Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001379-TA|BGIBMGA001379-PA|IPR002659|Glycosyl
transferase, family 31
         (557 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    30   0.044
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   3.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   3.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   6.6  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   8.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   8.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   8.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   8.8  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 30.3 bits (65), Expect = 0.044
 Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 7/167 (4%)

Query: 162 VSVKIREKYKNYNYSY-DLIGKSKRMKRE-IADLSNLLPHLAAALRDNVDNLESEAPEKR 219
           +S KI++  +N + +   L  +S+ +KR  I  +   + H    L D + N      E  
Sbjct: 117 ISKKIKKTMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIAKSEFG 176

Query: 220 FDDEMLPEFDMNREIGEQTENYDYNFESNVMRIPPRGFEDNPDLDKVLSILKLDKRFLKV 279
              + +  FD+  E GE+    D    +  + +  RG       D V+ ++  D      
Sbjct: 177 GITQCIGAFDVTLESGERVTFLDTPGHAAFISMRHRGAHIT---DIVVLVVAADDGVK-- 231

Query: 280 EEKLRNTKVEPDFKLAFILGLPVNDSNSAVQRKIDEEIDKYGDIIQE 326
           E+ L++ ++  D K+  I+ +   D  +    K+  E+ K+G +I+E
Sbjct: 232 EQTLQSIEMAKDAKVPIIVAINKIDKPNIDIIKVQYELAKHGIVIEE 278


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 111 NVTVVHEPTALCTGAGLFLL 130
           N  V+ +PT LC G G + L
Sbjct: 223 NAVVIEQPTFLCKGDGKWYL 242


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 381 EFDERPSKGPGEREYLLLGDLICGARPVQDANNKWYSP 418
           ++D R +K   + E   L + ICG       NN +YSP
Sbjct: 230 DYDPRYAKMTIDGESFTLKNGICGMALSPVTNNLYYSP 267


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 5   PSHKNWHDEERY-HVHSDESPVLSYRHEKYKN 35
           P H + H  +   H+H  + P LS  +  Y N
Sbjct: 350 PHHHHHHQTQSLQHLHYRQPPTLSESYSSYVN 381



 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 5/31 (16%)

Query: 7   HKNWHDEERYHVHSDESPVLSYRHEKYKNYT 37
           H + H   +YH H   SP     H ++ N+T
Sbjct: 317 HPHQHHPSQYHPHRGSSP-----HHQHGNHT 342


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 379 SKEFDERPSKGPGEREYLLLGDLICGARPVQDANN-KW-YSPRYMYNARVYPKYLSGTGY 436
           SKE     ++    RE  ++  L    + + + NN K+ Y+ +Y YN   Y K L    Y
Sbjct: 63  SKERSRDRTERERSREPKIISSL--SNKTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNY 120

Query: 437 VMSVD 441
           +++++
Sbjct: 121 IINIE 125


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 184 KRMKREIADLSNLLPHLAAALRDNVDNLESEAPEKRFDDEMLPEFDMNR 232
           +R  R    L ++L     AL   + NLE+  PE+   +E+L    +NR
Sbjct: 10  RRYLRNRNQLQHVLEETQQALE--LINLENFFPEENVVEELLSPLTLNR 56


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 290 PDFKLAFILGLPVNDSNSAVQRKIDEEIDKYGDIIQE-DFIDSYNNLTLKSIMMLKW 345
           P F   F + + V  S S++   +   ID+Y  + Q   +    NN  +   ++L W
Sbjct: 255 PGFVCDFYIAMDVTCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTILLVW 311


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)

Query: 27  SYRHEKYKNYTQYSN 41
           +Y++  Y NY  Y+N
Sbjct: 321 NYKYSNYNNYNNYNN 335


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,696
Number of Sequences: 429
Number of extensions: 7674
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 9
length of query: 557
length of database: 140,377
effective HSP length: 61
effective length of query: 496
effective length of database: 114,208
effective search space: 56647168
effective search space used: 56647168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)