Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001378-TA|BGIBMGA001378-PA|undefined
         (130 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.4  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 21  VTEKPLYIEDNTNGYYSDASNSVIRRVNVPKEPSPTY 57
           V  + +Y+    N   S+A  +VI +V   +EP   Y
Sbjct: 85  VDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPY 121


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 21  VTEKPLYIEDNTNGYYSDASNSVIRRVNVPKEPSPTY 57
           V  + +Y+    N   S+A  +VI +V   +EP   Y
Sbjct: 85  VDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPY 121


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 21  VTEKPLYIEDNTNGYYSDASNSVIRRVNVPKEPSPTY 57
           V  + +Y+    N   S+A  +VI +V   +EP   Y
Sbjct: 85  VDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPY 121


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.126    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,003
Number of Sequences: 429
Number of extensions: 1480
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 130
length of database: 140,377
effective HSP length: 51
effective length of query: 79
effective length of database: 118,498
effective search space:  9361342
effective search space used:  9361342
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.8 bits)
S2: 40 (20.2 bits)