Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001377-TA|BGIBMGA001377-PA|undefined
(447 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.33
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 30 0.75
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 29 1.00
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 1.00
SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |S... 29 1.00
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 1.3
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 1.7
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 29 1.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 2.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 2.3
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 28 2.3
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 28 2.3
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 28 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 3.0
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 3.0
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 28 3.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 4.0
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 4.0
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 27 5.3
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 27 5.3
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 27 5.3
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 5.3
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 27 5.3
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 27 5.3
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 7.0
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 27 7.0
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 27 7.0
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 27 7.0
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 27 7.0
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 27 7.0
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 27 7.0
SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyc... 27 7.0
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 9.3
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 9.3
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 26 9.3
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 26 9.3
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 9.3
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 31.1 bits (67), Expect = 0.33
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 155 SEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRV 214
S+ P+ + T E + E V +APT + + T +DE EP +K
Sbjct: 385 SKIPVPEEASINEHSNITDEAVSLPEPVYPNAPTSAVSVHNPTISDEAEPTERAFLKKEK 444
Query: 215 HEIPDEERNEPENQDVEELPASTDKPLG-NSDEAYNSNTDAMTKKPKTK 262
+I E++N P E + ST P N E + ++++ K K
Sbjct: 445 PQISKEKKN-PNVTHEEFVEKSTALPRHINKVEIVSDSSESFAHKNNEK 492
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 29.9 bits (64), Expect = 0.75
Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 9/146 (6%)
Query: 143 KETEQKGPVY-ELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTP-DIVIALSTNND 200
+ + K PVY + S + +HE + ++++ P K++V D S N+
Sbjct: 103 RSSRAKRPVYRDFSYTEIDEHEIPIPKKRKSKPAPKQKKSVASDDEDAYDKRHRFSINSA 162
Query: 201 EKEPKRDIERRKRVHEIPDEERN-----EPENQDVEELPASTDKPLGNSDEAYNSNTDAM 255
R R + + E+ E E ++VEE +P+ + + DA
Sbjct: 163 SGTEIRTSLRSSKGKSVNYNEQEFYDDFEDEEEEVEEQVEEEYEPIIDFVLNHRKRADAQ 222
Query: 256 TKKPKTKIQNQVTWTEIP--PNQWTE 279
PK+ Q + W E+ N W +
Sbjct: 223 DDDPKSSYQYLIKWQEVSHLHNTWED 248
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 29.5 bits (63), Expect = 1.00
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 206 RDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQN 265
R+ R KR+HE+ +EE E ++ E+ P L A +S+ K+P N
Sbjct: 1294 RESYRTKRLHELDEEE----EIENAEQSPDWASSTLQVPFNASSSSLATPKKEPLRLDTN 1349
Query: 266 QVTWTEIPPNQWT 278
+T T P +T
Sbjct: 1350 SLTLTSSMPRSFT 1362
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.5 bits (63), Expect = 1.00
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 155 SEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRV 214
SE ++ + S +E + E S+ + D S+ + +
Sbjct: 225 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSS 284
Query: 215 HEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMT 256
+ D E +E ++D + +S+D +S E NSNTD T
Sbjct: 285 SDSSDSE-SESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTT 325
>SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 373
Score = 29.5 bits (63), Expect = 1.00
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 175 DPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPEN-QDVEEL 233
+PN KE + S A S ++E +++K+V + + ++ +N D +++
Sbjct: 254 NPNLKELIASSRKVVTKETASSKRKSDEESLPSQKKQKKVEVAKESKDSKQQNVSDKKQV 313
Query: 234 PA-STDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTEIPPNQWT 278
K L + A +N D +K K K +V+ + + N T
Sbjct: 314 TVKEVPKKLSVKNAAKTTNRDEDSKGKKAKASPKVSQSSLKANGTT 359
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 1.3
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 2/121 (1%)
Query: 119 LPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNC 178
+P S KM P G S L E++ +Q+ EQ+ S E+ +
Sbjct: 499 IPPTTQSIPLKMAGFPGGVNSSLTDIKEEEAVSENAPQQEERSFEQIKTSIHIAPENISA 558
Query: 179 KEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTD 238
E +S P P A + D + + E PDE +EP ++ EE+ +
Sbjct: 559 IEES-KSVPLPTS-FATTIPGSTSAALDDQQTTEAPFEEPDEPAHEPTEEEQEEMRKLEE 616
Query: 239 K 239
K
Sbjct: 617 K 617
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.7 bits (61), Expect = 1.7
Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 154 LSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKR 213
+ E++ E+ +R K++++ + K A A D LS + +E E +++K+
Sbjct: 98 VEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMD---DLSLDEEESESSEKSKKKKK 154
Query: 214 VHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTE 271
+ D+ ++ D+E K + + D T+K + K + + E
Sbjct: 155 KSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARKLASMLE 212
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 168 SEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPEN 227
+EK+T + K + S P P ++A ST + +++P + R + V++ D+ R +
Sbjct: 22 TEKKTAASRDKKRS--DSPPVPRELVAQSTTSRKRDPNQPTPRERTVNKKADQPRRRRQA 79
Query: 228 QDVEELPASTDKPLGNSDEAY 248
E A K ++ A+
Sbjct: 80 PQGNEAFAREGKEARANNAAH 100
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 201 EKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPK 260
EKE KRD ++K++ +EER E + + E A +EA + K+ +
Sbjct: 593 EKEKKRD--KKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQ 650
Query: 261 TKIQNQV 267
K Q ++
Sbjct: 651 EKKQQEL 657
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 200 DEKEPKRDIERRKRVHEIPDE-ERNEPENQDVEELP----ASTDKPLGNSDEAYNSNTDA 254
DE + + D E+ + + + D E N ++D+++ A D+ + N +
Sbjct: 4114 DENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEKMNEDGFEENVQENE 4173
Query: 255 MTKKPKTKIQNQVTWTEIPPNQWTERDPSMDA 286
+ + K ++ E+P +Q + P MDA
Sbjct: 4174 ESTEDGVKSDEELEQGEVPEDQAIDNHPKMDA 4205
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 173 TEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEE 232
T P+ KE++ + AP +T N +E K+ +R ++ E +E NQD
Sbjct: 55 TAAPSEKESLEKQAPARKTKGKRATENGTEEGKKPAKRTRKRKEDGEEGGKRKRNQDPAN 114
Query: 233 LPASTDKPL 241
P +KP+
Sbjct: 115 NP--LNKPM 121
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 150 PVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKR 206
P+ + ++P+ QVL E D + E ++ + DI++ T++ K+ KR
Sbjct: 550 PLKQQPPSNSPEDSQVLTDEINEVNDFSSSERIVINLDEYDIIVDSKTSSHNKQLKR 606
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 10/65 (15%)
Query: 201 EKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPK 260
E++ + E +HE ++ N+P+N P + + GN+ +++ D+ T+KPK
Sbjct: 1263 EEQARWRQEELSNLHETHEKSENDPKN------PKAGSQGSGNT----SASEDSKTEKPK 1312
Query: 261 TKIQN 265
T+ N
Sbjct: 1313 TRTNN 1317
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 3.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 197 TNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAY-NSNTDAM 255
+++ EKE ++ +R R H +EE P Q P ST L ++ N D +
Sbjct: 731 SHDREKEKEKKKDREHRKHRETEEEDEGPPPQPAR--PESTRPALAPPSSSHSNDKYDVI 788
Query: 256 TKKPK 260
++PK
Sbjct: 789 QERPK 793
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 202 KEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKT 261
K+ K +RRKR+ E+ E NE + D LP NSD + ++ ++ K
Sbjct: 292 KKKKSKSDRRKRLVELDAENENENDPSDF-VLPNGQ----SNSDLSVEQDSAIFKEQKKM 346
Query: 262 KIQNQV 267
KIQ ++
Sbjct: 347 KIQKRM 352
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 116 WETLPAAPWSHMYKMKKPPPGDTSF 140
WE L A W H+Y + P DT+F
Sbjct: 122 WEALKAF-WKHLYSLLLKDPNDTTF 145
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 4.0
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 174 EDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEEL 233
E+ +E + AP+P IA + +E P ++E +R E+ EP+N V
Sbjct: 16 ENEEDEEELFPQAPSP--TIAQVPSFEEVIPDEELEDVERAEEMALSHL-EPQNAVV--- 69
Query: 234 PASTDKPL-GNSDEAYNSNTDAMTKKPKTKIQNQ 266
DK +++E Y SN D M ++ T+ +Q
Sbjct: 70 -LHEDKQYYPSAEEVYGSNVDIMVQEQDTQPLSQ 102
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 198 NNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEE 232
NND+KE + ++E + + +EE + E+ + +E
Sbjct: 90 NNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDE 124
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 167 RSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPE 226
+ EK+ T P E V P P+ E+ PK + E + E +EE E E
Sbjct: 88 KEEKKETIQP--PEEVKTEPPQPEEKEGKEAKEPEEPPKEEAEEPQEGGEEEEEEEEEEE 145
Query: 227 NQD 229
D
Sbjct: 146 ITD 148
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 27.1 bits (57), Expect = 5.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 186 APTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQD--VEE--LPASTDKPL 241
+P D AL N E P ++ + RV IP EE+ E ++ ++E +P D+P
Sbjct: 182 SPVYDTTAALE--NIETLPSKEDAQHARVAHIPIEEKQEDSEKEGNIKEAFVPPKFDQP- 238
Query: 242 GNSDEAYNSNTDAMTKKP 259
D A + ++++ KP
Sbjct: 239 -ERDAATSEYLESLSIKP 255
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 203 EPKRDIERRKRVHEIPDEERNEPENQD-VEELPASTDKPLGN 243
E + DI+ + E+ DE NE ++Q+ ++++PA + + N
Sbjct: 15 EQQTDIDSECEITEVDDENVNENKSQEMIQDIPARDREEIEN 56
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.1 bits (57), Expect = 5.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 235 ASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTEIPPNQWTERDPSM 284
A +PL N YN +T K+P + N V ++ PN T D S+
Sbjct: 1022 APIPRPLPNLPMEYNDHTLPSPKEPSNQASNLVRSSDKFPNLLTNLDYSI 1071
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 193 IALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELP 234
+ +S ++E++ K ++E++ D+ERNE + ++ E LP
Sbjct: 672 VEISKPSEEEDKKEEVEKKDG-----DKERNEEKKEEKETLP 708
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.1 bits (57), Expect = 5.3
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 190 DIVIALSTNNDEKEPKRDIERRKRVHEIPDEERN-EPENQDVEELPA-STDKPLGNSDEA 247
DI+I + + K+ +R+ E+RKR E +EE N + + +L A STD L S
Sbjct: 425 DIIIFVDPFEEWKKDEREKEKRKRQEE--EEENNLDRTSWTGRDLSASSTDHSLNASVGK 482
Query: 248 YNSNTDAMTKKPKTKIQN 265
Y ++ +K T N
Sbjct: 483 YLKKEVSLEEKTFTSTVN 500
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 119 LPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNC 178
+P P H ++P T K+ E + + P E + ++TT P
Sbjct: 426 IPKLPPKH--PSRQPTVRATPSTGKQIEPPNDEPSIGNELLPLFESLRFENRKTTSKPKA 483
Query: 179 KEAVLRSAPT 188
K+ ++ S PT
Sbjct: 484 KKTLVTSIPT 493
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 209 ERRKRVHEIPDEERNEPENQDVEELPASTDKP--LGNSDEAYNSNTD 253
E++KR + + ++ P+ + + LPA + P L NS N+N D
Sbjct: 167 EQKKREANVFSDTQSAPQLKSGKALPADFENPYNLSNSKPVNNNNED 213
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 194 ALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTD 253
A+ + NDE+E + R E +E+ N+ + Q EE + DE N
Sbjct: 223 AIQSGNDEEEIFSWGDERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDLES 282
Query: 254 AMTK 257
A++K
Sbjct: 283 AVSK 286
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 26.6 bits (56), Expect = 7.0
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 152 YELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDI-ER 210
+++ P +QV +R + E + P A S + KE + E+
Sbjct: 476 FDIDYATIPYRDQVREQARRRRLEVEKTEPKKLARPAKIKNEAWSKQKEVKEKRNTRREK 535
Query: 211 RKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTK 257
RK E ++NE N +E+ + +D+ + +DA+++
Sbjct: 536 RKSKKEFLKAQKNEASNNLKQEIVSKAGAQETENDDLIDEESDALSE 582
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 218 PDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTK 262
P + NE E+ E LP STDK ++ + N + + K + K
Sbjct: 71 PKKTHNEDESHTNESLP-STDKKKKKDNDDFKQNLKSSSNKTEEK 114
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 26.6 bits (56), Expect = 7.0
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 12/109 (11%)
Query: 183 LRS-APTPDIVIALSTNNDEKEPKRDIERRKRVH--------EIPDEERNEPENQDVEEL 233
LRS +P+P + S NDE+ +R + R R PD +R P+
Sbjct: 113 LRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKRNHRSPS 172
Query: 234 PAS---TDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTEIPPNQWTE 279
P S P+ N E N D + K +V P + E
Sbjct: 173 PVSFAPQKSPVENETETNVDNGDTKISESNEKSGTEVEQQSAPNSNGNE 221
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 26.6 bits (56), Expect = 7.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 180 EAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDK 239
E V R + PD V S E+EP + + RV + DE + PE + E+ DK
Sbjct: 7 ETVSRVSSNPDEVKGSSVV--EEEPDSESTIKSRVSDEIDEHDSIPEQSNTEKSIEINDK 64
Query: 240 PL 241
L
Sbjct: 65 NL 66
>SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 26.6 bits (56), Expect = 7.0
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 195 LSTNNDEKEPK----RDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNS 250
LS + + +PK RDI + R H I + + + AS + LG +EA S
Sbjct: 129 LSVEDGDPDPKKQLVRDILEKARQHTISPLDEQDSGPSSLASSWASVGQRLGTENEASGS 188
Query: 251 NTDAMTKKP 259
T P
Sbjct: 189 TTPVTQSGP 197
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 26.2 bits (55), Expect = 9.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 223 NEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQ 266
NE +NQ++ E PA ++K + DE T+ + K K N+
Sbjct: 30 NELKNQNLFESPAESEKRVKVLDELQQITTEFVKKVSLAKHMNE 73
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 166 LRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPK 205
+R K+ TE N V++ +PTP I + +T P+
Sbjct: 766 MRKTKKQTELTNSAH-VIKPSPTPQITVKQNTTKSSSAPR 804
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 9.3
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 208 IERRKRVHEIPDEERNEPENQDVEELP-ASTDKPL 241
+ R + +H P+ E N+ EN+++++ A +KP+
Sbjct: 433 LRRLRDIHHPPEHEENDKENREIQKNHIAPRNKPI 467
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 9.3
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 131 KKPPPGDTSFLNKETEQKGPVY-ELSEQDAPKHEQVLR-SEKRTTEDPNCKEAVLRSAPT 188
+KPP + K E G + + D +H + ++K E C+ RS +
Sbjct: 14 EKPPETVVRCVCKSQEDIGDTWVQCDGCDCWQHASCVGLADKDIPESYYCEVCHSRSDVS 73
Query: 189 PDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAY 248
+ S N DE+ D+ +E +EE N + E + + L +S+ A
Sbjct: 74 SQV--QNSPNKDEEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESGAELESSEPAS 131
Query: 249 NSNTDAMTKK 258
++ MT +
Sbjct: 132 TNSNVGMTTR 141
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 198 NNDEKEPKRDIERRKRVHEIPDEERNEPENQ 228
NN+E+ + I RKR+H+IP + +P +Q
Sbjct: 705 NNEERPVHKFI--RKRLHQIPVSNKVQPRDQ 733
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.130 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,050,532
Number of Sequences: 5004
Number of extensions: 88863
Number of successful extensions: 281
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 263
Number of HSP's gapped (non-prelim): 45
length of query: 447
length of database: 2,362,478
effective HSP length: 75
effective length of query: 372
effective length of database: 1,987,178
effective search space: 739230216
effective search space used: 739230216
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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