GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001378-TA|BGIBMGA001378-PA|undefined
         (130 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown prot...    27   7.9  
AE014296-2224|AAF49861.2|  702|Drosophila melanogaster CG11262-P...    27   7.9  
AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA...    27   7.9  

>AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown
           protein.
          Length = 1231

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 1/91 (1%)

Query: 37  SDASNSVIRRVNVPKEPSPTYMAP-VETRRKSIHPVPENSEEVGXXXXXXXXXXXXXXXX 95
           SD +NS +   +  K  SP   +P +E     + P    +E V                 
Sbjct: 857 SDINNSSLMNESNYKVLSPRAQSPSIEINAAQLSPTHNATENVNPKSHSILTVGAASDDN 916

Query: 96  XXXXXXDEKRRRYNRISSEVDKNVVSLEDNS 126
                   +    N    E+D+N++ LED+S
Sbjct: 917 LGPRSKLSEANSVNLSKWEIDENILGLEDSS 947


>AE014296-2224|AAF49861.2|  702|Drosophila melanogaster CG11262-PA
          protein.
          Length = 702

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 37 SDASNSVIRRVNVPKEPSPTYMAPVET 63
          S   +S+ RR+ +P++P P Y+   ET
Sbjct: 25 SSHQSSIPRRLRMPEQPEPNYLDEPET 51


>AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA
           protein.
          Length = 1231

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 1/91 (1%)

Query: 37  SDASNSVIRRVNVPKEPSPTYMAP-VETRRKSIHPVPENSEEVGXXXXXXXXXXXXXXXX 95
           SD +NS +   +  K  SP   +P +E     + P    +E V                 
Sbjct: 857 SDINNSSLMNESNYKVLSPRAQSPSIEINAAQLSPTHNATENVNPKSHSILTVGAASDDN 916

Query: 96  XXXXXXDEKRRRYNRISSEVDKNVVSLEDNS 126
                   +    N    E+D+N++ LED+S
Sbjct: 917 LGPRSKLSEANSVNLSKWEIDENILGLEDSS 947


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.309    0.126    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,619,993
Number of Sequences: 52641
Number of extensions: 212969
Number of successful extensions: 490
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 489
Number of HSP's gapped (non-prelim): 3
length of query: 130
length of database: 24,830,863
effective HSP length: 77
effective length of query: 53
effective length of database: 20,777,506
effective search space: 1101207818
effective search space used: 1101207818
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)