Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001384-TA|BGIBMGA001384-PA|IPR002100|Transcription
factor, MADS-box
(164 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U613 Cluster: Serum Response Factor; n=1; Artemia fra... 159 2e-38
UniRef50_Q7Q8W9 Cluster: ENSANGP00000020528; n=5; Endopterygota|... 157 9e-38
UniRef50_UPI00015B444B Cluster: PREDICTED: similar to Serum Resp... 155 3e-37
UniRef50_Q24535 Cluster: Serum response factor homolog; n=3; Dip... 146 2e-34
UniRef50_P11831 Cluster: Serum response factor; n=44; Eumetazoa|... 134 1e-30
UniRef50_Q4TAL4 Cluster: Chromosome undetermined SCAF7287, whole... 133 2e-30
UniRef50_UPI0000585D9A Cluster: PREDICTED: hypothetical protein,... 132 3e-30
UniRef50_Q4S2F3 Cluster: Chromosome 17 SCAF14762, whole genome s... 131 7e-30
UniRef50_UPI00015A6933 Cluster: Serum response factor (SRF).; n=... 130 1e-29
UniRef50_Q4H2R3 Cluster: Transcription factor protein; n=1; Cion... 115 6e-25
UniRef50_O62543 Cluster: Serum response factor; n=1; Geodia cydo... 112 3e-24
UniRef50_Q964I0 Cluster: Serum response factor; n=2; Anthomedusa... 109 3e-23
UniRef50_Q54RY6 Cluster: Putative MADS-box transcription factor;... 97 2e-19
UniRef50_O76853 Cluster: SRF related protein; n=2; Dictyostelium... 96 3e-19
UniRef50_Q18955 Cluster: Putative uncharacterized protein unc-12... 93 3e-18
UniRef50_A6R0Q0 Cluster: Putative uncharacterized protein; n=1; ... 89 6e-17
UniRef50_A2R0I5 Cluster: Contig An12c0290, complete genome; n=14... 88 8e-17
UniRef50_O42725 Cluster: MADS-box homolog Umc1; n=1; Ustilago ma... 84 2e-15
UniRef50_A3LWF0 Cluster: Transcription factor of the MADS box fa... 83 4e-15
UniRef50_Q5K7F1 Cluster: RNA polymerase II transcription factor,... 82 7e-15
UniRef50_Q6CCS9 Cluster: Yarrowia lipolytica chromosome C of str... 80 2e-14
UniRef50_A7TPT7 Cluster: Putative uncharacterized protein; n=1; ... 79 4e-14
UniRef50_P11746 Cluster: Pheromone receptor transcription factor... 79 4e-14
UniRef50_Q6FPY6 Cluster: Candida glabrata strain CBS138 chromoso... 78 1e-13
UniRef50_Q8SUU7 Cluster: MADS domain; n=1; Encephalitozoon cunic... 71 1e-11
UniRef50_P07249 Cluster: Arginine metabolism regulation protein ... 69 4e-11
UniRef50_Q6FU53 Cluster: Candida glabrata strain CBS138 chromoso... 64 1e-09
UniRef50_P78926 Cluster: Pheromone receptor transcription activa... 57 2e-07
UniRef50_A7TPT8 Cluster: Putative uncharacterized protein; n=1; ... 53 3e-06
UniRef50_Q4WB75 Cluster: Ferric-chelate reductase (Fre2), putati... 35 0.78
UniRef50_P29381 Cluster: Agamous-like MADS-box protein AGL1; n=4... 35 0.78
UniRef50_A1WX51 Cluster: Putative uncharacterized protein precur... 34 1.4
UniRef50_Q40767 Cluster: DAL3 protein; n=3; Spermatophyta|Rep: D... 34 1.4
UniRef50_O64645 Cluster: MADS-box protein SOC1; n=16; core eudic... 34 1.8
UniRef50_Q9SZJ6 Cluster: Agamous-like MADS-box protein AGL21; n=... 34 1.8
UniRef50_Q38836 Cluster: Agamous-like MADS-box protein AGL11; n=... 33 2.4
UniRef50_Q1G158 Cluster: MADS-box transcription factor TaAGL12; ... 33 3.2
UniRef50_O24491 Cluster: Putative MADS box transcription factor ... 33 4.2
UniRef50_A0DJU4 Cluster: Chromosome undetermined scaffold_53, wh... 33 4.2
UniRef50_UPI00005843F3 Cluster: PREDICTED: similar to nuclear me... 32 5.5
UniRef50_Q58A80 Cluster: MADS-box transcription factor GbMADS3; ... 32 5.5
UniRef50_O23768 Cluster: Putative MADS domain transcription fact... 32 5.5
UniRef50_Q8L6I8 Cluster: Putative MADS-domain transcription fact... 32 7.3
UniRef50_Q2GN38 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q39I36 Cluster: Radical SAM family protein; n=47; Bacte... 31 9.6
UniRef50_A4AHF4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_Q9XGJ7 Cluster: Putative MADS domain transcription fact... 31 9.6
UniRef50_Q9ST07 Cluster: GpMADS1 protein; n=2; Gnetum|Rep: GpMAD... 31 9.6
UniRef50_Q8LLC6 Cluster: MADS-box gene 4 protein; n=4; Lycopodiu... 31 9.6
UniRef50_Q71UQ7 Cluster: MADS-domain protein DAL10; n=3; Spermat... 31 9.6
UniRef50_Q1ENX5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_Q18998 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
>UniRef50_Q9U613 Cluster: Serum Response Factor; n=1; Artemia
franciscana|Rep: Serum Response Factor - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 317
Score = 159 bits (387), Expect = 2e-38
Identities = 82/110 (74%), Positives = 90/110 (81%), Gaps = 4/110 (3%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTS-E 78
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPDPP S +
Sbjct: 143 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPNGSGD 202
Query: 79 QRMAATGFEETELTYNVVDEDMKVRQLAYAG-TAQYPIEHHPGLAPSPLQ 127
QRM+ATGFEETELTYNV D+D KVRQ+ Y+G HH L PLQ
Sbjct: 203 QRMSATGFEETELTYNVQDDDQKVRQMMYSGHIPPSSTPHH--LLSHPLQ 250
>UniRef50_Q7Q8W9 Cluster: ENSANGP00000020528; n=5;
Endopterygota|Rep: ENSANGP00000020528 - Anopheles
gambiae str. PEST
Length = 167
Score = 157 bits (382), Expect = 9e-38
Identities = 84/116 (72%), Positives = 92/116 (79%), Gaps = 8/116 (6%)
Query: 21 AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTS--E 78
AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPDPPT S +
Sbjct: 9 AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPTGSSGD 68
Query: 79 QRMAATGFEETELTYNVVDEDMKVRQLAYA----GTAQ--YPIEHHPGLAPSPLQQ 128
QRM+ATGFEETEL+YN+ DED KVRQL Y G A +P H GL +QQ
Sbjct: 69 QRMSATGFEETELSYNIGDEDSKVRQLVYGHGHHGHAHLGHPQTGHYGLDQGLMQQ 124
>UniRef50_UPI00015B444B Cluster: PREDICTED: similar to Serum
Response Factor; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Serum Response Factor - Nasonia
vitripennis
Length = 353
Score = 155 bits (377), Expect = 3e-37
Identities = 73/91 (80%), Positives = 83/91 (91%), Gaps = 3/91 (3%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPT---T 76
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPDPPT +
Sbjct: 175 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKALIQTCLNSPDPPTSGSS 234
Query: 77 SEQRMAATGFEETELTYNVVDEDMKVRQLAY 107
+QRM+ATGFEETELTYN+ D++ KVRQ+ Y
Sbjct: 235 GDQRMSATGFEETELTYNIADDEQKVRQMVY 265
>UniRef50_Q24535 Cluster: Serum response factor homolog; n=3;
Diptera|Rep: Serum response factor homolog - Drosophila
melanogaster (Fruit fly)
Length = 449
Score = 146 bits (355), Expect = 2e-34
Identities = 69/84 (82%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTT--S 77
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK+LIQTCLNSPDPP+
Sbjct: 195 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGG 254
Query: 78 EQRMAATGFEETELTYNVVDEDMK 101
+QRM+ATGFEETEL+YN+ DED K
Sbjct: 255 DQRMSATGFEETELSYNIADEDSK 278
>UniRef50_P11831 Cluster: Serum response factor; n=44;
Eumetazoa|Rep: Serum response factor - Homo sapiens
(Human)
Length = 508
Score = 134 bits (323), Expect = 1e-30
Identities = 65/84 (77%), Positives = 74/84 (88%), Gaps = 4/84 (4%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPP----T 75
+AYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPD P
Sbjct: 171 KAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDP 230
Query: 76 TSEQRMAATGFEETELTYNVVDED 99
T++QRM+ATGFEET+LTY V + D
Sbjct: 231 TTDQRMSATGFEETDLTYQVSESD 254
>UniRef50_Q4TAL4 Cluster: Chromosome undetermined SCAF7287, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7287, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 133 bits (321), Expect = 2e-30
Identities = 65/84 (77%), Positives = 74/84 (88%), Gaps = 4/84 (4%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPP----T 75
+AYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPD P
Sbjct: 134 KAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDP 193
Query: 76 TSEQRMAATGFEETELTYNVVDED 99
+S+QRM+ATGFEET+LTY V + D
Sbjct: 194 SSDQRMSATGFEETDLTYQVSEAD 217
>UniRef50_UPI0000585D9A Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 410
Score = 132 bits (320), Expect = 3e-30
Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 7/87 (8%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTS-- 77
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+SGK LIQTCLNSPD P+ S
Sbjct: 108 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSESGKALIQTCLNSPDIPSDSQH 167
Query: 78 -----EQRMAATGFEETELTYNVVDED 99
+QRM ATGFEET+L+Y V DE+
Sbjct: 168 HSRNPDQRMCATGFEETDLSYQVSDEE 194
>UniRef50_Q4S2F3 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 443
Score = 131 bits (317), Expect = 7e-30
Identities = 65/84 (77%), Positives = 74/84 (88%), Gaps = 4/84 (4%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD-PPTTS- 77
+AYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPD PP T
Sbjct: 148 KAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRTDP 207
Query: 78 --EQRMAATGFEETELTYNVVDED 99
+QRM+ATGFEET+LTY V + +
Sbjct: 208 SMDQRMSATGFEETDLTYQVSESE 231
>UniRef50_UPI00015A6933 Cluster: Serum response factor (SRF).; n=1;
Danio rerio|Rep: Serum response factor (SRF). - Danio
rerio
Length = 482
Score = 130 bits (315), Expect = 1e-29
Identities = 64/83 (77%), Positives = 75/83 (90%), Gaps = 3/83 (3%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD-PPTT-- 76
+AYELSTLTGTQV+LLVASETGHVYTFATRKLQPMITS++GK LIQTCLNSPD PP +
Sbjct: 134 KAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDC 193
Query: 77 SEQRMAATGFEETELTYNVVDED 99
S+QRM+A+G+EETELTY V + +
Sbjct: 194 SDQRMSASGYEETELTYQVSESE 216
>UniRef50_Q4H2R3 Cluster: Transcription factor protein; n=1; Ciona
intestinalis|Rep: Transcription factor protein - Ciona
intestinalis (Transparent sea squirt)
Length = 335
Score = 115 bits (276), Expect = 6e-25
Identities = 60/93 (64%), Positives = 75/93 (80%), Gaps = 8/93 (8%)
Query: 14 RISGV-GEAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD 72
R SG+ +A+EL+TLTGTQVMLLVASETGHVYTFATRKLQP+++S++GK+LIQTCLNSPD
Sbjct: 85 RKSGIMKKAHELATLTGTQVMLLVASETGHVYTFATRKLQPILSSEAGKQLIQTCLNSPD 144
Query: 73 PPTTS-------EQRMAATGFEETELTYNVVDE 98
T+ +QRM+A GFEE EL+Y D+
Sbjct: 145 TNETNVQSSQQDDQRMSAQGFEEPELSYAPPDD 177
>UniRef50_O62543 Cluster: Serum response factor; n=1; Geodia
cydonium|Rep: Serum response factor - Geodia cydonium
(Sponge)
Length = 383
Score = 112 bits (270), Expect = 3e-24
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 8/88 (9%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTS-- 77
+AYELSTLTGTQVMLLVASETGHVYTFAT KLQPMITS++GK LIQTCL+ PDP
Sbjct: 90 KAYELSTLTGTQVMLLVASETGHVYTFATPKLQPMITSEAGKALIQTCLHQPDPAPMGQG 149
Query: 78 ------EQRMAATGFEETELTYNVVDED 99
+ RM++TG+EET+L Y+ + E+
Sbjct: 150 PHQGDFDVRMSSTGYEETDLGYSGLTEE 177
>UniRef50_Q964I0 Cluster: Serum response factor; n=2;
Anthomedusae|Rep: Serum response factor - Hydra
attenuata (Hydra) (Hydra vulgaris)
Length = 417
Score = 109 bits (262), Expect = 3e-23
Identities = 53/59 (89%), Positives = 56/59 (94%), Gaps = 1/59 (1%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDP-PTTS 77
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS+SGK LIQTCLNSPDP P T+
Sbjct: 130 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSESGKALIQTCLNSPDPTPVTA 188
>UniRef50_Q54RY6 Cluster: Putative MADS-box transcription factor;
n=1; Dictyostelium discoideum AX4|Rep: Putative MADS-box
transcription factor - Dictyostelium discoideum AX4
Length = 467
Score = 97.1 bits (231), Expect = 2e-19
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 14 RISGV-GEAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD 72
R SG+ +AYELSTLTGTQV+L+VASETGHVYTFAT KLQP+IT GK LIQ CLN+PD
Sbjct: 59 RKSGIMKKAYELSTLTGTQVLLIVASETGHVYTFATPKLQPLITKQEGKTLIQACLNTPD 118
Query: 73 PPTTSE 78
P S+
Sbjct: 119 VPPVSK 124
>UniRef50_O76853 Cluster: SRF related protein; n=2; Dictyostelium
discoideum|Rep: SRF related protein - Dictyostelium
discoideum (Slime mold)
Length = 420
Score = 96.3 bits (229), Expect = 3e-19
Identities = 44/57 (77%), Positives = 50/57 (87%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTT 76
+AYELSTLTGTQV+LLVASETGHVYTFAT KLQP+IT GK LIQ+CLN+PD P +
Sbjct: 97 KAYELSTLTGTQVLLLVASETGHVYTFATAKLQPLITRPEGKNLIQSCLNTPDNPNS 153
>UniRef50_Q18955 Cluster: Putative uncharacterized protein unc-120;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein unc-120 - Caenorhabditis elegans
Length = 327
Score = 93.1 bits (221), Expect = 3e-18
Identities = 42/52 (80%), Positives = 50/52 (96%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSP 71
+A+ELSTLTGTQVMLLVASETGHVYT+AT KLQPMI+SD+GK +IQ+CLN+P
Sbjct: 75 KAFELSTLTGTQVMLLVASETGHVYTYATPKLQPMISSDTGKAMIQSCLNAP 126
>UniRef50_A6R0Q0 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 239
Score = 88.6 bits (210), Expect = 6e-17
Identities = 52/109 (47%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+AYELS LTGTQV+LLV SETG VYTF T KLQP++T GK LIQ CLN+P+ PT SE
Sbjct: 100 KAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKSEGKNLIQACLNAPE-PTASE- 157
Query: 80 RMAATGFEETELTYNVVDEDMKVRQLAYAGTAQYPIEHHPGLAPSPLQQ 128
G E E+ D+ P HPG S QQ
Sbjct: 158 ----NGVEVPEVPPEAQDDVSHANVAGQQPNIPRPGGIHPGYMSSEHQQ 202
>UniRef50_A2R0I5 Cluster: Contig An12c0290, complete genome; n=14;
Pezizomycotina|Rep: Contig An12c0290, complete genome -
Aspergillus niger
Length = 232
Score = 88.2 bits (209), Expect = 8e-17
Identities = 43/64 (67%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+AYELS LTGTQV+LLV SETG VYTF T KLQP++T GK LIQ CLN+PD PTT+E
Sbjct: 82 KAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKAEGKNLIQACLNAPD-PTTNEN 140
Query: 80 RMAA 83
+ A
Sbjct: 141 GVDA 144
>UniRef50_O42725 Cluster: MADS-box homolog Umc1; n=1; Ustilago
maydis|Rep: MADS-box homolog Umc1 - Ustilago maydis
(Smut fungus)
Length = 454
Score = 83.8 bits (198), Expect = 2e-15
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPP 74
+AYEL+TLTGTQV+LLV S+TG VYTF T KLQ ++T G+ LIQ CLN+PDPP
Sbjct: 128 KAYELATLTGTQVLLLVVSQTGLVYTFTTPKLQALVTQAEGRNLIQACLNAPDPP 182
>UniRef50_A3LWF0 Cluster: Transcription factor of the MADS box
family; n=8; Ascomycota|Rep: Transcription factor of the
MADS box family - Pichia stipitis (Yeast)
Length = 243
Score = 82.6 bits (195), Expect = 4e-15
Identities = 38/60 (63%), Positives = 45/60 (75%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+AYELS LTGTQV+LLV SETG VYTF T KLQP++T GK LIQ CLN+P+ +Q
Sbjct: 80 KAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKSEGKNLIQACLNAPEEGLGDDQ 139
>UniRef50_Q5K7F1 Cluster: RNA polymerase II transcription factor,
putative; n=2; Filobasidiella neoformans|Rep: RNA
polymerase II transcription factor, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 919
Score = 81.8 bits (193), Expect = 7e-15
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD 72
+AYELS LTGTQV+LLV SETG VYTF T KLQP++ GK LIQ CLN+PD
Sbjct: 300 KAYELSILTGTQVLLLVVSETGLVYTFTTNKLQPLVQKSEGKNLIQACLNAPD 352
>UniRef50_Q6CCS9 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 251
Score = 80.2 bits (189), Expect = 2e-14
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD 72
+AYELS LTGTQV+LLV SETG VYTF T KLQP++T GK LIQ CLN+ D
Sbjct: 77 KAYELSVLTGTQVLLLVVSETGLVYTFTTPKLQPLVTKPEGKNLIQACLNASD 129
>UniRef50_A7TPT7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 259
Score = 79.4 bits (187), Expect = 4e-14
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+A+ELS LTGTQV+LLV SETG VYTF+T K +P++T G+ LIQ CLN+PD E+
Sbjct: 52 KAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAPDEEEEEEE 111
>UniRef50_P11746 Cluster: Pheromone receptor transcription factor;
n=4; Saccharomycetales|Rep: Pheromone receptor
transcription factor - Saccharomyces cerevisiae (Baker's
yeast)
Length = 286
Score = 79.4 bits (187), Expect = 4e-14
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+A+ELS LTGTQV+LLV SETG VYTF+T K +P++T G+ LIQ CLN+PD E+
Sbjct: 46 KAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAPDDEEEDEE 105
>UniRef50_Q6FPY6 Cluster: Candida glabrata strain CBS138 chromosome
I complete sequence; n=2; Saccharomycetales|Rep: Candida
glabrata strain CBS138 chromosome I complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 252
Score = 77.8 bits (183), Expect = 1e-13
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD 72
+A+ELS LTGTQV+LL+ SETG VYTF+T K +P++T G+ LIQ CLN+PD
Sbjct: 88 KAFELSVLTGTQVLLLIVSETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAPD 140
>UniRef50_Q8SUU7 Cluster: MADS domain; n=1; Encephalitozoon
cuniculi|Rep: MADS domain - Encephalitozoon cuniculi
Length = 211
Score = 71.3 bits (167), Expect = 1e-11
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+AYEL+ LTGT+++LLVASE+GHV+TFAT KL+P+I + +IQ CLN P+
Sbjct: 125 KAYELNILTGTEILLLVASESGHVFTFATEKLKPIIAEH--EDIIQNCLNRPEGTPYKPN 182
Query: 80 RMAATGFEETE 90
+ +G + TE
Sbjct: 183 LLKESGKQSTE 193
>UniRef50_P07249 Cluster: Arginine metabolism regulation protein I;
n=2; Saccharomyces cerevisiae|Rep: Arginine metabolism
regulation protein I - Saccharomyces cerevisiae (Baker's
yeast)
Length = 177
Score = 69.3 bits (162), Expect = 4e-11
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSE 78
+AYELS LTG ++LL+ + +G VYTF T KL+P++ D GK LI+ C+N+ D P ++
Sbjct: 108 KAYELSVLTGANILLLILANSGLVYTFTTPKLEPVVREDEGKSLIRACINASDTPDATD 166
>UniRef50_Q6FU53 Cluster: Candida glabrata strain CBS138 chromosome
F complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome F complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 198
Score = 64.1 bits (149), Expect = 1e-09
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLN 69
+AYEL+ +TG V+LL+ S G VYTFAT LQP+I D GK LI+ CLN
Sbjct: 144 KAYELAVMTGANVLLLILSPKGLVYTFATPSLQPLIRDDPGKELIRRCLN 193
>UniRef50_P78926 Cluster: Pheromone receptor transcription
activator; n=1; Schizosaccharomyces pombe|Rep: Pheromone
receptor transcription activator - Schizosaccharomyces
pombe (Fission yeast)
Length = 398
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/89 (33%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLI-QTCLNS---PDPPT 75
+A EL+ LTG++VM+LV SETG V+TF+T KL+ ++ S G++LI ++ +N+ +
Sbjct: 48 KANELALLTGSEVMVLVVSETGLVHTFSTPKLENVVKSPEGQKLITESLINATTDQNESQ 107
Query: 76 TSEQRMAATGFEETELTYNVVDEDMKVRQ 104
S+ + ++ ++E Y + E+M++ +
Sbjct: 108 ASQAKQSSAQLSDSESGYPLDHEEMRISE 136
>UniRef50_A7TPT8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 115
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 14 RISGVGEAYELSTLTGTQVMLLVAS-ETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPD 72
RI + + YELS +TG ++LLVAS ++ VYTF+T KL+ I + GK L++ CL D
Sbjct: 55 RIGLMKKCYELSVMTGVNMLLLVASTDSKLVYTFSTPKLRRFIEENEGKSLVRNCLKKED 114
>UniRef50_Q4WB75 Cluster: Ferric-chelate reductase (Fre2), putative;
n=3; Trichocomaceae|Rep: Ferric-chelate reductase
(Fre2), putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 710
Score = 35.1 bits (77), Expect = 0.78
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 64 IQTCLNSPDPPTTSEQRMAATGFEETELTYNVVDEDMKVRQLAYAGTAQYPIEHHPGLAP 123
+ CL+S PP+TS Q + ATG + LT+ V RQL +Q P+ P
Sbjct: 523 VTRCLDSDKPPSTSSQDL-ATGPYQPCLTFFVRTLSGTTRQL--CARSQLPVLVEGSYPP 579
Query: 124 SPLQQYH 130
SPL +H
Sbjct: 580 SPLISHH 586
>UniRef50_P29381 Cluster: Agamous-like MADS-box protein AGL1; n=45;
core eudicotyledons|Rep: Agamous-like MADS-box protein
AGL1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 248
Score = 35.1 bits (77), Expect = 0.78
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+AYELS L +V L++ S G +Y +A ++ I +R + C ++ +PP+ +E
Sbjct: 46 KAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTI-----ERYKKACSDAVNPPSVTEA 100
Query: 80 RMAATGFEETELTYNVVD 97
E ++L + D
Sbjct: 101 NTQYYQQEASKLRRQIRD 118
>UniRef50_A1WX51 Cluster: Putative uncharacterized protein
precursor; n=1; Halorhodospira halophila SL1|Rep:
Putative uncharacterized protein precursor -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 268
Score = 34.3 bits (75), Expect = 1.4
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 69 NSPDPPTTSEQRM--AATGFEETELTYNVVDEDMKVRQLAYAGTAQYPIEHHPG 120
N+ DP T Q M A G TE+T+ VVDE+ ++ ++ + + + HPG
Sbjct: 159 NALDPLTHRWQVMQEALEGTRHTEITHQVVDEEGEISEVVFRVEGRQTVRAHPG 212
>UniRef50_Q40767 Cluster: DAL3 protein; n=3; Spermatophyta|Rep:
DAL3 protein - Picea abies (Norway spruce) (Picea
excelsa)
Length = 203
Score = 34.3 bits (75), Expect = 1.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
+AYELS L +V L+V S G +Y FA +Q M+
Sbjct: 46 KAYELSVLCDAEVALIVFSPRGKLYEFANPSMQKML 81
>UniRef50_O64645 Cluster: MADS-box protein SOC1; n=16; core
eudicotyledons|Rep: MADS-box protein SOC1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 214
Score = 33.9 bits (74), Expect = 1.8
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+A+ELS L +V L++ S G +Y FA+ +Q D+ R ++ + SE+
Sbjct: 31 KAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQ-----DTIDRYLRHTKDRVSTKPVSEE 85
Query: 80 RMAATGFEETELTYNVVDEDMKVRQLAYAGTAQYPIE 116
M +E + + + R+L G IE
Sbjct: 86 NMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIE 122
>UniRef50_Q9SZJ6 Cluster: Agamous-like MADS-box protein AGL21;
n=8; Magnoliophyta|Rep: Agamous-like MADS-box protein
AGL21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 228
Score = 33.9 bits (74), Expect = 1.8
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 18 VGEAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTS 77
+ +A EL+ L +V L++ S TG +Y FA+ ++ +I + ++ Q L +P
Sbjct: 29 IKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEVKF 88
Query: 78 EQRMAA 83
QR AA
Sbjct: 89 WQREAA 94
>UniRef50_Q38836 Cluster: Agamous-like MADS-box protein AGL11; n=25;
Magnoliophyta|Rep: Agamous-like MADS-box protein AGL11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 230
Score = 33.5 bits (73), Expect = 2.4
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQ 79
+AYELS L +V L+V S G +Y +A ++ I +R + C +S + T E
Sbjct: 31 KAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTI-----ERYKKACSDSTNTSTVQEI 85
Query: 80 RMAATGFEETELTYNV 95
A E +L +
Sbjct: 86 NAAYYQQESAKLRQQI 101
>UniRef50_Q1G158 Cluster: MADS-box transcription factor TaAGL12;
n=5; BEP clade|Rep: MADS-box transcription factor
TaAGL12 - Triticum aestivum (Wheat)
Length = 176
Score = 33.1 bits (72), Expect = 3.2
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFAT 48
+AYELS L QV LLV S G +Y FA+
Sbjct: 31 KAYELSVLCDAQVALLVFSPAGRLYEFAS 59
>UniRef50_O24491 Cluster: Putative MADS box transcription factor
PrMADS7; n=1; Pinus radiata|Rep: Putative MADS box
transcription factor PrMADS7 - Pinus radiata (Monterey
pine)
Length = 163
Score = 32.7 bits (71), Expect = 4.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
+AYELS L +V L+V S G Y FA +Q M+
Sbjct: 48 KAYELSVLCDAEVALIVFSPRGKRYEFANPSMQKML 83
>UniRef50_A0DJU4 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_53,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 461
Score = 32.7 bits (71), Expect = 4.2
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 29 GTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQRMAATGFEE 88
G Q M LV SET + T QP+I K LIQT + P Q++ +
Sbjct: 19 GPQSMRLVTSETKQIIT-----QQPVIEISQQKTLIQT---QNEAPLKQIQQLPPPRIQ- 69
Query: 89 TELTYNVVDEDMKVRQLAYAGTAQYPIEHHPGLAP 123
+ NV+ ++M++ Q++Y GT Y ++ + AP
Sbjct: 70 ---SQNVLRQNMQIPQVSYPGT--YSVQQNCQQAP 99
>UniRef50_UPI00005843F3 Cluster: PREDICTED: similar to nuclear
membrane protein XMAN1; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to nuclear membrane
protein XMAN1 - Strongylocentrotus purpuratus
Length = 444
Score = 32.3 bits (70), Expect = 5.5
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 66 TCLNSP-DPPTTSEQRMAATGFEETELTYNVVDEDMKVRQLAYAGTAQYPIEHHPGLAPS 124
T SP + TS R ++T + T LTY V+ RQ A A A PI P L S
Sbjct: 193 TFFTSPFNSSRTSTPRKSSTSRDNTTLTYYSVNPGNSSRQDARASAAATPISGRPSLRGS 252
Query: 125 PL 126
L
Sbjct: 253 AL 254
>UniRef50_Q58A80 Cluster: MADS-box transcription factor GbMADS3;
n=5; Spermatophyta|Rep: MADS-box transcription factor
GbMADS3 - Ginkgo biloba (Ginkgo)
Length = 218
Score = 32.3 bits (70), Expect = 5.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
+AYE S L +V L++ S G +Y FA+ +Q M+
Sbjct: 31 KAYEFSVLCDAEVGLIIFSPRGKLYEFASASMQKML 66
>UniRef50_O23768 Cluster: Putative MADS domain transcription
factor; n=1; Ceratopteris pteridoides|Rep: Putative
MADS domain transcription factor - Ceratopteris
pteridoides
Length = 193
Score = 32.3 bits (70), Expect = 5.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
+AYELS L +V ++V S TG + FAT + M+
Sbjct: 7 KAYELSVLCDAEVAVIVFSSTGRLSEFATPSMPKML 42
>UniRef50_Q8L6I8 Cluster: Putative MADS-domain transcription
factor; n=1; Ophioglossum pedunculosum|Rep: Putative
MADS-domain transcription factor - Ophioglossum
pedunculosum
Length = 217
Score = 31.9 bits (69), Expect = 7.3
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
+AYELS L +V L++ S TG ++ FA+ ++ ++
Sbjct: 7 KAYELSVLCDAEVALIIFSGTGKLFEFASSSMKKIL 42
>UniRef50_Q2GN38 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1105
Score = 31.9 bits (69), Expect = 7.3
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 107 YAGTAQYPIEHHPGLAPSPLQQYHQHXXXXXXXXXXXXGQP 147
Y+ + QYP EH PG P P H G P
Sbjct: 68 YSASRQYPPEHGPGPMPGPTHSRHHSTSSITSGPTMTRGMP 108
>UniRef50_Q39I36 Cluster: Radical SAM family protein; n=47;
Bacteria|Rep: Radical SAM family protein - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 480
Score = 31.5 bits (68), Expect = 9.6
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 64 IQTCLNSPDPPTTSEQRMAATGFEETELTYNVVD-EDMKVRQLAYAGTAQYPIEHH 118
IQ L +P P TT ++ G+ E T N+V E +++ + YA ++ I HH
Sbjct: 377 IQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRDEIYHH 432
>UniRef50_A4AHF4 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 414
Score = 31.5 bits (68), Expect = 9.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 PKPMRIEVYIRISGVGEAYELSTLTGTQVMLLVAS--ETGHVYTFATRKLQPMITSDSGK 61
P+P V+ + G G A L+ + G ++ ++AS G Y F T +Q + ++GK
Sbjct: 109 PEPRLAVVFAFLWGAGVAVLLALIVGAEIDNVIASLGGPGPAYEFFTAAVQAPVVEEAGK 168
Query: 62 RL 63
L
Sbjct: 169 AL 170
>UniRef50_Q9XGJ7 Cluster: Putative MADS domain transcription
factor GGM10; n=1; Gnetum gnemon|Rep: Putative MADS
domain transcription factor GGM10 - Gnetum gnemon
(Bago)
Length = 216
Score = 31.5 bits (68), Expect = 9.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKR 62
+AYELS L +V L++ S G +Y AT M T + +R
Sbjct: 31 KAYELSVLCDAEVALIIFSSRGKLYELATSNKSMMSTLERYQR 73
>UniRef50_Q9ST07 Cluster: GpMADS1 protein; n=2; Gnetum|Rep:
GpMADS1 protein - Gnetum parvifolium
Length = 218
Score = 31.5 bits (68), Expect = 9.6
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMIT 56
+A+ELS L + LLV SE+G ++ F+ ++ +IT
Sbjct: 31 KAFELSVLCDADIALLVFSESGKLHQFSNPEMNMIIT 67
>UniRef50_Q8LLC6 Cluster: MADS-box gene 4 protein; n=4; Lycopodium
annotinum|Rep: MADS-box gene 4 protein - Lycopodium
annotinum (Stiff clubmoss)
Length = 237
Score = 31.5 bits (68), Expect = 9.6
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
+A+ELS L QV +++ S TG ++ FA+ +++ ++
Sbjct: 31 KAHELSVLCDAQVAVIIFSSTGKLFQFASTRMKEIL 66
>UniRef50_Q71UQ7 Cluster: MADS-domain protein DAL10; n=3;
Spermatophyta|Rep: MADS-domain protein DAL10 - Picea
abies (Norway spruce) (Picea excelsa)
Length = 270
Score = 31.5 bits (68), Expect = 9.6
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 14 RISGVGEAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI 55
R+ + +A ELS L +V +++ S TG +Y F++ ++ MI
Sbjct: 25 RMGLLKKAQELSVLCDAEVGVIIFSNTGRLYDFSSSSMEKMI 66
>UniRef50_Q1ENX5 Cluster: Putative uncharacterized protein; n=1;
Musa acuminata|Rep: Putative uncharacterized protein -
Musa acuminata (Banana)
Length = 786
Score = 31.5 bits (68), Expect = 9.6
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 47 ATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQRM--AATGFEETELTYNVVDEDMKVRQ 104
+ R LQP + S R L S +PP+TS + A G + T+L++NV +
Sbjct: 469 SARDLQPPVPSGYPPRSFD--LQSDNPPSTSNSSLPNAQPGLD-TKLSWNVASGNRLHTD 525
Query: 105 LAYAGTAQYPIEHHPGLAP 123
+ GT+ P+ P L P
Sbjct: 526 IFAPGTSARPVPPLPPLPP 544
>UniRef50_Q18998 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 268
Score = 31.5 bits (68), Expect = 9.6
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 34 LLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQRMAATGFEETELTY 93
L V ET ++T ++ +P ++ +N P P+TSE A T E+ +L
Sbjct: 98 LCVIYETVSIHTDLEKQRKPASSNSLPSDFPDISMNEPQQPSTSENATAVTSEEQPQLID 157
Query: 94 NVVDEDMKVRQL 105
+D + V L
Sbjct: 158 PFIDFECHVCHL 169
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.131 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,249,551
Number of Sequences: 1657284
Number of extensions: 5686906
Number of successful extensions: 14149
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 14089
Number of HSP's gapped (non-prelim): 54
length of query: 164
length of database: 575,637,011
effective HSP length: 95
effective length of query: 69
effective length of database: 418,195,031
effective search space: 28855457139
effective search space used: 28855457139
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 68 (31.5 bits)
- SilkBase 1999-2023 -