Silkworm BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001380-TA|BGIBMGA001380-PA|IPR000357|HEAT
         (1377 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -relat...    78   4e-14
At4g28780.1 68417.m04115 GDSL-motif lipase/hydrolase family prot...    33   1.3  
At2g30920.1 68415.m03769 hexaprenyldihydroxybenzoate methyltrans...    31   4.1  
At3g04600.2 68416.m00491 tRNA synthetase class I (W and Y) famil...    30   9.4  
At3g04600.1 68416.m00490 tRNA synthetase class I (W and Y) famil...    30   9.4  

>At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -related
           similar to CLIP-associating protein CLASP2 (GI:13508651)
           [Rattus norvegicus]
          Length = 1439

 Score = 78.2 bits (184), Expect = 4e-14
 Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 3/206 (1%)

Query: 227 WEKRVDALKKIRALLTANVHQQYPVEFAAHLKDLSIPFLVVIKDLRSQVVREACITIAHM 286
           W  R+ A++++  L+       Y   F   LK L  P    + D RS +V++AC  +  +
Sbjct: 300 WSMRISAMRRVEGLVAGGA-TDYSC-FRGLLKQLVGPLSTQLADRRSTIVKQACHLLCLL 357

Query: 287 AKVLKNKMEQFSLYILQELINLIQNAAKVVSSAGTVCVQYIVSFVHSPRLIPVLLTNLTS 346
           +K L    E  +   +  L  L+     V++ +   C++ ++    + R++P +  +   
Sbjct: 358 SKELLGDFEACAETFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAESAKH 417

Query: 347 NKSKEIRSTLSEVLVMILEKWP-AQTIEKQQQNIRDAIRVACVDADSTARNHGRRAYWSY 405
           +++  +R+   E  ++ LE WP A  I++      D IR    DA S  R   R  Y  +
Sbjct: 418 DRNAILRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRMF 477

Query: 406 QRLFPAEAELLFERLDAAAQKQLERE 431
            + +P  +  LF   D   Q+ +  E
Sbjct: 478 AKTWPDRSRRLFSSFDPVIQRLINEE 503



 Score = 43.6 bits (98), Expect = 0.001
 Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 3/141 (2%)

Query: 1112 QEYFDLILLKLIQAYESLNKEVMRAVEAGMPHIARALPALQVLALLKPVIRTRGYPTSLC 1171
            ++  ++++ KL+   +    +V    E  +  +       + L+++ P++ T    T + 
Sbjct: 1287 EDSVEIVIEKLLHVSKDTVPKVSTEAEQCLTTVLSQYDPFRCLSVIVPLLVTEDEKTLVA 1346

Query: 1172 ALK-LAGEVAKARPHELTDDIVQQLMEGVSQLADHQNSAVRKAAVFCMVAFTFALGEARM 1230
             +  L   V +    EL D +    +  V +    Q++ VRK  VFC+V     LG+A +
Sbjct: 1347 CINCLTKLVGRLSQEELMDQL-SSFLPAVFEAFGSQSADVRKTVVFCLVDIYIMLGKAFL 1405

Query: 1231 QPHLTHLSVSKYRLLQVTTQR 1251
             P+L  L+ ++ RL+ +   R
Sbjct: 1406 -PYLEGLNSTQVRLVTIYANR 1425


>At4g28780.1 68417.m04115 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 367

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 22/81 (27%), Positives = 37/81 (45%)

Query: 635 ELLNKMFVDAHTKVFSLLRDAVCELLLVHWQQLKDWLYQLMFRLLMKLGTDILGSVQSKI 694
           + +N  F    T+          +LL+  ++++   LY+L  R +M  GT  LG V +++
Sbjct: 171 DFVNNYFFPISTRRRQSSLGEFSQLLISEYKKILTSLYELGARRVMVTGTGPLGCVPAEL 230

Query: 695 MKTLDVIHECFPAELQLHNIF 715
             +  V  EC P   Q   IF
Sbjct: 231 ASSGSVNGECAPEAQQAAAIF 251


>At2g30920.1 68415.m03769 hexaprenyldihydroxybenzoate
           methyltransferase identical to
           hexaprenyldihydroxybenzoate methyltransferase SP:O49354
           from [Arabidopsis thaliana]
          Length = 322

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 228 EKRVDALKKIRALLTANV--HQQYPVEFAAHLKDLSIPFLVVIKDLRSQVVREACITIA- 284
           EK  D  +K  A+L+  V  H   P EF   L  L+IP    +    ++ +R    TI  
Sbjct: 190 EKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTMRAYASTIVG 249

Query: 285 --HMAKVLKNKMEQFSLYILQELINLIQNAAKVVSSAGTVCVQYIVSFVHSP 334
             ++ + L     Q+S ++  E +++I   A       +V V+ I  FV++P
Sbjct: 250 AEYILRWLPKGTHQWSSFVTPEEMSMILQRA-------SVDVKEIAGFVYNP 294


>At3g04600.2 68416.m00491 tRNA synthetase class I (W and Y) family
           protein contains Pfam profile: PF00579 tRNA synthetases
           class I (W and Y)
          Length = 402

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 609 DSYRRHDANYLNSGRLLTDEQLRRLTELLNKMFVDAHTKVFSLLRDAVCELLL 661
           DS   H       GR+LT E  +RLTE+L ++ V+ H +  + + D + +  +
Sbjct: 341 DSELEHIKKEYGEGRMLTGEVKKRLTEVLTEI-VERHRRARAAVTDEMVDAFM 392


>At3g04600.1 68416.m00490 tRNA synthetase class I (W and Y) family
           protein contains Pfam profile: PF00579 tRNA synthetases
           class I (W and Y)
          Length = 402

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 609 DSYRRHDANYLNSGRLLTDEQLRRLTELLNKMFVDAHTKVFSLLRDAVCELLL 661
           DS   H       GR+LT E  +RLTE+L ++ V+ H +  + + D + +  +
Sbjct: 341 DSELEHIKKEYGEGRMLTGEVKKRLTEVLTEI-VERHRRARAAVTDEMVDAFM 392


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.319    0.132    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,178,805
Number of Sequences: 28952
Number of extensions: 934005
Number of successful extensions: 2393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2385
Number of HSP's gapped (non-prelim): 11
length of query: 1377
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1287
effective length of database: 9,464,880
effective search space: 12181300560
effective search space used: 12181300560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)