Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001377-TA|BGIBMGA001377-PA|undefined
(447 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 38 0.014
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 38 0.014
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 38 0.014
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 38 0.014
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 37 0.024
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 36 0.041
At3g28770.1 68416.m03591 expressed protein 35 0.13
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 33 0.29
At2g12875.1 68415.m01402 hypothetical protein 33 0.29
At1g77030.1 68414.m08970 glycine-rich protein 33 0.39
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 33 0.51
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 33 0.51
At2g38440.1 68415.m04721 expressed protein 32 0.67
At1g67840.2 68414.m07743 ATP-binding region, ATPase-like domain-... 32 0.67
At1g67840.1 68414.m07744 ATP-binding region, ATPase-like domain-... 32 0.67
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 32 0.89
At4g32630.1 68417.m04645 hypothetical protein 32 0.89
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 31 1.2
At4g11870.1 68417.m01888 hypothetical protein 31 1.2
At3g14670.1 68416.m01856 hypothetical protein 31 1.6
At2g22080.1 68415.m02622 expressed protein 31 1.6
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 31 2.1
At1g77840.1 68414.m09070 eukaryotic translation initiation facto... 31 2.1
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 31 2.1
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 30 2.7
At3g02120.1 68416.m00178 hydroxyproline-rich glycoprotein family... 30 2.7
At2g37500.1 68415.m04599 arginine biosynthesis protein ArgJ fami... 30 2.7
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 30 2.7
At5g34910.1 68418.m04116 hypothetical protein 30 3.6
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 30 3.6
At4g27950.1 68417.m04010 AP2 domain-containing transcription fac... 30 3.6
At4g26630.1 68417.m03837 expressed protein 30 3.6
At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)... 30 3.6
At5g66310.1 68418.m08360 kinesin motor family protein contains P... 29 4.7
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 29 4.7
At5g27160.1 68418.m03241 hypothetical protein contains Pfam prof... 29 4.7
At5g14440.1 68418.m01690 surfeit locus 2 protein-related / SURF2... 29 4.7
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 29 6.3
At2g36330.1 68415.m04459 integral membrane protein, putative con... 29 6.3
At1g23390.1 68414.m02928 kelch repeat-containing F-box family pr... 29 6.3
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 29 8.3
At3g13210.1 68416.m01653 crooked neck protein, putative / cell c... 29 8.3
At2g22795.1 68415.m02704 expressed protein 29 8.3
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 29 8.3
At1g19990.1 68414.m02504 expressed protein ; expression supporte... 29 8.3
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 185 SAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPD-EERNEPENQDVEELPASTDKPLGN 243
S T D+ ++ N+ K+ + E +KRV E +E EPE+ + E++ + KP
Sbjct: 425 SKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDA 484
Query: 244 SDEAYNSNTDAMTKKPKTKIQNQ 266
S+E + T K +T I+ +
Sbjct: 485 SEETNEMEAEQKTPKLETAIEER 507
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 185 SAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPD-EERNEPENQDVEELPASTDKPLGN 243
S T D+ ++ N+ K+ + E +KRV E +E EPE+ + E++ + KP
Sbjct: 425 SKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDA 484
Query: 244 SDEAYNSNTDAMTKKPKTKIQNQ 266
S+E + T K +T I+ +
Sbjct: 485 SEETNEMEAEQKTPKLETAIEER 507
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 185 SAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPD-EERNEPENQDVEELPASTDKPLGN 243
S T D+ ++ N+ K+ + E +KRV E +E EPE+ + E++ + KP
Sbjct: 425 SKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDA 484
Query: 244 SDEAYNSNTDAMTKKPKTKIQNQ 266
S+E + T K +T I+ +
Sbjct: 485 SEETNEMEAEQKTPKLETAIEER 507
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 37.9 bits (84), Expect = 0.014
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 185 SAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPD-EERNEPENQDVEELPASTDKPLGN 243
S T D+ ++ N+ K+ + E +KRV E +E EPE+ + E++ + KP
Sbjct: 425 SKDTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDA 484
Query: 244 SDEAYNSNTDAMTKKPKTKIQNQ 266
S+E + T K +T I+ +
Sbjct: 485 SEETNEMEAEQKTPKLETAIEER 507
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 37.1 bits (82), Expect = 0.024
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Query: 144 ETEQKGPVYELSEQDA--PKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDE 201
E E+ V E +++A K+E L E+ T + KEA D +A D+
Sbjct: 179 EAEKVENVDEDDKEEALKEKNEAELAEEEETNKGEEVKEANKEDDVEADTKVAEPEVEDK 238
Query: 202 KEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKT 261
K +D K + ++E + + +D +E DK DE SN D KK
Sbjct: 239 KTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDK----EDEKEESNDDKEDKKEDI 294
Query: 262 KIQNQ 266
K N+
Sbjct: 295 KKSNK 299
Score = 32.7 bits (71), Expect = 0.51
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Query: 146 EQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPK 205
++K E++ K E+V + K + + K A D N++KE +
Sbjct: 196 KEKNEAELAEEEETNKGEEVKEANKEDDVEADTKVA---EPEVEDKKTESKDENEDKEEE 252
Query: 206 RDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTK 262
++ E+ + + + DE+ ++ +E S D ++ SN K KT+
Sbjct: 253 KEDEKEESMDDKEDEKEESNDDDKEDEKEESNDDKEDKKEDIKKSNKRGKGKTEKTR 309
Score = 30.7 bits (66), Expect = 2.1
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 132 KPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEK--RTTEDPNCK--EAVLRSAP 187
K G++ +KE E V E ++D + ++ ++K T+D N K + V A
Sbjct: 62 KQHEGESETGDKEVE----VTEEEKKDVGEDKEQPEADKMDEDTDDKNLKADDGVSGVAT 117
Query: 188 TPDIVIALST----NNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGN 243
D V+ S N D + P+ + E+ + ++ + N E D EE DK +
Sbjct: 118 EEDAVMKESVESADNKDAENPEGEQEKESKEEKLEGGKANGNEEGDTEEKLVGGDKG-DD 176
Query: 244 SDEAYN-SNTDAMTKKPKTKIQNQVTWTE 271
DEA N D K+ K +N+ E
Sbjct: 177 VDEAEKVENVDEDDKEEALKEKNEAELAE 205
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 36.3 bits (80), Expect = 0.041
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 5/154 (3%)
Query: 120 PAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCK 179
P P K+P P + +TEQ P E +Q++PK E + + + +
Sbjct: 450 PETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQ 509
Query: 180 EAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDK 239
E+ + P P+ S + +P+ + + E P E + +E P +
Sbjct: 510 ESSKQEPPKPE----ESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEES 565
Query: 240 PLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTEIP 273
P + + + KP+ Q Q TE P
Sbjct: 566 PKPQPPKQETPKPEE-SPKPQPPKQEQPPKTEAP 598
Score = 32.7 bits (71), Expect = 0.51
Identities = 31/159 (19%), Positives = 64/159 (40%), Gaps = 4/159 (2%)
Query: 129 KMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPT 188
K ++P P + ++ + K P E +Q++PK EQ + ++ +EA P
Sbjct: 442 KPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPK 501
Query: 189 PDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAY 248
P ++ ++ PK + + + + + +P Q+ + P + KP E
Sbjct: 502 PKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPK-PEESPKPQPPKQETP 560
Query: 249 NSNTDAMTKKPKTKI-QNQVTWTEIPPNQWTERDPSMDA 286
+ PK + + + + PP Q E+ P +A
Sbjct: 561 KPEESPKPQPPKQETPKPEESPKPQPPKQ--EQPPKTEA 597
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 34.7 bits (76), Expect = 0.13
Identities = 28/144 (19%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 143 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEK 202
KE E+K E+ + K+E + +K + + KE ++ + L N +++
Sbjct: 1157 KENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEK----KLKKNEEDR 1212
Query: 203 EPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTK 262
+ + +E K+ E +E+N+P++ +T K G E+ S + + K++
Sbjct: 1213 KKQTSVEENKKQKE-TKKEKNKPKDD-----KKNTTKQSGGKKESMESESKEAENQQKSQ 1266
Query: 263 IQNQVTWTEIPPNQWTERDPSMDA 286
Q E + D D+
Sbjct: 1267 ATTQADSDESKNEILMQADSQADS 1290
Score = 30.3 bits (65), Expect = 2.7
Identities = 25/136 (18%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 131 KKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPD 190
+K D++ N+E ++ ++++A K ++ + +KR +D +++ + D
Sbjct: 998 EKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRD 1057
Query: 191 IVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNS 250
L E+E K E+++ + ++ ++ E++D + + DK E S
Sbjct: 1058 ----LKAKKKEEETK---EKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKS 1110
Query: 251 NTDAMTKKPKTKIQNQ 266
KK K+++Q
Sbjct: 1111 RKKEEDKKDMEKLEDQ 1126
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 33.5 bits (73), Expect = 0.29
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 137 DTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALS 196
+TS +K+ + + + D ++ + T+ + K VL+S + +A
Sbjct: 196 ETSKASKKPKMSSKLTKRKHTDDQDEDEEAGDDIDTSSE-EAKPKVLKSCNSNADEVA-E 253
Query: 197 TNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTD 253
++DE EPK + + DEE NE + + E P + NSD N+++D
Sbjct: 254 NSSDEDEPKVLKTNNSKADKDEDEEENETSDDEAE--PKALKLSNSNSDNGENNSSD 308
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 33.5 bits (73), Expect = 0.29
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 142 NKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIA-LSTNND 200
N + E+ +E+ + E + + E +E +L P + V S N+
Sbjct: 145 NDDGEESSNDSTTTEEPSSTEEPSSSEQNKAIEGGGTEEPILALTPVLEAVEEEKSYKNE 204
Query: 201 EKEPKRDIERRKRVHEIPDEERNEPENQDVEE 232
E++ ++D E + E +EE+ E E ++ +E
Sbjct: 205 EEKSEKDEEEKSEEEESEEEEKEEEEKEEEKE 236
>At1g77030.1 68414.m08970 glycine-rich protein
Length = 349
Score = 33.1 bits (72), Expect = 0.39
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 359 NYDELKKPSPDGDHYKRGSGEGHDPGRVRTRNVPNAARIGFAITTTDIVLKPTSVFSPVA 418
++ ++ + S D D R SG G G+ R +VPN A + I D V K +
Sbjct: 139 SHKKVSRDSGDADETTRMSGRGGRDGKRRQGSVPN-AHVRSEIKDLDQVRKERQQKANKV 197
Query: 419 GRTPRKTGGGAARGG 433
K GG RGG
Sbjct: 198 SYLQSKRGGRGGRGG 212
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 32.7 bits (71), Expect = 0.51
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 155 SEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRV 214
+++ AP + K T P KE P + N +E+E + + + +
Sbjct: 40 TKETAPTITKETAPTKETA--PATKETAPTRTEEPSLTEQDPENVEEEESEEEEKEEEEK 97
Query: 215 HEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKP 259
E +EE E E ++ EE ++ +G +E+ + +T ++ K+P
Sbjct: 98 EEEEEEEGEEEEEEEEEEEEKEEEENVG-GEESSDDSTRSLGKRP 141
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 32.7 bits (71), Expect = 0.51
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 144 ETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLR--SAPTPDIVIALSTNND- 200
+TE K E A E+ + EK E+P+ E SA +P+ V+ + ++D
Sbjct: 443 DTEPKKETEEDVSSPADIIEKAITEEKHVVEEPSKDEKTSESGSALSPEKVVPTNQDSDT 502
Query: 201 --EKEPKRDIERRKRVHE--IPDEER--NEPENQDVEELPASTD--KPLGNSDEAYNSNT 252
+KE + D+ V E I DE+ EP + E + + D L DE +T
Sbjct: 503 EPKKETEGDVPSPADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKDT 562
Query: 253 DAMTKKPKTKIQNQVTWTE 271
D + K++ + T TE
Sbjct: 563 DTPVAEGKSEETLKETDTE 581
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 32.3 bits (70), Expect = 0.67
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 200 DEKEPKRDIERRKRVHEIPDEERN-EPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKK 258
++ P+ +I+ K E+ E + EP+N+DVE + +++ KP + D+ N D TK
Sbjct: 899 EDNNPESEIKMHKSPLEVSSEGLSTEPDNKDVESIESTSPKP--SLDQ---RNRDTETKS 953
Query: 259 PKTKI 263
P I
Sbjct: 954 PGESI 958
>At1g67840.2 68414.m07743 ATP-binding region, ATPase-like
domain-containing protein contains Pfam profile PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein; similar to ESTs gb|AI995396.1,
dbj|AV557393.1, and dbj|AV557055.1
Length = 445
Score = 32.3 bits (70), Expect = 0.67
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 214 VHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTE 271
V E+P E E E ++ EE P ++ L + +EAY A TK P+ K+ + +TE
Sbjct: 218 VAELPVEAEEEEEEEE-EEKPHGVNQFL-SPEEAYALPASANTKSPRVKLPSVKVFTE 273
>At1g67840.1 68414.m07744 ATP-binding region, ATPase-like
domain-containing protein contains Pfam profile PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein; similar to ESTs gb|AI995396.1,
dbj|AV557393.1, and dbj|AV557055.1
Length = 611
Score = 32.3 bits (70), Expect = 0.67
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 214 VHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTE 271
V E+P E E E ++ EE P ++ L + +EAY A TK P+ K+ + +TE
Sbjct: 218 VAELPVEAEEEEEEEE-EEKPHGVNQFL-SPEEAYALPASANTKSPRVKLPSVKVFTE 273
>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile PF01301
: Glycosyl hydrolases family 35
Length = 988
Score = 31.9 bits (69), Expect = 0.89
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 189 PDIV--IALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDE 246
P+IV +A+ ++KE K+D +++K E DEE + E+ D EE DK ++ +
Sbjct: 755 PEIVKTLAVQVKCEKKEGKQDEKKKK---EDKDEEEEDDEDDDEEE--EEEDKENKDTKD 809
Query: 247 AYNSNTDAM 255
N N D +
Sbjct: 810 MENKNQDIL 818
>At4g32630.1 68417.m04645 hypothetical protein
Length = 531
Score = 31.9 bits (69), Expect = 0.89
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 150 PVYELSEQDAPKHEQVLRSEKRTTED--PNCKEAVLRSAPTPDIVIALSTNNDEKEPKRD 207
PV ELS++ K+ + + +TTE+ PN EA+L + P +V TNN E D
Sbjct: 275 PVSELSDEGIIKNSSEIPASLKTTEEPAPNSLEALLFGSSVPSVV--PGTNNYELWNTSD 332
Query: 208 I 208
I
Sbjct: 333 I 333
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 31.5 bits (68), Expect = 1.2
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 12/138 (8%)
Query: 129 KMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRS--EKRTTEDPNCKEAVLRSA 186
K KK +ET+++ E+ K E +S E+ T ++P+ R
Sbjct: 733 KRKKSESKKEGGEGEETQKEANESTKKERKRKKSESKKQSDGEEETQKEPSESTKKERKR 792
Query: 187 PTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDE 246
P+ +E+ K +E K+ + +R +P++ D EE+P T+KP ++
Sbjct: 793 KNPESKKKAEAVEEEETRKESVESTKK-----ERKRKKPKH-DEEEVPNETEKP----EK 842
Query: 247 AYNSNTDAMTKKPKTKIQ 264
+ +KK +T+ +
Sbjct: 843 KKKKKREGKSKKKETETE 860
>At4g11870.1 68417.m01888 hypothetical protein
Length = 74
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 367 SPDGDHYKRGSGEGHDPGRVRTRNVPNAARIGFAITT-TDIVLKPTSVFSPVAGRTP 422
S DG + GSG+G D G V + AIT+ T V PT +PV TP
Sbjct: 15 SGDGGDFGDGSGDGGDSGATVIPAVTPTTTVVPAITSATTTVTAPTMAVTPVTMGTP 71
>At3g14670.1 68416.m01856 hypothetical protein
Length = 232
Score = 31.1 bits (67), Expect = 1.6
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 5/117 (4%)
Query: 131 KKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPD 190
++PPPG P E A K V+ E R E+ + +
Sbjct: 14 EEPPPGTKPIDAVTKATTEPPMTTEEPSASKQNPVV-IEGRGVEEEQIPTIITTVVEEGE 72
Query: 191 IVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEA 247
S NN+E+ ++D + E +EE+ E E ++ E+ G+SD++
Sbjct: 73 ----KSDNNEEENSEKDEKEESEEEESEEEEKEEEEKEEEEKEEEGNVAGGGSSDDS 125
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 169 EKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEP---KRDIERRKRVHEIPDEERNEP 225
E+ + +D KE PD+ N+DE E D + ++ DEE +E
Sbjct: 79 EEGSADDAEGKETKKGPVSDPDLNGEAGDNDDEPEGDDGNDDEDDDNHENDDEDEEEDED 138
Query: 226 ENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTK 262
EN D E D + +E + + + + PK +
Sbjct: 139 ENDDGGEEDDDEDAEVEEEEEEEDEDDEEALQPPKKR 175
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 132 KPPPGDTSFLNKETEQKGPVYE---LSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPT 188
KP NK+ ++G + E +++Q KH SE + D + + P
Sbjct: 809 KPTSPGVLVTNKDDAERGVINEPVGITDQGKIKHGTRSDSETESCSDSDDDHEKEKHNPV 868
Query: 189 PDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEE 232
D S ND+K +R HE+ +++ + + D ++
Sbjct: 869 SDSDTEGSDMNDDKGSLSSDPDTERSHEVDGDQKKQVDTMDEDD 912
>At1g77840.1 68414.m09070 eukaryotic translation initiation factor
5, putative / eIF-5, putative similar to SP|P55876
Eukaryotic translation initiation factor 5 (eIF-5) {Zea
mays}; contains Pfam profiles PF02020:
eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in
IF2B/IF5
Length = 437
Score = 30.7 bits (66), Expect = 2.1
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 8/148 (5%)
Query: 130 MKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQ-VLRSEKRTTEDPNCKEAVLRSAPT 188
+K PP +K+ +K L E + EQ L+++K+ N K++ +
Sbjct: 143 LKNPPEQKKVSKDKKAMRKAEKERLKEGELADEEQRKLKAKKKALS--NGKDSKTSKNHS 200
Query: 189 PDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAY 248
D I+ + + E D + V D R E + +E+L A T + + S
Sbjct: 201 SDEDISPKHDENALEVDEDEDDDDGVEWQTDTSREAAEKRMMEQLSAKTAEMVMLSAMEV 260
Query: 249 NSNTDAMTKKPKTKIQNQVTWTEIPPNQ 276
K PK+K V TE PP Q
Sbjct: 261 EEK-----KAPKSKSNGNVVKTENPPPQ 283
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 30.7 bits (66), Expect = 2.1
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 148 KGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRD 207
K + EL D + E ED E +S T D+ + +DE+E +
Sbjct: 567 KVDLIELVNTDENSGPADVAQENGVEEDDEEDEWDAKSWGTVDLNLK-GDFDDEEEEAQP 625
Query: 208 IERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQN 265
+ +++ I +EPE + PA T KPL + +A DA K T+ ++
Sbjct: 626 VVKKELKDAISKAHDSEPEAEKPTAKPAGTGKPLIAAVKATPEVEDATRTKRATRAKD 683
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 216 EIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPK 260
EI DEE +PE +++ P D P E ++ D M + PK
Sbjct: 258 EIEDEEAEKPEGW-LDDEPEEVDDPEATKPEDWDDEEDGMWEAPK 301
>At3g02120.1 68416.m00178 hydroxyproline-rich glycoprotein family
protein
Length = 126
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 195 LSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLG-NSDEAYNSNTD 253
++T+N E P R R H+ P + E P P+ E Y S TD
Sbjct: 21 ITTSNPESSPPRPFPESSRKHDSPPPRASTNEPMKKIGTPERLRVPIAFKYPERYRSPTD 80
Query: 254 AMTKKPKTK 262
AM P TK
Sbjct: 81 AM-MSPVTK 88
>At2g37500.1 68415.m04599 arginine biosynthesis protein ArgJ family
contains Pfam profile: PF01960 ArgJ family
Length = 468
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 387 RTRNVPNAARIGFAITTTDIVLKPTSVFSPVAGRTPRKTGGGAARG 432
R+ +V A AITTTD+V K +V S V G R GG A+G
Sbjct: 196 RSDSVEEADSAAVAITTTDLVSKSVAVESQVGGIKIRV--GGMAKG 239
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 30.3 bits (65), Expect = 2.7
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 173 TEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDV-- 230
+E+ +E P T++ + KR + E PDE N +V
Sbjct: 143 SEEDELEEEAEEFVPEKKASKKRKTSSKNQSTKRKKCKLDTTEESPDERENTAVVSNVVK 202
Query: 231 -EELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQ 266
++ S D N+DE N +T MTK ++ Q +
Sbjct: 203 KKKKKKSLDVQSANNDEQNNDSTKPMTKSKRSSQQEE 239
>At5g34910.1 68418.m04116 hypothetical protein
Length = 203
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 151 VYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPK 205
++EL EQ+A ++E+ +S+ R K + P++ LST++ E EP+
Sbjct: 108 IFELEEQNAKRNEENHQSQSRIASLE--KLVLFMKEKDPELAAYLSTDSTEPEPE 160
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 29.9 bits (64), Expect = 3.6
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 124 WSHMYKMKKPPPGDTSFLNKETEQKG--PVYELSEQDAPKHEQVLRSEKRTTEDPNCKEA 181
W + + G+ S L E G E+ Q K + L KR E+ KEA
Sbjct: 585 WEQNARKLREALGNESTLEVSVELNGNGKKMEMRSQSETKLNEPL---KRMEEETRIKEA 641
Query: 182 VLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHEIPD-EERNEPENQDVE 231
LR +A+ +EK K +E+ ++ +I + E+ E E + VE
Sbjct: 642 RLREENDRRERVAVEKAENEKRLKAALEQEEKERKIKEAREKAENERRAVE 692
>At4g27950.1 68417.m04010 AP2 domain-containing transcription
factor, putative DNA-binding protein Pti6, Lycopersicon
esculentum, gb:U89257
Length = 335
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 194 ALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTD 253
A +++DE+E + R+RV + +E R EP + ++ AS K + N D
Sbjct: 52 ATDSSSDEEE---FLFPRRRVKRLINEIRVEPSSSSTGDVSASPTK------DRKRINVD 102
Query: 254 AMTKKPKTKIQNQVTWTEIPPNQW 277
+ +KP QNQ + + W
Sbjct: 103 STVQKPSVSGQNQKKYRGVRQRPW 126
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 29.9 bits (64), Expect = 3.6
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 136 GDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIAL 195
GDT+ KE KG + + + S++ +EA T + +L
Sbjct: 463 GDTTVSEKEKSSKGAKRKRTPKKTSPTAGSSSSKRSAKSQKKSEEA------TKVVKKSL 516
Query: 196 STNNDEKEPKRDIERRKRVHEIPD-EERNEPENQ----DVEELPASTDKPLGNSDEAYNS 250
+ ++DE E +++ E ++ + + EE+ E EN+ D E A DE+
Sbjct: 517 AHSDDESEEEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQPSESEEKDESEEH 576
Query: 251 NTDAMTKKPK 260
+ + TKK +
Sbjct: 577 SEEETTKKKR 586
>At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)
identical to cDNA DEAD box RNA helicase, RH28 GI:3776026
Length = 789
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 196 STNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKP---LGNSDEAYNSNT 252
+T+ DEK K I+ R I +EE E E +D + A TDK L DEA
Sbjct: 91 TTSIDEKISKA-IQHRPVPISINEEEEEEEEEEDASD--AETDKQEEYLSEDDEAAEYKP 147
Query: 253 DAMTKKP 259
+ T KP
Sbjct: 148 EDATPKP 154
>At5g66310.1 68418.m08360 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1063
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 149 GPVYELSEQDAPKHEQVLRSEK-RTTEDPNCK---EAVLRSAPTPDIVIALSTNNDEKEP 204
GPV + E K+E V E TE N + E + T ++ N+E+E
Sbjct: 579 GPVENMPESSPDKYEAVTAEEPVSVTEPKNLQHPTEEAVCVTETKNLQHPTEAENEEEEE 638
Query: 205 KRDIERRKRVHEIPDEERNEPENQDVEELPASTDK 239
+ ++ P +E N +N + +L S D+
Sbjct: 639 EERVKEVSGASPEPKQESNLTKNPALCDLECSPDE 673
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 207 DIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQ 266
+ E + + H+ +EE N+ E + +E DK N D+ + ++ K+K +++
Sbjct: 3 ETEEKVKNHDNKEEEHNKAEKAEKKEKKKDKDKKDKNEDDKNGGGEEGEDQEKKSKKKDK 62
Query: 267 VTWTEIPPNQWTERDP 282
E P ++DP
Sbjct: 63 KAKKEKNPED--KKDP 76
>At5g27160.1 68418.m03241 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 702
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 157 QDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRVHE 216
++A + + + +E+ ED NC++ + P+ +S D+ EP + E
Sbjct: 23 READMNREEVAAEENKFEDENCEQEPPENLNEPEEE-KISEEIDDDEPMSS----HGMEE 77
Query: 217 IPDEERNEPENQDVEEL 233
P EE E E ++ EEL
Sbjct: 78 NPQEEEKEREEENPEEL 94
>At5g14440.1 68418.m01690 surfeit locus 2 protein-related / SURF2
protein-related contains weak hit to Pfam profile
PF05477: Surfeit locus protein 2 (SURF2)
Length = 291
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 198 NNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEEL 233
NN +K+ K+ +E++K ++ DE +E + EEL
Sbjct: 150 NNKKKKNKKSVEKKKNGEDVADEIEHENDEAVEEEL 185
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 8/127 (6%)
Query: 155 SEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKEPKRDIERRKRV 214
S + PK E V +K+ A + ++ S ++E K+D +++K+V
Sbjct: 408 SSKGKPKIE-VYNKDKKMGSGGLITPAKTYNTAADSLLGETSAKSEEPSKKKDKKKKKKV 466
Query: 215 HEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTKIQNQVTWTEIPP 274
E EE E + ++ A T+ + + E N K K K + + T TE P
Sbjct: 467 EEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKN------KKKRKHEEEET-TETPA 519
Query: 275 NQWTERD 281
+ +++
Sbjct: 520 KKKDKKE 526
>At2g36330.1 68415.m04459 integral membrane protein, putative
contains 4 transmembrane domains; contains Pfam PF04535
: Domain of unknown function (DUF588); similar to
putative ethylene responsive element binding protein
(GI:22135858) [Arabidopsis thaliana]
Length = 431
Score = 29.1 bits (62), Expect = 6.3
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 115 PWETLPAAPWSHMYKMKKPPPGDTS-----FLNKET---EQKGPVYELS-EQDAPKHEQV 165
P +T+P+ S + K PPP DTS F N T P + L ++ K +
Sbjct: 176 PAKTMPSMSPSSVSTEKSPPPSDTSMAIVAFDNSTTHFSSSPSPPHSLDHSSESEKEDAK 235
Query: 166 LRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEKE 203
+ E R ++P E P+P IV+ + N KE
Sbjct: 236 SKPESRRNKNPGKVE----ETPSP-IVVVHNHNRSVKE 268
>At1g23390.1 68414.m02928 kelch repeat-containing F-box family
protein similar to hypothetical protein GB:AAF27090
GI:6730669 from (Arabidopsis thaliana); contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 394
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 108 WTRVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVY-ELSEQDAP-KHEQV 165
W R + L PW +Y + PP + + + K + EL+ +P +H V
Sbjct: 47 WNRAVFYSLRRLKTMPWLFVYNQRNSPPYTMATMAMAYDPKSEAWIELNTASSPVEHVSV 106
Query: 166 LRSEKRT 172
RS T
Sbjct: 107 ARSSHST 113
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 28.7 bits (61), Expect = 8.3
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 201 EKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPK 260
E+EPK+ ++ K++ + D E E EE P K EA + + K+ +
Sbjct: 83 EEEPKKKKKKNKKLQQRGDTNDEEDEVIAEEEEPKKKKKKQRKDTEAKSEEEEVEDKEEE 142
Query: 261 TKIQ 264
K++
Sbjct: 143 KKLE 146
>At3g13210.1 68416.m01653 crooked neck protein, putative / cell
cycle protein, putative similar to Swiss-Prot:P17886
crooked neck protein [Drosophila melanogaster]
Length = 657
Score = 28.7 bits (61), Expect = 8.3
Identities = 20/77 (25%), Positives = 29/77 (37%)
Query: 193 IALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNT 252
+A N +KE D KR + DE R P N D ++ +GN D
Sbjct: 261 VAFEKQNGDKEGIEDAIIGKRRCQYEDEVRKNPLNYDSWFDFVRLEETVGNKDRIREIYE 320
Query: 253 DAMTKKPKTKIQNQVTW 269
A+ P + Q + W
Sbjct: 321 RAVANVPPPEAQEKRYW 337
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 8.3
Identities = 23/124 (18%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 143 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPDIVIALSTNNDEK 202
KETE K E S Q+ K ++ + EK E + +E+ T + +++ E+
Sbjct: 523 KETETKDNE-ESSSQEETKDKENEKIEKE--EASSQEESKENETETKE---KEESSSQEE 576
Query: 203 EPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEAYNSNTDAMTKKPKTK 262
+++ E+ ++ P EE E EN+ +E+ +++ + + ++ + + +
Sbjct: 577 TKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQEN 636
Query: 263 IQNQ 266
+ +
Sbjct: 637 VNTE 640
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/52 (23%), Positives = 30/52 (57%)
Query: 196 STNNDEKEPKRDIERRKRVHEIPDEERNEPENQDVEELPASTDKPLGNSDEA 247
S + +E++P++ ++ K+ E+ +EE++ + ++ S K +SDE+
Sbjct: 42 SKSKEEEKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKSKESKKKHKRSSDES 93
>At1g19990.1 68414.m02504 expressed protein ; expression supported
by MPSS
Length = 251
Score = 28.7 bits (61), Expect = 8.3
Identities = 9/37 (24%), Positives = 23/37 (62%)
Query: 193 IALSTNNDEKEPKRDIERRKRVHEIPDEERNEPENQD 229
++ EKE + +R ++V+++P ++R +P+ +D
Sbjct: 93 VSKENKKPEKEEEVKKKRERKVYDLPGQKREQPDERD 129
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.130 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,999,798
Number of Sequences: 28952
Number of extensions: 486477
Number of successful extensions: 1402
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1334
Number of HSP's gapped (non-prelim): 87
length of query: 447
length of database: 12,070,560
effective HSP length: 83
effective length of query: 364
effective length of database: 9,667,544
effective search space: 3518986016
effective search space used: 3518986016
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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