCSL 256
Query: 255 AVLKETHAQLFSPPLPQDKINSINSLHYCVLDKIYIEFTTPWWPKSAGKFVILWQEEDKA 314
LK+ H LF+P L K ++IN + + K+++E++ WW S +IL E++
Sbjct: 257 GYLKKHHKTLFTPQLTSVKQDAINRMGFGNNLKVFLEYSDSWW-NSLNTILILTHGENE- 314
Query: 315 KFTKEEHWITEIYGLDPVQHQPNVLLAWIYGKGAEAM-EKVSFDDLKAGID-KLLSIFKK 372
+ P N+LL WI G G + + +K F +LK +D L K
Sbjct: 315 ----------DFMVFQPSSWAENILLCWIAGSGPKKICDKTDF-ELKILLDTHLHDQLKN 363
Query: 373 KFPVTPVKSVLRSQWASNLLARSAYAYRCVATEENGASATTLSEPIYHGNGLPLVCFAGE 432
V + R W ++ +Y+Y + G L++P+ N P++CFAGE
Sbjct: 364 YLDVKASVKIYRKNWINDEFTLGSYSY-LTPGQIVGEDICILAQPVLKDNN-PVICFAGE 421
Query: 433 ATSYHRHSAVHGAVESGFREAQRLMD 458
T + GAV SG REA R+ +
Sbjct: 422 HTDSTMYQTTVGAVRSGLREASRISE 447
>Z78198-5|CAB01571.1| 437|Caenorhabditis elegans Hypothetical
protein F55C5.6 protein.
Length = 437
Score = 79.4 bits (187), Expect = 5e-15
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 287 KIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITEIYGLDPVQHQPNVLLAWIYGK 346
KI++E+ PWWP G + + + + + T E+ ++ +P N+L+AW+ G
Sbjct: 266 KIFLEYEKPWWP--LGTTLRISGKIEVNQTTLEDDFMV----FEPSSWAKNILVAWVAGN 319
Query: 347 GAEAMEKVSFDDLKAGIDKLLSI-FKKKFPVTPVKSVLRSQWASNLLARSAYAYRCVAT- 404
G + ++S L I K L+ K + + ++ + R W ++ AR +Y+Y T
Sbjct: 320 GPMKIAELSDVQLNEIISKHLTTNLKNIYNIPKIQKIYRHNWITDEFARGSYSYISENTC 379
Query: 405 EENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREAQRLMDSFGKT 463
N L +P+ N P++CFAGE T + GA SG REA R+ + T
Sbjct: 380 HSNTDDIKILRDPVLR-NRKPIICFAGEHTDSKMYQTAVGASRSGLREADRIFNYMRST 437
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 17 RKLHDAGLRVLGLEAADRIGGRICTIEYGDSTLDIGAAWCHGEKDNIVFELAEPLGLL 74
++ + G+ E +DRIGGR+ + Y + L GA + +GE DN ++E+ E LL
Sbjct: 38 QRFEELGIVYTIFEGSDRIGGRVYSFPYQNGYLQFGAEYINGE-DNDIYEIVERKNLL 94
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 74.1 bits (174), Expect = 2e-13
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 232 LVQVKCTDGS--LYAAKSVIVTLPLAVLKET-----HAQLFSPPLPQDKINSINSLHYCV 284
+++++ DGS + A V+ TLP+ VLK+T A +F PPLP+ K +I SL +
Sbjct: 491 ILKLRKPDGSVGILNADYVVSTLPIGVLKKTIIGDERAPVFRPPLPKSKFAAIRSLGNGL 550
Query: 285 LDKIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITEIYGLDPVQHQPNVLLAWIY 344
++KI F T +WP+S +F I+ DK I+E + P +
Sbjct: 551 INKIVFVFETRFWPESINQFAIV---PDK---------ISERAAMFTWSSLPESRTLTTH 598
Query: 345 GKGAEAMEKVSFDDLKAGIDKLLSIFKKKFPVTPVKSVLRSQWASNLLARSAYAYRCVAT 404
G +L ++L K P +P+ + + + W ++ LA + + T
Sbjct: 599 YVGENRFHDTPVTELITKALEMLKTVFKDCP-SPIDAYV-TNWHTDELAFGTGTFMSLRT 656
Query: 405 EENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREAQRLMDS 459
E A L EP+ +G P V FAGE TS H + GA SG R A L ++
Sbjct: 657 EPQHFDA--LKEPLKTRDGKPRVFFAGEHTSALEHGTLDGAFNSGLRAAADLANT 709
>Z35602-2|CAA84671.2| 783|Caenorhabditis elegans Hypothetical
protein R13G10.2 protein.
Length = 783
Score = 64.1 bits (149), Expect = 2e-10
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 20/262 (7%)
Query: 204 AIPVQILLNKHVECIRWGTSQPSHQISPLVQVKCTDGSLYAAKSVIVTLPLAVLKETHAQ 263
A + I LN V+CI WG +I + + + V++T L+VLK H++
Sbjct: 527 ATGLDIRLNCPVKCIDWGRDDRKVKIF----FENAEQAAEEFDKVVITTSLSVLKSNHSK 582
Query: 264 LFSPPLPQDKINSINSLHYCVLDKIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWI 323
+F PPLP +K +I+ L +++KI ++F +W + + + K K + +
Sbjct: 583 MFVPPLPIEKQKAIDDLGAGLIEKIAVKFDRRFW-DTVDADGLRTEYFGKVSDCKTDRSL 641
Query: 324 TEIY----GLDPVQHQPNVLLAWIYGKGAEAMEKVSFDDLKAGIDKLLSIFKKKFPVTPV 379
I+ G DP VL++++ + + ++ ++ DK + +K FP +
Sbjct: 642 FNIFYDFSGKDPNGEDTFVLMSYVTAEHVNLVNVLTESEV---ADKFCATLRKMFPSAVI 698
Query: 380 KSV--LRSQWASNLLARSAYAYRCVATEENGASATTLSEPIYHGNGLPLVCFAGEATSYH 437
+ + S W ++ +Y + + + A+ L + I + FAGE T
Sbjct: 699 NPLGHMMSHWGADRFVGMSYTFVPFGS-DGDATYNQLKKSIDE-----KLYFAGEHTIAA 752
Query: 438 RHSAVHGAVESGFREAQRLMDS 459
+ GA SG REA +++ S
Sbjct: 753 EPQTMAGAYISGLREAGQIVMS 774
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 60.5 bits (140), Expect = 2e-09
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 232 LVQVKCTDGSLYAAKS--VIVTLPLAVLKET-----HAQLFSPPLPQDKINSINSLHYCV 284
L++V+ +G + K+ V+ TLP+ VLK+T A F+P LP K+ +I ++
Sbjct: 457 LLKVQRENGDIEEMKAAFVVSTLPIGVLKKTIIADERAPTFTPSLPDKKVEAIRNIGCGS 516
Query: 285 LDKIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITEIYGLDPVQHQPNVLLAWIY 344
++K +EF +W + G+ + + W + + G VL +I
Sbjct: 517 VNKCILEFDRVFWTANGGRNQFVTVSPNIKTRGSMNIW-SSVPG-------SKVLCTYIV 568
Query: 345 GKGAEAMEKVSFD-DLKAGIDKLLSIFKKKFPVTPVKSVLRSQWASNLLARSAYAYRCVA 403
G+ EAM ++ D ++ + L F P P+ + + ++W + LA + A+ +
Sbjct: 569 GE--EAMLELPDDVIIQNAMINLQKAFGNNCPRAPISAHI-TRWHDDELAFGSGAFMSLR 625
Query: 404 TEENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREA 453
TE S + EP+ +G+ V FAGE T S + GA SG R A
Sbjct: 626 TET--TSFDDVMEPLKTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARAA 673
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 60.5 bits (140), Expect = 2e-09
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 232 LVQVKCTDGSLYAAKS--VIVTLPLAVLKET-----HAQLFSPPLPQDKINSINSLHYCV 284
L++V+ +G + K+ V+ TLP+ VLK+T A F+P LP K+ +I ++
Sbjct: 457 LLKVQRENGDIEEMKAAFVVSTLPIGVLKKTIIADERAPTFTPSLPDKKVEAIRNIGCGS 516
Query: 285 LDKIYIEFTTPWWPKSAGKFVILWQEEDKAKFTKEEHWITEIYGLDPVQHQPNVLLAWIY 344
++K +EF +W + G+ + + W + + G VL +I
Sbjct: 517 VNKCILEFDRVFWTANGGRNQFVTVSPNIKTRGSMNIW-SSVPG-------SKVLCTYIV 568
Query: 345 GKGAEAMEKVSFD-DLKAGIDKLLSIFKKKFPVTPVKSVLRSQWASNLLARSAYAYRCVA 403
G+ EAM ++ D ++ + L F P P+ + + ++W + LA + A+ +
Sbjct: 569 GE--EAMLELPDDVIIQNAMINLQKAFGNNCPRAPISAHI-TRWHDDELAFGSGAFMSLR 625
Query: 404 TEENGASATTLSEPIYHGNGLPLVCFAGEATSYHRHSAVHGAVESGFREA 453
TE S + EP+ +G+ V FAGE T S + GA SG R A
Sbjct: 626 TET--TSFDDVMEPLKTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARAA 673
>Z50070-5|CAA90401.2| 270|Caenorhabditis elegans Hypothetical
protein F43G6.4 protein.
Length = 270
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 121 QFVRNAVNTKETFKQFPRLTRSLLEVYER--NNHLGGQDDPQHGKS----LKGLDEHWPC 174
Q +RN N +++ K+ P+L R L + R N+ G + P K +K H PC
Sbjct: 148 QRIRNNQNKRQSLKRGPQLVRDCLTPFSRQSNDETGSSESPDMKKDDEFYMKCTTCHQPC 207
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 105 DEEVCKSHKNNVQSISQFVRNAVNTKETFKQFP-RLTRSLLEVYERNNHLGGQDDPQHGK 163
++EVCK H+N V ++ + +E P R T + ER N D Q G
Sbjct: 458 EKEVCKKHRNKDDKRVDDVEDSNDLEENASSAPMRSTSECGDERERRNSSSDSSDSQSGI 517
Query: 164 SL 165
S+
Sbjct: 518 SI 519
>U41508-2|AAN39665.2| 552|Caenorhabditis elegans Hypothetical
protein W01C8.4b protein.
Length = 552
Score = 28.7 bits (61), Expect = 9.3
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 350 AMEKVSFDDLKAGIDKLLSIFKKKFPV--TPVKSVLRSQWASNLL---ARSAYAYRCVA 403
A+ K+ + DL+ D L+ I +KK + T +K W++ + A++A A R VA
Sbjct: 69 ALNKIDYSDLEQNSDDLIVIKRKKLKIHGTQLKMFKEQNWSTEHIYKHAKAALAKRRVA 127
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,980,659
Number of Sequences: 27539
Number of extensions: 529245
Number of successful extensions: 1096
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1068
Number of HSP's gapped (non-prelim): 19
length of query: 470
length of database: 12,573,161
effective HSP length: 84
effective length of query: 386
effective length of database: 10,259,885
effective search space: 3960315610
effective search space used: 3960315610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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