Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001379-TA|BGIBMGA001379-PA|IPR002659|Glycosyl
transferase, family 31
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 30 0.74
SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|ch... 30 0.74
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.3
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 29 2.2
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 28 3.0
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 28 3.0
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 28 3.9
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 27 5.2
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 27 6.9
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 9.1
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 27 9.1
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 27 9.1
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 27 9.1
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 30.3 bits (65), Expect = 0.74
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 243 YNFESNVMRIPPRGFEDNPDLDKVLSILKLDKRFLKVEEKLRNTKVEPDFKLAFILGLPV 302
YN + R+ P FE L + L++L D R + L+ + P+ + G P
Sbjct: 158 YNLLKQINRMVPYNFERTTPLIESLTMLSRDFREYSEKFDLQGDSILPEVVYSATKGNPR 217
Query: 303 NDS-NSAVQRKIDEEIDKYGDIIQEDFIDSYNNLTLKS 339
+ + Q +E ++ + D + E+F+ + LK+
Sbjct: 218 FEMLQTGEQEDAEEFLNLFLDELHEEFVRERRHYLLKN 255
>SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 333
Score = 30.3 bits (65), Expect = 0.74
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 211 LESEAPEKRFDDEMLPEFDMNREIGEQTENYDYNFESNVMRIPPRGFEDNPDLDKVLSIL 270
++ A +RF D M + N + E Y + E M P +ED D LSIL
Sbjct: 1 MDFHAISQRFIDMMRSKNSQNAS--QPPETYPFYHEVRQMSQHPWMYEDPELQDYALSIL 58
Query: 271 KLDKRFLKVEE 281
LDK F E
Sbjct: 59 PLDKLFQDASE 69
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 1.3
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 179 LIGKSKRMKREIADLSNLLPHLAAALRD-----NVDNLESEAPEKRFDDEMLPEFDMNRE 233
L + +R ++E+AD N L HL + D + NLE E E R D E L
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLV------- 1541
Query: 234 IGEQTENYDYNFESNVMRIPPRGFEDNPD-LDKVLSILKLDKRFLKVEEK 282
+Q +N + P +G +N D + ++ S L+ K++ + E++
Sbjct: 1542 --QQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKE 1589
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 311 RKIDEEIDKYGDIIQEDFIDSYNNLTLKSIMMLKWINNKCKD 352
R++DE I + +IQ + NNL+L ++K+I +K D
Sbjct: 581 RELDELIIETNPLIQRATTELINNLSLSPYCLIKFIGDKDSD 622
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 126 GLFLLIVVCSATGNFEQ--RQAIRDTWGSQARYTEIRKVSVKIREKYKNYNYSYDL-IGK 182
G + I+V EQ RQA + ++G+ + E+ K + KI+EK YD+ IG
Sbjct: 114 GGYRAIIVAPTRELCEQIYRQAEKLSFGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGT 173
Query: 183 SKRMKREI 190
R+ + I
Sbjct: 174 PMRLVQAI 181
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 166 IREKYKNYNYSYDLIGKSKRMKREIADLSNLLPHLAAALRDNVDNLESEAPEKRFDDEML 225
IR + + N Y +IG+ + R+I+ + ++P A DNVD + ++ F L
Sbjct: 1006 IRATFTSLNDEY-MIGEDPELTRKISPVEGIIPEDANVRFDNVDIFLYDC-DQHFSTVCL 1063
Query: 226 PEFDMNREIGEQ 237
+M+ E E+
Sbjct: 1064 YSANMHMEFREK 1075
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.9 bits (59), Expect = 3.9
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 272 LDKR-FLKVE--EKLRNTKVEPDFKLAFILGLPVNDSNSAVQRKIDEEIDKYGDI 323
+D+R FL+ + E ++ V + FILGLP N+ A I EE YGD+
Sbjct: 77 VDRRNFLRTDYNEYIKEFAVNDTVDVRFILGLPENEQELAT---IREEQRTYGDL 128
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 144 QAIRDTWGSQARYTEIRKVSVKIREKYKNYNYSYDLIGKSKRMKREIADLSNLLPHL 200
QA+ + + A + + R + +R K K+ +S+D+ + ++ L+NLL HL
Sbjct: 297 QAVSNVTSAHALFPQYRIDMLTLRMKVKD-PFSFDMFRFGQAIESTFRSLNNLLEHL 352
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 178 DLIGKSKRMKREIADLSNLLPHLAAALRD--NVDNLESEAPEKR--FDDEMLPEFD 229
D+ ++ +I+D+ NL+P L RD + + P+ R FD LP+ D
Sbjct: 166 DINDPRAKLLNDISDVQNLMPRLLPCTRDWFAIYKIPDGKPKNRFFFDGNYLPKSD 221
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 9.1
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 261 PDLDKVLSILKLDKRFLKVEEKLRNTKVEPDFKLAFILGLPVNDSNSAVQRKIDEEIDKY 320
PDLDK+ IL+ D+ + V PD + F LG + DS+ ++ E++
Sbjct: 116 PDLDKLSDILRSDEYMI---------SVLPDDSVLFSLGDEL-DSDFEDDNTLEIEVENP 165
Query: 321 GDIIQEDFIDSYNNLTLKSIMMLKWINNKCKDKVRYILKTDDD 363
D+ ++ I L L++ +++ + KDK+ + D
Sbjct: 166 ADVSKDAEI---KKLKLQNQLLISQLEEIRKDKMNELTSQTTD 205
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 160 RKVSVKIRE-KYKNYNYSYDLIGKSKRMKR--EIADLSNLLPHLAAALRDNVDNLESEAP 216
RK S +++E + KNY+ S DL+ K+ R+ R E + +N L + + +SE P
Sbjct: 609 RKASSQVKELEVKNYSKSTDLLKKTLRIPRNDEPLEAANQFDLLKVSPQQ-----KSEVP 663
Query: 217 EKRFDDEMLPEFDMNREIGEQTE 239
KR +E+ NR+ E +E
Sbjct: 664 PKR--NELSQSKLKNRKKKENSE 684
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 95 WS--VHSNRDT-KLYVRPQNVTVVHEPTALCTGAGLFLLIVV 133
WS +HS R KLY +P+ + + P LC + +LI V
Sbjct: 212 WSDLLHSYRQPLKLYAKPEELGDMFWPFLLCFSPSIIMLITV 253
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 416 YSPRYMYNARVYPKYLSGTGYVMSV 440
Y+ YM+NA +Y + + + Y++SV
Sbjct: 40 YTKSYMHNAEIYKCFPTKSNYILSV 64
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,241
Number of Sequences: 5004
Number of extensions: 111865
Number of successful extensions: 281
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 278
Number of HSP's gapped (non-prelim): 13
length of query: 557
length of database: 2,362,478
effective HSP length: 76
effective length of query: 481
effective length of database: 1,982,174
effective search space: 953425694
effective search space used: 953425694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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