Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001379-TA|BGIBMGA001379-PA|IPR002659|Glycosyl
transferase, family 31
         (557 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   5.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   5.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 6/57 (10%)

Query: 60  KFFLFSSAVILFCVLMYIPVYNKA--NNQISKAIVSGWSVHSNRDTKLYVRPQNVTV 114
           K F   +A+I+  + ++  ++     ++Q+++ + S     SNR T L ++PQN ++
Sbjct: 261 KQFYIHNALIVRALFLFFQLWATVYTSSQVTREVQS----RSNRMTPLKLQPQNFSI 313


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 6/57 (10%)

Query: 60  KFFLFSSAVILFCVLMYIPVYNKA--NNQISKAIVSGWSVHSNRDTKLYVRPQNVTV 114
           K F   +A+I+  + ++  ++     ++Q+++ + S     SNR T L ++PQN ++
Sbjct: 257 KQFYIHNALIVRALFLFFQLWATVYTSSQVTREVQS----RSNRMTPLKLQPQNFSI 309


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,552
Number of Sequences: 317
Number of extensions: 5451
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 557
length of database: 114,650
effective HSP length: 60
effective length of query: 497
effective length of database: 95,630
effective search space: 47528110
effective search space used: 47528110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)