GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001378-TA|BGIBMGA001378-PA|undefined
         (130 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    25   0.63 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   3.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   5.9  

>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 31  NTNGYYSDASNSVIRRVNVPKEPSPTY 57
           N N Y SD  N ++ R   P  PS  Y
Sbjct: 167 NRNRYVSDVENPLLYRDRTPYNPSRDY 193


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 43  VIRRVNVPKEPSPTYMAPVETRRKSIHPVPENSEEV 78
           +++ +N  K P      P+   +  IH  PE+ + +
Sbjct: 573 ILKEMNKQKLPGEVTFMPLNRLQVKIHDYPEDPDSI 608


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)

Query: 109  NRISSEVDKNVVSLEDNSANKK 130
            N + +EV+K+ V  ED++ +KK
Sbjct: 1255 NGVIAEVEKSQVDGEDDTGDKK 1276


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.126    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,556
Number of Sequences: 2123
Number of extensions: 3862
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 130
length of database: 516,269
effective HSP length: 57
effective length of query: 73
effective length of database: 395,258
effective search space: 28853834
effective search space used: 28853834
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)