Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001381-TA|BGIBMGA001381-PA|undefined
(410 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 31 1.5
U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine rec... 30 2.6
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 30 3.4
Z78064-4|CAB01512.1| 157|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68014-1|CAA92023.1| 335|Caenorhabditis elegans Hypothetical pr... 29 6.0
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 6.0
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 29 7.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 7.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 7.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 7.9
AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm rece... 29 7.9
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 31.1 bits (67), Expect = 1.5
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 233 NYKDDSSEPRGKCISVVTKIKGNDPK-HIPRNGKLLKPKPDLIEHYPNKKIKKIYLAQDE 291
N SS P S+ I G+D + I P P + Y N + + +
Sbjct: 190 NESCSSSRPENLNASIPAPIPGDDSRPSIDSEENPYTPCPRRSD-YDNSEFIGSTIDPFD 248
Query: 292 NGFYLKNQNNKVKQNTETSSEIYKERMMNFLNRCASLEGVSNPEATPSVHSDALNTIPEV 351
+ FY N N QN S + KE+ + +R ++ + + P H +N P
Sbjct: 249 DSFYTDNTTNNSHQNLYVSPQFVKEKTKSECDRYENVVEICSSPDPPPTHL-YVNVPPIY 307
Query: 352 ASAEINLENE 361
SA+ + +E
Sbjct: 308 PSADNIISSE 317
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 31.1 bits (67), Expect = 1.5
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 233 NYKDDSSEPRGKCISVVTKIKGNDPK-HIPRNGKLLKPKPDLIEHYPNKKIKKIYLAQDE 291
N SS P S+ I G+D + I P P + Y N + + +
Sbjct: 190 NESCSSSRPENLNASIPAPIPGDDSRPSIDSEENPYTPCPRRSD-YDNSEFIGSTIDPFD 248
Query: 292 NGFYLKNQNNKVKQNTETSSEIYKERMMNFLNRCASLEGVSNPEATPSVHSDALNTIPEV 351
+ FY N N QN S + KE+ + +R ++ + + P H +N P
Sbjct: 249 DSFYTDNTTNNSHQNLYVSPQFVKEKTKSECDRYENVVEICSSPDPPPTHL-YVNVPPIY 307
Query: 352 ASAEINLENE 361
SA+ + +E
Sbjct: 308 PSADNIISSE 317
>U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 9 protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 107 MASVKWYIDHNITWLFIASVMSTVVSLASFVMV 139
M+SV W +DHN W S + VSL+ F+++
Sbjct: 135 MSSVIWPVDHNKVWSKNLSFIVAFVSLSPFLII 167
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 29.9 bits (64), Expect = 3.4
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 219 SILSVKISYRGMRNNYKDDSSEPRGKCISVVTKIKGNDPKHIPRNGKLLKPKPDLIEHYP 278
+++ K+ +G +N K++ S K K + +P +GK + K
Sbjct: 17 NVVEKKVDKKGKKNGSKEEKSRNPEKEEKSKFKDLKEEKSKVPDDGKKQEDK-------- 68
Query: 279 NKKIKKIYLAQDENGFYLKNQNNKVKQNTETSSEIYKERMMNF 321
K++KK +DE KN+ +K+K +T K++ N+
Sbjct: 69 -KEVKKEEKKKDEKNKKSKNRKSKMKPPPDTQELANKKKFCNW 110
>Z78064-4|CAB01512.1| 157|Caenorhabditis elegans Hypothetical
protein F57B1.5 protein.
Length = 157
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 93 LLSVFG-LAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVWFAST 146
LL+++ LA G+ASI W+I W+ + SV + + L S ++ F +T
Sbjct: 49 LLAIYDILAIGIASISL---WFIVQKFYWIKVESVFNIIGILLSLASISTSFITT 100
>Z68014-1|CAA92023.1| 335|Caenorhabditis elegans Hypothetical
protein W04G3.1 protein.
Length = 335
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 190 SEESQGSRVFTTGVLSINILIAAFLEVLWS 219
S++ Q S +FTT ++I ++ FL+++WS
Sbjct: 21 SQQLQQSLLFTTYTVNILVVTGVFLKIMWS 50
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 322 LNRCASLEGVSNPEATPSVHSDALNTIPEVASAEINLENERKATTSP--LSWGDTPDHTV 379
L+R AS++ + P TPS + I + + + NL +ER+ T+ P S G
Sbjct: 1681 LSRFASVKNTT-PAGTPSSGGSSGGAIGKKSMSTTNLVDERQKTSGPSVASTGQAASAES 1739
Query: 380 YNQNTLNLENI 390
T +LEN+
Sbjct: 1740 LQHQTPSLENL 1750
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 28.7 bits (61), Expect = 7.9
Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 10/169 (5%)
Query: 251 KIKGNDPKHIPRNGKLLKPKPDLIEHYPNKKIKKIYLAQDENGFYLKNQNNKVKQNTETS 310
K+ N G +LK +P + + I + N KN+N + N+ TS
Sbjct: 139 KVFPNPISQSKNQGTMLKNRPPRLVRTHQSDLANIDTSHSRNPAETKNENTSSRTNSATS 198
Query: 311 S-EIYKERMMNFLN-----RCASLEGVSNPEATPSVHSDALNTIPEVASAEINLENERKA 364
S + Y + N + S E S + P V ++ A+ E + + +K
Sbjct: 199 SRKDYLNTSIPSANVTCTEKYRSSEFGSAKSSVPRVTCNSTKLETAQATHENIVLDPKKC 258
Query: 365 TTSPL---SWGDTPDHTVYNQNTLNLEN-IFNFTKKVDAKNEEPSENDN 409
T + L S+ DT + +NT N + I N + K+ + + + N
Sbjct: 259 TQNTLRSDSYQDTEKKIILPRNTSNSHHEICNDVQSYPGKHYDKNTSSN 307
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 263 NGKLLKPKPDLIEHYPNKKIKKIY---LAQDENGFYLKNQNNKVKQNTETSSEIYKER 317
+ KL K K D ++ + K+KK L Q+ +G K ++NK+KQ E +++ KE+
Sbjct: 7822 DAKLKKDKDDKLKQEADGKLKKEKDNKLKQEADGKLKKEKDNKLKQ--EADAKLKKEK 7877
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 263 NGKLLKPKPDLIEHYPNKKIKKIY---LAQDENGFYLKNQNNKVKQNTETSSEIYKER 317
+ KL K K D ++ + K+KK L Q+ +G K ++NK+KQ E +++ KE+
Sbjct: 8262 DAKLKKDKDDKLKQEADGKLKKEKDNKLKQEADGKLKKEKDNKLKQ--EADAKLKKEK 8317
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 263 NGKLLKPKPDLIEHYPNKKIKKIY---LAQDENGFYLKNQNNKVKQNTETSSEIYKER 317
+ KL K K D ++ + K+KK L Q+ +G K ++NK+KQ E +++ KE+
Sbjct: 7842 DAKLKKDKDDKLKQEADGKLKKEKDNKLKQEADGKLKKEKDNKLKQ--EADAKLKKEK 7897
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 263 NGKLLKPKPDLIEHYPNKKIKKIY---LAQDENGFYLKNQNNKVKQNTETSSEIYKER 317
+ KL K K D ++ + K+KK L Q+ +G K ++NK+KQ E +++ KE+
Sbjct: 8282 DAKLKKDKDDKLKQEADGKLKKEKDNKLKQEADGKLKKEKDNKLKQ--EADAKLKKEK 8337
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 263 NGKLLKPKPDLIEHYPNKKIKKIY---LAQDENGFYLKNQNNKVKQNTETSSEIYKER 317
+ KL K K D ++ + K+KK L Q+ +G K ++NK+KQ E +++ KE+
Sbjct: 7842 DAKLKKDKDDKLKQEADGKLKKEKDNKLKQEADGKLKKEKDNKLKQ--EADAKLKKEK 7897
Score = 28.7 bits (61), Expect = 7.9
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 263 NGKLLKPKPDLIEHYPNKKIKKIY---LAQDENGFYLKNQNNKVKQNTETSSEIYKER 317
+ KL K K D ++ + K+KK L Q+ +G K ++NK+KQ E +++ KE+
Sbjct: 8282 DAKLKKDKDDKLKQEADGKLKKEKDNKLKQEADGKLKKEKDNKLKQ--EADAKLKKEK 8337
>AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm
receptor protein 40 protein.
Length = 331
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 23 RRYSASTVSGLAWVHIALSATSFLLACLALVNPD 56
R+ + + SG+ V +AL+A F+ LALV+PD
Sbjct: 90 RQAALAIYSGIYMVILALAAAQFVYRYLALVHPD 123
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,773,987
Number of Sequences: 27539
Number of extensions: 403461
Number of successful extensions: 920
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 899
Number of HSP's gapped (non-prelim): 24
length of query: 410
length of database: 12,573,161
effective HSP length: 83
effective length of query: 327
effective length of database: 10,287,424
effective search space: 3363987648
effective search space used: 3363987648
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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