GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001382-TA|BGIBMGA001382-PA|IPR002100|Transcription
factor, MADS-box
         (137 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.032
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.22 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.52 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   3.6  
AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding pr...    23   3.6  
AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative odorant-b...    23   3.6  
AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding pr...    23   3.6  
AY748851-1|AAV28197.1|   98|Anopheles gambiae cytochrome P450 pr...    23   4.8  
AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    23   4.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 18  GLLGEMPDMYSAGRPPSALGGAGPLRPGMQPCPMPRAGVKRP 59
           G+  + P +    RP    G    ++PGMQP P    G++RP
Sbjct: 216 GMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRP 257


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 5/34 (14%)

Query: 21  GEMPDMYSAGRPPSALGGAGPLRP---GMQPCPM 51
           G +P M   G PP  +G  GPL P   GM+P PM
Sbjct: 90  GMIPGM--PGAPPLLMGPNGPLPPPMMGMRPPPM 121


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
          chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 4  PGGARESRFGPSYMGLLGEMPDMYSAGRPPSALGGAGPLRPGMQPCPMPRAGV 56
          P G +  +  P   G+ G+  +M   GR   A G AGP  PG  P P+   G+
Sbjct: 10 PQGLQGEKGAPGIQGIRGDKGEMGEQGR-TGAQGNAGP--PG-APGPVGPRGL 58


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 37  GGAGPLRPGMQPCPMPRAGVKRPSDQCYDDRPSQ 70
           GG     P   P P+PR    +P  Q    + +Q
Sbjct: 194 GGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQ 227


>AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding
          protein AgamOBP48 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 53 RAGVKRPSDQCYDDRPSQSVPLDHCPMPDIAD 84
          +AGV    + C    P  + P + CP P + D
Sbjct: 23 QAGVLAGDNPCAAGPPVDTNPAECCPTPMLVD 54


>AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative
          odorant-binding protein OBP3788 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 53 RAGVKRPSDQCYDDRPSQSVPLDHCPMPDIAD 84
          +AGV    + C    P  + P + CP P + D
Sbjct: 23 QAGVLAGDNPCAAGPPVDTNPAECCPTPMLVD 54


>AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding
          protein-8 protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 53 RAGVKRPSDQCYDDRPSQSVPLDHCPMPDIAD 84
          +AGV    + C    P  + P + CP P + D
Sbjct: 23 QAGVLAGDNPCAAGPPVDTNPAECCPKPMLVD 54


>AY748851-1|AAV28197.1|   98|Anopheles gambiae cytochrome P450
           protein.
          Length = 98

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 80  PDIADDGYASLQPKKSPPSNGKKTKGRVKIKMEYID----NKLRRYT 122
           PDI +   A +  ++   ++G+     V  KM+Y+D      LRR+T
Sbjct: 45  PDIQERLRAEIDEQRESLADGRTPTYEVLQKMKYLDMVVSEALRRWT 91


>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 39  AGPLRPGMQPCPMPRAGVKRPSDQCY 64
           AGP+R  +  C     G+K   D  Y
Sbjct: 98  AGPMRAALDICRTVADGIKNNCDAAY 123


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.136    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,783
Number of Sequences: 2123
Number of extensions: 7355
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 9
length of query: 137
length of database: 516,269
effective HSP length: 58
effective length of query: 79
effective length of database: 393,135
effective search space: 31057665
effective search space used: 31057665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)