Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001377-TA|BGIBMGA001377-PA|undefined
         (447 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.9  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   5.8  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 91  PFCCTRLRCLVVVRGE--VWTRVLGQPWETLPAAPWSHMY 128
           PF    L  + +V  E  VWT+++G  +  L A  +  MY
Sbjct: 399 PFLVANLAFVTIVTYETFVWTQIMGAEFFKLYAVEYFQMY 438


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 369  DGDHYKRGSGEGHDPGRVRTRNVPNAARIGFAITTTDIVLKPTSV 413
            D D +K   GEG  P     RNV   A  G   T   I  +P SV
Sbjct: 1741 DLDDFKNRCGEGRHPLLTTIRNVLADAGTGQQETIPPIDEEPPSV 1785


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 186 APTPDIVIALSTNNDEKEPKRDIE 209
           AP P+    L TNN +   KR I+
Sbjct: 51  APAPERTSVLVTNNSDLRCKRKIQ 74


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.130    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,640
Number of Sequences: 317
Number of extensions: 4531
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 447
length of database: 114,650
effective HSP length: 59
effective length of query: 388
effective length of database: 95,947
effective search space: 37227436
effective search space used: 37227436
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)