Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001384-TA|BGIBMGA001384-PA|IPR002100|Transcription
factor, MADS-box
(164 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77532-1|CAA54670.1| 450|Drosophila melanogaster serum response... 146 1e-35
AY095071-1|AAM11399.1| 449|Drosophila melanogaster RE17834p pro... 146 1e-35
AE013599-3853|AAF47195.1| 449|Drosophila melanogaster CG3411-PA... 146 1e-35
AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA... 30 1.3
X83527-1|CAA58508.1| 516|Drosophila melanogaster myocyte enhanc... 30 1.8
U07422-1|AAA20463.1| 515|Drosophila melanogaster myocyte-specif... 30 1.8
U03292-1|AAA19957.1| 515|Drosophila melanogaster mef2 protein. 30 1.8
AY118311-1|AAM48340.1| 473|Drosophila melanogaster GH24154p pro... 30 1.8
AY061589-1|AAL29137.1| 193|Drosophila melanogaster SD04091p pro... 30 1.8
AY061096-1|AAL28644.1| 487|Drosophila melanogaster LD08608p pro... 30 1.8
AE013599-1761|AAF58340.2| 1093|Drosophila melanogaster CG6280-PA... 30 1.8
AE013599-975|AAM71045.1| 193|Drosophila melanogaster CG1429-PE,... 30 1.8
AE013599-974|AAM71044.1| 540|Drosophila melanogaster CG1429-PD,... 30 1.8
AE013599-973|AAM71043.1| 515|Drosophila melanogaster CG1429-PC,... 30 1.8
AE013599-972|AAF58872.1| 516|Drosophila melanogaster CG1429-PA,... 30 1.8
AE013599-971|AAM71042.1| 509|Drosophila melanogaster CG1429-PB,... 30 1.8
AE013599-970|AAS64881.1| 501|Drosophila melanogaster CG1429-PF,... 30 1.8
AY060471-1|AAL25510.1| 323|Drosophila melanogaster SD05789p pro... 29 3.1
AE014296-638|AAN11559.1| 323|Drosophila melanogaster CG12016-PB... 29 3.1
AE014296-637|AAF47759.2| 323|Drosophila melanogaster CG12016-PA... 29 3.1
AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p pro... 28 7.1
AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,... 28 7.1
AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,... 28 7.1
AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,... 28 7.1
U20542-1|AAA63150.1| 1133|Drosophila melanogaster lethal(1)1Bi p... 27 9.4
BT021267-1|AAX33415.1| 1133|Drosophila melanogaster RE47565p pro... 27 9.4
AL031581-6|CAA20885.1| 1133|Drosophila melanogaster EG:115C2.2,F... 27 9.4
AE014298-78|AAF45532.1| 1133|Drosophila melanogaster CG6189-PA p... 27 9.4
>X77532-1|CAA54670.1| 450|Drosophila melanogaster serum response
factor homolog protein.
Length = 450
Score = 146 bits (355), Expect = 1e-35
Identities = 69/84 (82%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTT--S 77
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK+LIQTCLNSPDPP+
Sbjct: 195 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGG 254
Query: 78 EQRMAATGFEETELTYNVVDEDMK 101
+QRM+ATGFEETEL+YN+ DED K
Sbjct: 255 DQRMSATGFEETELSYNIADEDSK 278
>AY095071-1|AAM11399.1| 449|Drosophila melanogaster RE17834p
protein.
Length = 449
Score = 146 bits (355), Expect = 1e-35
Identities = 69/84 (82%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTT--S 77
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK+LIQTCLNSPDPP+
Sbjct: 195 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGG 254
Query: 78 EQRMAATGFEETELTYNVVDEDMK 101
+QRM+ATGFEETEL+YN+ DED K
Sbjct: 255 DQRMSATGFEETELSYNIADEDSK 278
>AE013599-3853|AAF47195.1| 449|Drosophila melanogaster CG3411-PA
protein.
Length = 449
Score = 146 bits (355), Expect = 1e-35
Identities = 69/84 (82%), Positives = 78/84 (92%), Gaps = 2/84 (2%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTT--S 77
+AYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITS++GK+LIQTCLNSPDPP+
Sbjct: 195 KAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMITSEAGKQLIQTCLNSPDPPSVGGG 254
Query: 78 EQRMAATGFEETELTYNVVDEDMK 101
+QRM+ATGFEETEL+YN+ DED K
Sbjct: 255 DQRMSATGFEETELSYNIADEDSK 278
>AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA,
isoform A protein.
Length = 4390
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 41 GHVYTFATRKLQPMITSDSGKRLIQTCLNSPDPPTTSEQRMAATGFEETELTYNVVDEDM 100
GHVY +T D +RLI + LN P T E+ A TY V
Sbjct: 3983 GHVYLTGECNYGGRVTDDKDRRLILSLLNMIYNPNTIEEDNYAL---SQSGTYRVPLSPT 4039
Query: 101 KVRQLAYAGTAQYPIEHHP 119
++ + Y + +P+ HP
Sbjct: 4040 RLNSIEY--VSSFPLSPHP 4056
>X83527-1|CAA58508.1| 516|Drosophila melanogaster myocyte
enhancer-binding factor 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>U07422-1|AAA20463.1| 515|Drosophila melanogaster myocyte-specific
enhancer factor 2 protein.
Length = 515
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>U03292-1|AAA19957.1| 515|Drosophila melanogaster mef2 protein.
Length = 515
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AY118311-1|AAM48340.1| 473|Drosophila melanogaster GH24154p
protein.
Length = 473
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 3 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 62
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 63 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 107
>AY061589-1|AAL29137.1| 193|Drosophila melanogaster SD04091p
protein.
Length = 193
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AY061096-1|AAL28644.1| 487|Drosophila melanogaster LD08608p
protein.
Length = 487
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 3 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 62
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 63 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 107
>AE013599-1761|AAF58340.2| 1093|Drosophila melanogaster CG6280-PA
protein.
Length = 1093
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 53 PMITSDSGKRLIQTCLNSPDPP-TTSEQRMAATGFEE-TELTYNVVDEDMKVRQLAYAGT 110
P S + L+ LN+P PP +++ +A T FE ++T N V + A+A
Sbjct: 542 PTPVSATPNSLVFVTLNTPSPPHSSAAPSIAHTPFEPGVQITVNHPAPHNYVAE-AHAEP 600
Query: 111 AQYPIEHHPGLAPSPLQQY 129
+Q I+H P AP Y
Sbjct: 601 SQTIIQHAPAPAPKKSTPY 619
>AE013599-975|AAM71045.1| 193|Drosophila melanogaster CG1429-PE,
isoform E protein.
Length = 193
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AE013599-974|AAM71044.1| 540|Drosophila melanogaster CG1429-PD,
isoform D protein.
Length = 540
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AE013599-973|AAM71043.1| 515|Drosophila melanogaster CG1429-PC,
isoform C protein.
Length = 515
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AE013599-972|AAF58872.1| 516|Drosophila melanogaster CG1429-PA,
isoform A protein.
Length = 516
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AE013599-971|AAM71042.1| 509|Drosophila melanogaster CG1429-PB,
isoform B protein.
Length = 509
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AE013599-970|AAS64881.1| 501|Drosophila melanogaster CG1429-PF,
isoform F protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 20 EAYELSTLTGTQVMLLVASETGHVYTFATRKLQPMI----------TSDSGKRLIQ-TCL 68
+AYELS L ++ L++ S + +Y +A+ + ++ S + K +I+
Sbjct: 31 KAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENK 90
Query: 69 NSPDPPTTSEQRMAATGFEETELTYNVVDED----MKVRQLAYAG 109
N P + E T TE YN +DE+ M+ Q+A G
Sbjct: 91 NGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGG 135
>AY060471-1|AAL25510.1| 323|Drosophila melanogaster SD05789p
protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 106 AYAGTAQYPIEHHPGLAPSPLQQYHQH 132
A G QYP + HP P Q +HQH
Sbjct: 133 ANGGVYQYPPQQHPRHHPHHQQHHHQH 159
>AE014296-638|AAN11559.1| 323|Drosophila melanogaster CG12016-PB,
isoform B protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 106 AYAGTAQYPIEHHPGLAPSPLQQYHQH 132
A G QYP + HP P Q +HQH
Sbjct: 133 ANGGVYQYPPQQHPRHHPHHQQHHHQH 159
>AE014296-637|AAF47759.2| 323|Drosophila melanogaster CG12016-PA,
isoform A protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 106 AYAGTAQYPIEHHPGLAPSPLQQYHQH 132
A G QYP + HP P Q +HQH
Sbjct: 133 ANGGVYQYPPQQHPRHHPHHQQHHHQH 159
>AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p
protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 110 TAQYPIEHHPGLAPSPLQQYHQ 131
T +P PGLA PLQQ HQ
Sbjct: 526 TQPFPAAPPPGLAAPPLQQQHQ 547
>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
isoform C protein.
Length = 1173
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 110 TAQYPIEHHPGLAPSPLQQYHQ 131
T +P PGLA PLQQ HQ
Sbjct: 831 TQPFPAAPPPGLAAPPLQQQHQ 852
>AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,
isoform B protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 110 TAQYPIEHHPGLAPSPLQQYHQ 131
T +P PGLA PLQQ HQ
Sbjct: 526 TQPFPAAPPPGLAAPPLQQQHQ 547
>AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,
isoform A protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 110 TAQYPIEHHPGLAPSPLQQYHQ 131
T +P PGLA PLQQ HQ
Sbjct: 526 TQPFPAAPPPGLAAPPLQQQHQ 547
>U20542-1|AAA63150.1| 1133|Drosophila melanogaster lethal(1)1Bi
protein protein.
Length = 1133
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 61 KRLIQTCLNSPDPPTTSEQRMAATGFEETELTYNVVDEDMKVRQLA 106
K++I + + T +EQR A TG+ L + +DMK LA
Sbjct: 90 KKMINSLITLLRDDTNAEQRTATTGYVLKRLIRSTGADDMKTVSLA 135
>BT021267-1|AAX33415.1| 1133|Drosophila melanogaster RE47565p
protein.
Length = 1133
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 61 KRLIQTCLNSPDPPTTSEQRMAATGFEETELTYNVVDEDMKVRQLA 106
K++I + + T +EQR A TG+ L + +DMK LA
Sbjct: 90 KKMINSLITLLRDDTNAEQRTATTGYVLKRLIRSTGADDMKTVSLA 135
>AL031581-6|CAA20885.1| 1133|Drosophila melanogaster
EG:115C2.2,FBgn0001341;l(1)1Bi protein.
Length = 1133
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 61 KRLIQTCLNSPDPPTTSEQRMAATGFEETELTYNVVDEDMKVRQLA 106
K++I + + T +EQR A TG+ L + +DMK LA
Sbjct: 90 KKMINSLITLLRDDTNAEQRTATTGYVLKRLIRSTGADDMKTVSLA 135
>AE014298-78|AAF45532.1| 1133|Drosophila melanogaster CG6189-PA
protein.
Length = 1133
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 61 KRLIQTCLNSPDPPTTSEQRMAATGFEETELTYNVVDEDMKVRQLA 106
K++I + + T +EQR A TG+ L + +DMK LA
Sbjct: 90 KKMINSLITLLRDDTNAEQRTATTGYVLKRLIRSTGADDMKTVSLA 135
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.315 0.131 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,286,173
Number of Sequences: 52641
Number of extensions: 283289
Number of successful extensions: 768
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 751
Number of HSP's gapped (non-prelim): 28
length of query: 164
length of database: 24,830,863
effective HSP length: 80
effective length of query: 84
effective length of database: 20,619,583
effective search space: 1732044972
effective search space used: 1732044972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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