GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001377-TA|BGIBMGA001377-PA|undefined
         (447 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    30   0.15 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.26 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   1.4  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    26   2.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   2.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.1  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    25   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   9.6  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 29.9 bits (64), Expect = 0.15
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 189  PDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAY 248
            P +V + S+   E       ERR++V       ++ P+ ++V EL   T      S++ Y
Sbjct: 1089 PSLVFSASSEATEGRESAHPERREQVRPQRRIRQHMPQQKEVVELSDVTQYATAISEDVY 1148

Query: 249  NSN 251
            +SN
Sbjct: 1149 SSN 1151


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 29.1 bits (62), Expect = 0.26
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 230  VEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTEIPPNQWTERD 281
            V+  P   +K  G  ++A NS+T A TKK        VT  E  P Q + RD
Sbjct: 1242 VKVAPGDNEKRFGWYEQATNSSTGATTKKSFAADGTDVTVRE-KPKQESNRD 1292


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 4/28 (14%)

Query: 93  CCTRLRC----LVVVRGEVWTRVLGQPW 116
           CCT  RC     V   GEV TR +G+ W
Sbjct: 109 CCTLQRCDNFCEVYANGEVTTRSVGEKW 136


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 137 DTSFLNKETEQKGPVYELSEQD 158
           D S  NKET ++G V+E +E D
Sbjct: 162 DASITNKETMRRGTVHEPAELD 183


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 205  KRDIERRKRVHEIPDEERNEPENQDVEEL 233
            +R  +R+ R H +PD ++N       EEL
Sbjct: 1161 RRQAQRQARAHMLPDRQQNGRAVSSAEEL 1189


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 3.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 201 EKEPKRDIERRKRVHEIPDEERNEPENQDVE 231
           +KE K++++  +   E  +EE+ E E++D E
Sbjct: 954 QKEVKKEVDAAEDDEEEEEEEQEEEEDEDEE 984


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.6 bits (51), Expect = 5.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 363 LKKPSPDGDHYKRGSGEGHDP 383
           LK+P  DGDHY+   G   +P
Sbjct: 137 LKEPFTDGDHYQVRYGRPLEP 157


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 9.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 213  RVHEIPDEERNEPENQDVEE 232
            ++HEIP+E   EP  +  EE
Sbjct: 1039 KLHEIPEEPPQEPLKEYTEE 1058


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.130    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,168
Number of Sequences: 2123
Number of extensions: 19786
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 8
length of query: 447
length of database: 516,269
effective HSP length: 66
effective length of query: 381
effective length of database: 376,151
effective search space: 143313531
effective search space used: 143313531
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 49 (23.8 bits)