Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001375-TA|BGIBMGA001375-PA|IPR007087|Zinc finger,
C2H2-type
         (377 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    33   0.005
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    29   0.086
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   1.1  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   5.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   5.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   9.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   9.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   9.9  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
          protein.
          Length = 74

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 5  EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
          EKPF C  P+C   FT + HL+ H + H
Sbjct: 7  EKPFEC--PECHKRFTRDHHLKTHMRLH 32


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 0.086
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 5   EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
           EKP+ C    CG  FT    L++HT+ H
Sbjct: 201 EKPYVCKA--CGKGFTCSKQLKVHTRTH 226


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 101 NTDDLHTPQM--VFPLEHTDSTLFSTTNNQRNI 131
           +T DL  P +  VFP ++ DS +FS    + N+
Sbjct: 138 DTKDLPVPPLTEVFPDKYMDSGIFSRAREEANV 170


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 264 IRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSE 295
           +RL N    R+  V  +  +N+K+ + R+L E
Sbjct: 4   MRLSNVATFRLSKVMLDHTINSKKTIMRILKE 35


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 218 TKNNKITDVPPIMSQTSIDYVVETLTNDLCNDTANKH 254
           TK N +   P   SQTS+ Y      + LC    + H
Sbjct: 353 TKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTH 389


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 11/54 (20%), Positives = 27/54 (50%)

Query: 85  ETKQHILSLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSS 138
           +  Q +  +  I+ ++  + L  P+     + +DST+    N++   ++SR S+
Sbjct: 409 DDNQKLTGIVQISNMTEYNGLTEPKKDNKRKLSDSTMNKINNHEYKRSVSRESN 462


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 13  PDCGMTFTNEDHLQLHTKKHDMMLQLGLEQKAA 45
           PD      ++ H Q+HT+   M  Q G  Q  A
Sbjct: 158 PDSPPLVESQMHHQMHTQHPHMQPQQGQHQSQA 190


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 6/130 (4%)

Query: 84  METKQHILSLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISR----SSSD 139
           M+T   I  ++ +  I   D +HT   +  ++ TD  + S     R   + R      +D
Sbjct: 402 MDTMDRIDRMDRMDRIDRIDRMHTMDTMDTMDRTDK-MSSMDRMDRMDRVDRMDTMDRTD 460

Query: 140 ESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIK-DSISYSNNIIKIH 198
           +  ++   +        + + T+ R+      +R+D     D + + D +S  + + KI 
Sbjct: 461 KMSSMDRMDRMDRVDTMDTMDTMDRMDRMDRMDRMDRMDRMDTMDRTDKMSRIDRMDKID 520

Query: 199 SEIRRDDMNK 208
              R D  N+
Sbjct: 521 RMDRMDRTNR 530


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.128    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,141
Number of Sequences: 429
Number of extensions: 4651
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 377
length of database: 140,377
effective HSP length: 59
effective length of query: 318
effective length of database: 115,066
effective search space: 36590988
effective search space used: 36590988
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)