Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001383-TA|BGIBMGA001383-PA|IPR005886|UDP-glucose
4-epimerase, IPR001509|NAD-dependent epimerase/dehydratase
(356 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 348 6e-97
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 317 1e-87
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i... 53 7e-08
SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase |Schizosaccharom... 37 0.005
SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.3
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 28 2.3
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 28 2.3
SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 4.0
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 27 4.0
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 27 5.3
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 26 7.1
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 348 bits (856), Expect = 6e-97
Identities = 182/353 (51%), Positives = 230/353 (65%), Gaps = 19/353 (5%)
Query: 5 VLVTGGAGYVGSHTVITLLERQSDGDPLEIVVVDNLSNAYCAEGEKKPEALKRIEELTGK 64
VLVTGGAGY+GSHT + LLE+ D +V+VDNL N+ + EA+ RIE+LTGK
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYD-----VVIVDNLCNS-------RVEAVHRIEKLTGK 56
Query: 65 TVHFYKVDIRCAEALDRIFENHNIDCVIHFAALKAVGESVEKPLEYYQVNINGTCTLFEI 124
V F++VD+ ALD++F N NI VIHFA LKAVGESV+ PL YY+ NI+GT L E
Sbjct: 57 KVIFHQVDLLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIEC 116
Query: 125 MRKHGVYKLVYSSSCTVYGEPEY----LPINESHPTGKSLTSPYGKSKYFCEEIMKDLCV 180
M+K+ V V+SSS TVYG+P +PI ES P + TSPYG++K F E I++D
Sbjct: 117 MKKYNVRDFVFSSSATVYGDPTRPGGTIPIPESCP--REGTSPYGRTKLFIENIIEDETK 174
Query: 181 SDKKWAIISLRYFNPVGAHESGRIGEDPSGIPNNLMPYISQVAVGRLKELKVFGDDYPTA 240
+K LRYFNP GAH SG +GEDP GIPNNL+PYI+QVAVGRL L VFGDDYPT+
Sbjct: 175 VNKSLNAALLRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTS 234
Query: 241 DGTGVRDYIHVCDLAAGHVQAIKLFHQPGFNGFHAINLGTGTGYSVLEMVAAFSNASGXX 300
DGT +RDYIHVCDLA HV A+ Q F NLG+GTG +V +++ AFS A G
Sbjct: 235 DGTPIRDYIHVCDLAEAHVAALDYLRQ-HFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRD 293
Query: 301 XXXXXXXXXXGDVTANVADVALATRSLGWRATRSLHDMCRDTWRWQEANPNGY 353
GDV A+ A L W+ +RS++++C DTWRWQ+ P G+
Sbjct: 294 LPYKVTPRRAGDVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKYPYGF 346
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 317 bits (779), Expect = 1e-87
Identities = 168/355 (47%), Positives = 221/355 (62%), Gaps = 20/355 (5%)
Query: 5 VLVTGGAGYVGSHTVITLLERQSDGDPLEIVVVDNLSNAYCAEGEKKPEALKRIEELTGK 64
+LVTGGAGY+GSHTVI L+ ++++VDNL N+ C + A+ R+E + K
Sbjct: 8 ILVTGGAGYIGSHTVIELINHG-----YKVIIVDNLCNS-CYD------AVARVEFIVRK 55
Query: 65 TVHFYKVDIRCAEALDRIFENHNIDCVIHFAALKAVGESVEKPLEYYQVNINGTCTLFEI 124
++ F+K+D+R E L +IF+ I VIHFAALKAVGES++ PLEYY NI GT TL +
Sbjct: 56 SIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNV 115
Query: 125 MRKHGVYKLVYSSSCTVYGEP----EYLPINESHPTGKSLTSPYGKSKYFCEEIMKDLCV 180
MR+H V +V+SSS TVYG+ +PI ES P T+PYGK+KY E I+KDL
Sbjct: 116 MREHRVKTVVFSSSATVYGDATRFDNMIPIPESCPNDP--TNPYGKTKYAIENIIKDLHT 173
Query: 181 SDKKWAIISLRYFNPVGAHESGRIGEDPSGIPNNLMPYISQVAVGRLKELKVFGDDYPTA 240
SD W LRYFNP+GAH SG +GEDP GIPNNL+P+++QVA+GR ++L VFGDDY +
Sbjct: 174 SDNTWRGAILRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSH 233
Query: 241 DGTGVRDYIHVCDLAAGHVQAIKLFHQPGFNG--FHAINLGTGTGYSVLEMVAAFSNASG 298
DGT +RDYIHV DLA GH+ A+ ++ + + NLGTG G SV ++ AF G
Sbjct: 234 DGTPIRDYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVG 293
Query: 299 XXXXXXXXXXXXGDVTANVADVALATRSLGWRATRSLHDMCRDTWRWQEANPNGY 353
GDV A A L W+A S+ D CRD W+W NP G+
Sbjct: 294 KDLPYEVVGRRTGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIENPFGF 348
>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
5-->4-isomerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 340
Score = 52.8 bits (121), Expect = 7e-08
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 4 AVLVTGGAGYVGSHTVITLLERQSDGDPLEIVVVDNLSNAYCAEGEKKPEALKRIEELTG 63
+VLV G +G++G H + L ER++ L I D N K + EL G
Sbjct: 5 SVLVIG-SGFLGGHIIRQLCEREN----LRIAAFDLFENE------------KLLHELHG 47
Query: 64 KTVHFYKVDIRCAEALDRIFENHNIDCVIHFAALKAVGESVEKPLEYYQVNINGTCTLFE 123
+ Y D+ ++R+FE + VIH A+ ++ + + Y++VN++GT + +
Sbjct: 48 QFT-MYTGDLTKQGDIERVFEEFHPRVVIHTASPV---HNLARDI-YFEVNVDGTANIIK 102
Query: 124 IMRKHGVYKLVYSSSC-TVYGEPEYLPINESHPTGKSLTSPYGKSKYFCEE 173
+K V LVY+SS V+ + + ++ES P + Y +SK E+
Sbjct: 103 ACQKFNVDALVYTSSAGVVFNGADLINVDESQPIPEVHMDAYNESKALAEK 153
>SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 36.7 bits (81), Expect = 0.005
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 31/261 (11%)
Query: 6 LVTGGAGYVGSHTVITLLERQSDGDPL---EIVVVDNLSNAYCAEGEKKPEALKRIEELT 62
L+TGGAG++GS+ + +++ D ++ V N + + ++ +P R E+
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNF--RFLEMD 70
Query: 63 GKTVHFYKVDIRCAEALDRIFENHNIDCVIHFAALKAVGESVEKPLEYYQVNINGTCTLF 122
T + + ++ E + I +I+FAA +V S PL + + NI T L
Sbjct: 71 LATNYKFLYQFMVEDS-----EINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLL 125
Query: 123 EIMR--------KHGVYKLVYSSSCTVYGE-PEYLPINESHPTGKSLTSPYGKSKYFCEE 173
E +R V+ S+ VYGE E ++E TSPY SK +
Sbjct: 126 ECVRILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNP--TSPYAASKAAVDL 183
Query: 174 IMKDLCVSDKKWAIISLRYFNPVGAHESGRIGEDPSGIPNNLMPYISQVAVGRLKELKVF 233
I++ S K ++ +R N G + P + L +I+Q K K+
Sbjct: 184 IIQSYRYS-YKISVTVIRANNVYGPRQYEE-KLIPMTL-GKLKKFINQ------KSQKIM 234
Query: 234 GDDYPT-ADGTGVRDYIHVCD 253
D DG R Y+H+ D
Sbjct: 235 QDKITLHGDGLHKRKYLHIYD 255
>SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 97 LKAVGESVEKPLEYYQVNINGTCTLFEIMRKHGVYKLVYSSSCTVYGE 144
++A GE +E+ + Y+ N NG C + E C+ YG+
Sbjct: 267 MEAFGEEIEEVVASYEKNYNGRCYISEEACSKATNDCSGHGRCSKYGQ 314
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 6 LVTGGAGYVGSHTVITLLERQSDGDPLEIVVVDNLSNAYCAEGE 49
+V GAG VGS T TLL G EIV++D N AEGE
Sbjct: 23 IVIVGAGNVGSTTAFTLL---LSGLAAEIVIID--LNKKKAEGE 61
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 95 AALKAVGESVEKPLEYYQVNING 117
A L +GE++++ +E Y+V ING
Sbjct: 243 ARLNEIGEAIQEVMESYEVEING 265
>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 1 MSRAVLVTGGAGYVGSHTVITLLER 25
MS VL+TG G+V SH+ LL +
Sbjct: 1 MSELVLITGITGFVASHSAEALLSQ 25
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 181 SDKKWAIISLRYFNPVGAHESGRIGEDPSGIPNNLMPYISQVAVGR-LKELKVFG 234
S+KK + + + PV + I E+ SGIP NL Y+ + + L + ++FG
Sbjct: 527 SNKKMLVSTNQTLRPVASILKHLINEESSGIPFNLEVYMKLLTFKKDLLKHRMFG 581
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 27.1 bits (57), Expect = 4.0
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 3 RAVLVTGGAGYVGSHTVITLLERQSDGDPLEIVVVDNLSNAYCAEGEKKPEALKRIEELT 62
+ VLVTG G++G+H LL+ G + V EK E ++ L
Sbjct: 4 KLVLVTGVTGFIGAHVAEQLLQA---GYRVRGTV---------RSMEKADELIRLNPGLK 51
Query: 63 GKTVHFYKVDIRCAEALDRIFENHNIDCVIHFAALKAVGESVEKPLEYYQVNINGTCTLF 122
K D+ + A D + + +++ + H A+ V + + + GT +
Sbjct: 52 DKIEFVIVKDVSASNAFDGVLK--DVELICHIASPFFVENVTDNKSQLLDPAVKGTLGIL 109
Query: 123 EIMR-KHGVYKLVYSSSCTVYGEPEYLPINESHPTGK 158
E + + ++V +SS G + P N T K
Sbjct: 110 EAAQGVKSIKRIVITSSFAAVGNFQIDPHNNKVYTEK 146
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 5 VLVTGGAGYVGSHTVITLLE 24
+ VTG AG++GS V LLE
Sbjct: 3 IFVTGAAGFIGSEIVRQLLE 22
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 64 KTVHFYKVDIRCAEALDRIFENHNIDCVIHFAALK---AVGESVEKPLEYYQVNINGTCT 120
K H +R E ++RI +H IH A+ A+ + PLE + + +N
Sbjct: 132 KVFHIKSSSLRKKEIIERILLDH-WKLRIHGDAMDDMLAIKDVTLCPLEMFFLLLNNASA 190
Query: 121 LFEIMRKHGVYKLV 134
L +I +KH + ++
Sbjct: 191 LRDISQKHAAHVVI 204
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,669,055
Number of Sequences: 5004
Number of extensions: 70233
Number of successful extensions: 133
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 116
Number of HSP's gapped (non-prelim): 13
length of query: 356
length of database: 2,362,478
effective HSP length: 74
effective length of query: 282
effective length of database: 1,992,182
effective search space: 561795324
effective search space used: 561795324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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