GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001376-TA|BGIBMGA001376-PA|undefined
         (119 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY424286-1|AAR08374.1|  359|Homo sapiens progestin and adipoQ re...    32   0.40 
AL136125-1|CAC05478.1|  359|Homo sapiens progestin and adipoQ re...    32   0.40 
AF347029-1|AAL79777.2|  354|Homo sapiens transmembrane protein p...    32   0.40 
AF313619-1|AAO47232.1|  222|Homo sapiens putative membrane stero...    32   0.40 
BC020210-1|AAH20210.1|  640|Homo sapiens EF-hand domain (C-termi...    28   8.6  
AL136125-2|CAI20107.1|  640|Homo sapiens protein ( Human DNA seq...    28   8.6  
AL049611-1|CAI19693.1|  640|Homo sapiens protein ( Human DNA seq...    28   8.6  
AK001328-1|BAA91628.1|  640|Homo sapiens protein ( Homo sapiens ...    28   8.6  

>AY424286-1|AAR08374.1|  359|Homo sapiens progestin and adipoQ
           receptor family member VIII protein.
          Length = 359

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 39  TCNGCCVKMVRYSKSPYEVVRRTCTSQLQINLFMVDHVCMMESTGTGHMCFCEE 92
           +C GCC    RY + PY V+R+ C        F++D   +       H+  C+E
Sbjct: 195 SCAGCCYAKYRY-RRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQE 247


>AL136125-1|CAC05478.1|  359|Homo sapiens progestin and adipoQ
           receptor family member VIII protein.
          Length = 359

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 39  TCNGCCVKMVRYSKSPYEVVRRTCTSQLQINLFMVDHVCMMESTGTGHMCFCEE 92
           +C GCC    RY + PY V+R+ C        F++D   +       H+  C+E
Sbjct: 195 SCAGCCYAKYRY-RRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQE 247


>AF347029-1|AAL79777.2|  354|Homo sapiens transmembrane protein
           protein.
          Length = 354

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 39  TCNGCCVKMVRYSKSPYEVVRRTCTSQLQINLFMVDHVCMMESTGTGHMCFCEE 92
           +C GCC    RY + PY V+R+ C        F++D   +       H+  C+E
Sbjct: 190 SCAGCCYAKYRY-RRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQE 242


>AF313619-1|AAO47232.1|  222|Homo sapiens putative membrane steroid
           receptor protein.
          Length = 222

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 39  TCNGCCVKMVRYSKSPYEVVRRTCTSQLQINLFMVDHVCMMESTGTGHMCFCEE 92
           +C GCC    RY + PY V+R+ C        F++D   +       H+  C+E
Sbjct: 58  SCAGCCYAKYRY-RRPYPVMRKICQVVPAGLAFILDISPVAHRVALCHLAGCQE 110


>BC020210-1|AAH20210.1|  640|Homo sapiens EF-hand domain
           (C-terminal) containing 1 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 6   RTIYCYECDSWSDPRCKDPFNYTALPR 32
           RT + Y+CD ++    K+ F  T LPR
Sbjct: 340 RTFFIYDCDPFTRRYYKEKFGITDLPR 366


>AL136125-2|CAI20107.1|  640|Homo sapiens protein ( Human DNA
           sequence from clone RP1-304B14 on chromosome 6. ).
          Length = 640

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 6   RTIYCYECDSWSDPRCKDPFNYTALPR 32
           RT + Y+CD ++    K+ F  T LPR
Sbjct: 340 RTFFIYDCDPFTRRYYKEKFGITDLPR 366


>AL049611-1|CAI19693.1|  640|Homo sapiens protein ( Human DNA
           sequence from clone RP1-180E22 on chromosome
           6p11.2-12.3. ).
          Length = 640

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 6   RTIYCYECDSWSDPRCKDPFNYTALPR 32
           RT + Y+CD ++    K+ F  T LPR
Sbjct: 340 RTFFIYDCDPFTRRYYKEKFGITDLPR 366


>AK001328-1|BAA91628.1|  640|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10466 fis, clone NT2RP1001665. ).
          Length = 640

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 6   RTIYCYECDSWSDPRCKDPFNYTALPR 32
           RT + Y+CD ++    K+ F  T LPR
Sbjct: 340 RTFFIYDCDPFTRRYYKEKFGITDLPR 366


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.136    0.487 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,211,461
Number of Sequences: 224733
Number of extensions: 646708
Number of successful extensions: 1522
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1518
Number of HSP's gapped (non-prelim): 8
length of query: 119
length of database: 73,234,838
effective HSP length: 81
effective length of query: 38
effective length of database: 55,031,465
effective search space: 2091195670
effective search space used: 2091195670
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 59 (27.9 bits)