GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001380-TA|BGIBMGA001380-PA|IPR000357|HEAT
         (1377 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29)                   111   4e-24
SB_36083| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   4.9  
SB_34006| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   4.9  
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   8.5  

>SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29)
          Length = 1239

 Score =  111 bits (267), Expect = 4e-24
 Identities = 49/103 (47%), Positives = 75/103 (72%)

Query: 618 YLNSGRLLTDEQLRRLTELLNKMFVDAHTKVFSLLRDAVCELLLVHWQQLKDWLYQLMFR 677
           +L S R+++D +L ++ + L ++F D + KV+S   DA+CE ++VH   L DWL+ L+ R
Sbjct: 740 FLKSSRVMSDVELSKIKDCLTRLFCDPNNKVYSAFLDALCEFIVVHKVDLNDWLFVLLSR 799

Query: 678 LLMKLGTDILGSVQSKIMKTLDVIHECFPAELQLHNIFRFLSD 720
           LL+KLGTDILGS+QSKI++ LDVI + FP +LQ   + RF++D
Sbjct: 800 LLIKLGTDILGSMQSKIVRVLDVIRDSFPYDLQFSILTRFITD 842



 Score =  106 bits (254), Expect = 1e-22
 Identities = 80/233 (34%), Positives = 116/233 (49%), Gaps = 38/233 (16%)

Query: 207 RGLDDTVXXXXXXXXXXXXXWEKRVDALKKIRALLTANVHQQYPVEFAAHLKDLSIPFLV 266
           + L+D +             WE+RV ALKK+R+L  A    +Y   F   ++ +   F +
Sbjct: 269 KDLNDEMAKIQTILSDDKNDWEQRVAALKKVRSLALAG-GLEYD-NFILLIRLMEGAFKL 326

Query: 267 VIKDLRSQVVREACITIAHMAKVLKNKMEQFSLYILQELINLIQNAAKVVSSAGTVCVQY 326
             KDLRS V+RE C+T+  ++  LKN+ +  +  +L  LINLI N+AK            
Sbjct: 327 SAKDLRSTVIRETCVTLGFLSTELKNQFDHTAEAVLPALINLIPNSAK------------ 374

Query: 327 IVSFVHSPRLIPVLLTNLTSNKSKEIRSTLSEVLVMILEKWPAQTIEKQQQNIRDAIRVA 386
                H+ RL+P++ +NL S+KS  IR  +SE                    I +AIR  
Sbjct: 375 ---NTHARRLVPIITSNL-SSKSSVIRRNVSE--------------------IEEAIRKG 410

Query: 387 CVDADSTARNHGRRAYWSYQRLFPAEAELLFERLDAAAQKQLERERNVGNVGS 439
             DADS AR   RRA+W +   F  +AE L + LDA+ QKQLE +RN G   +
Sbjct: 411 ISDADSEARASARRAFWVFHDHFRDKAESLLKSLDASKQKQLENDRNGGGAST 463



 Score = 55.6 bits (128), Expect = 3e-07
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 35/167 (20%)

Query: 1108 RPQWQEYFDLI---LLKLIQAYESLNKEVMRAVEAGMPHIARALPALQVLALLKPVIRTR 1164
            R Q   + D+I   + K++QA++   KEV+R  E     IAR++     + +L P+I   
Sbjct: 1043 RAQPHTFHDVIGTTVSKVLQAHKDPQKEVVRLAEEAAATIARSVAPEDCMRVLGPIINDS 1102

Query: 1165 GYPTSLCALKLAGEVAKARP--------------HELTDDIVQQLMEGVSQLA------- 1203
             +P SL ALK+  +  +  P              H+    ++ Q++EGV  +        
Sbjct: 1103 EFPVSLAALKMLTKTERLNPTPEFASLVCGGVYFHDTL--LIFQVVEGVDSVTIEEHLPD 1160

Query: 1204 ---------DHQNSAVRKAAVFCMVAFTFALGEARMQPHLTHLSVSK 1241
                     DH  S+VRKA+VF +VA    +GE  + PHL  LS +K
Sbjct: 1161 LIPGLVKCYDHVESSVRKASVFSLVALHAIVGEEVLLPHLAELSGTK 1207



 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 18  SVHRHGAVELQLRAAVPNIXXXXXXXXXXXXXXXVQLLADMYRHVGERLRQDLKKKELLP 77
           +++  G+  L +   VP+I               +  L ++YRHVGE++R DL KK  +P
Sbjct: 110 AINIFGSSSLTISKFVPHICKLLGDPNSQVRERAIDTLVEIYRHVGEKVRIDLSKKG-IP 168

Query: 78  AQKLALLEQKFDETREAG 95
           + +L+++  KFD+   +G
Sbjct: 169 SSRLSVIYAKFDQVARSG 186


>SB_36083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 14/47 (29%), Positives = 27/47 (57%)

Query: 341 LTNLTSNKSKEIRSTLSEVLVMILEKWPAQTIEKQQQNIRDAIRVAC 387
           +T   S K +E + TLS    ++ E    +TIE++ Q +++A+ + C
Sbjct: 267 ITLKDSKKKEEFKVTLSNKFQVLEELLEEETIEEKWQKVKEAVTLTC 313


>SB_34006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 609

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 54  LLADMYRHVGERLRQDLKKKELLPAQKLALLEQKFDETREAGLLLTSAVPGTDET 108
           +  ++Y H  ++  QD+K +ELL A K ++   K DE   A +   SA+P   ET
Sbjct: 227 IAGELYIHFKDKSIQDVKMQELLKAVKRSV---KVDEPDAASIQTVSALPPVLET 278


>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 325

 Score = 30.7 bits (66), Expect = 8.5
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 582 EDSSACEGGRGRDDDSEASSVCSERSLDSYRRHDANYLNSGRLLTDEQL-RRLTELLN-K 639
           ++S A EG   +D D E       R+ D+ R + AN +N     TD +L +  T  +N  
Sbjct: 14  DESLAEEGLSSQDSDEELPVEWEVRTTDTGRVYYANTVNHQTTFTDPRLSKESTSCINIS 73

Query: 640 MFVDAHTKVFSLLRD 654
              DA +  + +L+D
Sbjct: 74  QKYDASSTTYDVLKD 88


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.319    0.132    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,922,383
Number of Sequences: 59808
Number of extensions: 1343546
Number of successful extensions: 3349
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3338
Number of HSP's gapped (non-prelim): 12
length of query: 1377
length of database: 16,821,457
effective HSP length: 91
effective length of query: 1286
effective length of database: 11,378,929
effective search space: 14633302694
effective search space used: 14633302694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)