Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001375-TA|BGIBMGA001375-PA|IPR007087|Zinc finger,
C2H2-type
(377 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 37 0.005
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 36 0.007
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 35 0.022
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.029
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 33 0.066
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 33 0.087
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 33 0.087
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.087
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 33 0.087
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 31 0.20
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 31 0.27
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 30 0.62
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 30 0.62
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 29 0.81
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 29 1.1
SPAC1952.16 |rga9||RhoGAp, GTPase activator towards Rho/Rac/Cdc4... 29 1.1
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.1
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 29 1.4
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 29 1.4
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 29 1.4
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 29 1.4
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 28 1.9
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 28 1.9
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.9
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.9
SPAC23H4.08 |||RNA polymerase II associated protein |Schizosacch... 28 1.9
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 28 2.5
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 27 3.3
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 3.3
SPAC7D4.10 |vma13||V-type ATPase subunit H|Schizosaccharomyces p... 27 3.3
SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex |... 27 3.3
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 4.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 4.3
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.7
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 26 7.6
SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual 26 7.6
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 26 7.6
SPBC13A2.03 |||phosphatidate cytidylyltransferase|Schizosaccharo... 26 7.6
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 36.7 bits (81), Expect = 0.005
Identities = 28/135 (20%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 136 SSSDESGAIKEFETTTIS--KLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNN 193
SS D A + T I + ++VT + E++ D D S + + D + N+
Sbjct: 851 SSLDMVNACEGINQTAIGFVEKPDKVTELIDEAEENIDISQDISMTETNAVDDEVQAENS 910
Query: 194 IIKIH-SEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTNDLC-NDTA 251
I++ E R+DD+ K+ ++ ++ ++ +T + + + D V+ C N T
Sbjct: 911 ILQDEVEETRQDDIEKDELEDIKEVKEDENLTTLEETIEIPANDIEVQDPEQCSCMNSTE 970
Query: 252 NKHDESDNIEVLIRL 266
N + ++N ++++
Sbjct: 971 NDNITTENSSEIVQV 985
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 36.3 bits (80), Expect = 0.007
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 8 FACTMPDCGMTFTNEDHLQLHTKKHD 33
F CT PDC +FT ++HL+ H + H+
Sbjct: 26 FYCTYPDCPKSFTRKEHLRRHERTHE 51
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 34.7 bits (76), Expect = 0.022
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
EKPF C+ P C FT D L H + H
Sbjct: 29 EKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.3 bits (75), Expect = 0.029
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTK 30
EKPF C++P+C +FT D L H +
Sbjct: 103 EKPFICSVPECDRSFTRSDALAKHMR 128
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 33.1 bits (72), Expect = 0.066
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
EKP CT P C F+ D L H + H
Sbjct: 51 EKPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 32.7 bits (71), Expect = 0.087
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 172 NRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDV-PPIM 230
++VD S+L +++ +SY N K ++RR NK F D + D+ P +
Sbjct: 279 HKVDGSELYEDIRNQRVSYCNECGKPPLKLRRVGQNKKEKHYFSDGDSESSEDDLAQPGI 338
Query: 231 SQTSIDYVVETLTNDLCNDTANKHDESDNIEVLI 264
+ I + E L + N + E ++ + I
Sbjct: 339 MKPDITFFGEALPDSFFNKVGSGELEETDLLICI 372
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 32.7 bits (71), Expect = 0.087
Identities = 20/85 (23%), Positives = 43/85 (50%)
Query: 248 NDTANKHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSEKSKTKSPTISNL 307
N A K E + + V + + G+ ++ + ++EPK ++KLK V + + T +N
Sbjct: 190 NAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVFKSNGTVTAANA 249
Query: 308 VPISGGTLIPVTIVAAQPQKIPIPP 332
++ G V + AA+ +++ + P
Sbjct: 250 STLNDGASALVLMSAAKVKELGLKP 274
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 32.7 bits (71), Expect = 0.087
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 62 EEVGLFQDLQNDNPFDEGFKRAMETKQHILSLESIATISNTDDLHTPQMVFPLEHTDSTL 121
EE+ +D N + DE R +E+ + ++ +S+ +S ++ + + L+ + +
Sbjct: 3934 EELANEEDTANQSDLDESEARELESDMNGVTKDSV--VSENENSDSEEENQDLDEEVNDI 3991
Query: 122 FSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKD 181
+N N + ++E E ++ S NE S +V K DDN+ + K +
Sbjct: 3992 PEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNE----SDLVSKEDDNKALEDKDRQ 4047
Query: 182 EVIKDSISYSNNIIKIHSEIRRDDMNKN 209
E K+ ++ + I EI+ D N
Sbjct: 4048 E--KEDEEEMSDDVGIDDEIQPDIQENN 4073
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 32.7 bits (71), Expect = 0.087
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 159 VTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTT 218
++T + + EK ++ + + SK K + ++ + S + K SE D N ++ F++TT
Sbjct: 13 ISTKNALEEKSNETKDETSKRKHDPAEEESAVSTKVSK--SEPLEDKGNAE-VKEFKETT 69
Query: 219 KNNKITDVPPIMSQTSIDYVVETLTNDLCNDTANKHDESD 258
K+N + I T I T + C T K +E +
Sbjct: 70 KSNGVKPEVEITESTKIQKESNT---EPCISTGGKVEEKE 106
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 31.5 bits (68), Expect = 0.20
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 162 ISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRD-----DMNKNPIQTFED 216
I I+ +++ R+ D E D N + I ++I RD D+ P++ ++
Sbjct: 439 IDDIIAEYETGRLFDINAFTEQELDGFEELLNYLYIRAQILRDCDIIIDIYNEPVKISKN 498
Query: 217 TTKNNKITDVPPIMSQTSIDYV 238
N+ T VPP + + +D+V
Sbjct: 499 NGYNSAYTMVPPDLDEICVDFV 520
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 31.1 bits (67), Expect = 0.27
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
E+PF C C F + HL++H + H
Sbjct: 50 ERPFVCDYTGCSKAFYRKSHLKIHKRCH 77
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 6 KPFACTMPDCGMTFTNEDHLQLHTKKH 32
KPF+C C F + HL+ H + H
Sbjct: 81 KPFSCHYDGCDAQFYTQQHLERHIEVH 107
Score = 27.5 bits (58), Expect = 3.3
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 7 PFACTMPDCGMTFTNEDHLQLHTKK-HDMML 36
P+ CT DC + F + LQ H + H+ ++
Sbjct: 143 PYPCTYQDCELRFATKQKLQNHVNRAHEKII 173
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 29.9 bits (64), Expect = 0.62
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 119 STLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSK 178
ST+ ++ NN RN S G+ K F+ S + N+ T R +++ +
Sbjct: 147 STMSTSKNNVRNAERPASKKPVFGSKKYFDVINDSNVENKEETKDRNLDRALSKFTQSRE 206
Query: 179 LKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKIT 224
++ + S N K +++ + ++ + T ED + NN T
Sbjct: 207 KNEQNLSSKASVLRN--KKSILLKKRNQDETQLTTEEDFSANNDST 250
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.9 bits (64), Expect = 0.62
Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 117 TDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDD 176
T T+ S ++ + S+E + ++ ETT K ++ + + +D+
Sbjct: 131 TAGTIISDIMDEPVVDEDDKLSEEDLSKEDLETTL--KGDENYSSSQKEIYDNDETIPKP 188
Query: 177 SKLKDEVIKDSISYSNNII---KIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQT 233
+ E I+ S S N I + + + +D + I TFE +++++ +VP I
Sbjct: 189 PSPEVEKIETSTSVENAYITNSQYNDTLDMEDQTSDLITTFEHENEDHEVHEVPSI---H 245
Query: 234 SIDYVVETLTNDLCNDTANKHDESDNIEVLIRLPNGRQV----RMKSVEDEPKVN 284
++ ET+ +L ++ N+ + +++ VL P Q+ + +ED+P N
Sbjct: 246 GMEGTFETV--NLTSEAGNEKEFNNDSVVLNTTPKEMQISSLDAVDKLEDKPVSN 298
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 29.5 bits (63), Expect = 0.81
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 1 MVEPEKPFACTMPDCGMTFTNEDHLQLH 28
+V +KP+ C +P+C + N++ L+ H
Sbjct: 343 LVVVDKPYKCPVPNCDKAYKNQNGLKYH 370
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 112 FPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTN 157
+P H D + S + ++ +S SD G++KE TTTI K+ N
Sbjct: 797 YPFFHVD--VASAVVDLQHRLLSPQKSDSFGSLKEGGTTTIKKIEN 840
>SPAC1952.16 |rga9||RhoGAp, GTPase activator towards
Rho/Rac/Cdc42-like small GTPases|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 684
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/100 (22%), Positives = 40/100 (40%)
Query: 177 SKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSID 236
S+ DE++ +I NN S + N + + K+NK + +SQ I+
Sbjct: 116 SRRVDEIVSAAIVKINNYNSRFSHVNSKKSNLTDRKPIPTSRKSNKSDSLASALSQLDIN 175
Query: 237 YVVETLTNDLCNDTANKHDESDNIEVLIRLPNGRQVRMKS 276
+ L N + + + VL++L V+ KS
Sbjct: 176 PSNVNKFDGLINIVDHPYTAEEFANVLLKLMKASTVKRKS 215
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 92 SLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTT 151
S +S+ T T H + V T+ T +TT++ N T SSS + A +++
Sbjct: 265 SSKSLTTSKTTASGHITKGVMEALSTNDTT-NTTDDATNTTSDSSSSSSASASSSSSSSS 323
Query: 152 ISKLTNEVTTISRIV 166
+ L ++ IS ++
Sbjct: 324 AASLVSQPVGISAVI 338
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
EKPF C CG F+ D+L+ H + H
Sbjct: 449 EKPFVCI---CGKRFSRRDNLRQHERLH 473
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 257 SDNIEVLIRLPNGRQVRMKSVEDEPKVNAK--EKLKRVLSEKSKTKSPTISNLVPISGGT 314
SDN E + +P QV KS+E+ + K E KS ++P+ +N + G
Sbjct: 58 SDNDESMAEMPLEPQVEPKSIENNYTLKKKNEEGFLSQQENKSSNQNPSKANNLFDKLGV 117
Query: 315 LIPVTIVA 322
P+T +A
Sbjct: 118 SKPITFIA 125
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 28.7 bits (61), Expect = 1.4
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 113 PLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDN 172
PL T+ S+ QR+ T +RSS ++ + +F+ + EVTTI ++ D+
Sbjct: 125 PLVPESFTISSSYPIQRSSTQTRSSFEDDSS--DFDLS-------EVTTIPALLRALQDS 175
Query: 173 RVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKN 209
R+D KL E + ++ ++ K++ + + D+ KN
Sbjct: 176 RIDREKL--EALATFLASASIDEKVYVKNCKKDLLKN 210
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.7 bits (61), Expect = 1.4
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 92 SLESIATISNTDDLHTPQMVFPLEHTDSTLFSTT-NNQRNITISRSSSDESGAIKEFETT 150
S + + + NT D +P+MV + +F+ + + ++S G ++ ++T
Sbjct: 403 STDRVVKLWNTSD-SSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTA 461
Query: 151 TI--------SKLTNEVTTISRIVEKHDDNRVDDSKLKDE 182
T S++T EVT RIV+ D +DS D+
Sbjct: 462 TNPGVRKAFESRVTEEVTKKERIVQLEDRGAGEDSSDDDD 501
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 289 LKRVLSEKSKTKSPTISNLVPISGGTLI-PVTIVAAQPQKIPIPPFRVARNYDKKAVKRK 347
++ V S ++ TK +I++ L P T+V P+++ F VA Y ++ KRK
Sbjct: 424 MRFVSSFEASTKKESINSHSETDDSILRRPRTVVTFIPERLLCKRFNVALPYGQEKQKRK 483
Query: 348 NLDTGNQCHSVSSEKQSDLD 367
N+ + ++ + +D
Sbjct: 484 NISSIENVPIIAEIENKSID 503
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 164 RIVEKHDDNRVDDSKLKDEVIKDS---ISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKN 220
RI H D V S + +S S +N+I+++H ++ N N F+ +N
Sbjct: 634 RISSNHSDTSVK-SNSPSSIFDNSGYLNSLNNSILQMHQNLQNSS-NTNDQYKFDSVQEN 691
Query: 221 NKITDVPPIMSQT 233
++ P++ QT
Sbjct: 692 ELHANITPVLDQT 704
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 28.3 bits (60), Expect = 1.9
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 126 NNQRNITISRSSSDESGAIKEFETTTI---SKLTNEVTTISRIVEKHDDNRVDDSKLKDE 182
+N T SRSS S + T L+N ++++ +DD+ V DS+L ++
Sbjct: 272 SNFSRATSSRSSKTRSVVYEPNHRHTSFFGDTLSNLSSSLNDKKSPNDDHAVLDSELMEQ 331
Query: 183 VIKDS---ISYSNNIIKIHSEIRRDDMNK--NPIQTFEDTTKNNKITDVPPIMSQTSIDY 237
+ DS + +NN+ + DD N+ N + T + +T+ I +
Sbjct: 332 TLPDSAEAVEIANNVKEDIVSTANDDANELDNTSEKATLETSSKPVTE-QAIEQSEVVQE 390
Query: 238 VVETLTNDLCNDTANKHDESDN 259
V E TN N DE N
Sbjct: 391 VEEGDTNMTTNTILKPTDEIIN 412
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 28.3 bits (60), Expect = 1.9
Identities = 62/296 (20%), Positives = 112/296 (37%), Gaps = 32/296 (10%)
Query: 79 GFKRAMETKQHILSLESIATISNTDDLHTPQ--MVFPLEHTDSTLFSTTNNQRNITISRS 136
G +A +TK S+E ATIS D +P VFP++ T+S +T +++ T
Sbjct: 112 GSTKAADTKS---SVE--ATISPLKDTKSPSNASVFPIKPTESKTSTTKDSE---TAKEE 163
Query: 137 SSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKL----KDEVIKDSISYSN 192
S K E TT + T++ D + K E I YS+
Sbjct: 164 DDASSSTTKAVEATTSKASSAHTDTLATSASNSDRGASTPEMVVKAEKREGSTSPIPYSS 223
Query: 193 -NIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTNDL--CND 249
+I + + + ++ + + T + + DV P + ++ V++ D
Sbjct: 224 LSIAERIKQAQNTPFLESKVLPQNNETSDEENVDVKP--AAGTVKNVMQAFLQPATPAKD 281
Query: 250 TANKHDESDN---IEVLIRLPNGRQVRMKSVEDEPKVNAKEKL-----KRVLSEKSKTKS 301
TA+K + + R+ + + E+ V L K + S TK+
Sbjct: 282 TASKEPSKSSQQPVRTKPRIAQSPFLAQDAKENGGNVEVSSPLSFSASKSPAAVDSSTKT 341
Query: 302 PTIS-NLVPISGGTLIPVTIVAAQPQKIPIPPF---RVARNYDKKAVKRKNLDTGN 353
PT N+V T ++++ P + P V + + K V R+ +GN
Sbjct: 342 PTEQVNVVSKQAPTTSSTSVISPDPLQTAAPSANVNEVIASLESKVVTRRT-GSGN 396
>SPAC23H4.08 |||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 328 IPIPPFRVARNYDKKAVKRKNLDTGNQCHSVSSEKQ 363
+P+P RV R + V L+ GN +SVSS K+
Sbjct: 1 MPLPVLRVKRKASEDPVNALYLELGNNPNSVSSTKR 36
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.9 bits (59), Expect = 2.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKHDM 34
E+PF C CG F +++ H + H +
Sbjct: 493 ERPFVCDYAGCGKAFNVRSNMRRHQRIHGL 522
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 57 FIRNCEEVGLFQDLQNDNPFDEGFKRAMETKQHILSLESIATISNTDDL 105
FI + V LFQDL ND D+ T + L + I T N D+
Sbjct: 655 FIASLCAVRLFQDLPNDGDSDDDAISFATTYESFLYMYQILTSENWTDV 703
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 3.3
Identities = 40/215 (18%), Positives = 81/215 (37%), Gaps = 6/215 (2%)
Query: 78 EGFKRAMETKQHILSLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSS 137
E ++ +E +L +S A SN+ ++ + R + +
Sbjct: 865 ERIQKTVENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTLDRLLQKVKEH 924
Query: 138 SDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKI 197
S+++ KE + L + V +++ + K+ D V+K + S +N+ ++
Sbjct: 925 SEDN--TKEKHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNEL 982
Query: 198 HSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVE-TLTNDLCNDTANKHDE 256
D+ N T EDT+ K+ S+ + T + L +T N + +
Sbjct: 983 LG--LGDESLCNLETTIEDTSLV-KLETTGDTPSKRELPATPSWTRDSSLIKETTNLNLD 1039
Query: 257 SDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKR 291
SD V + Q V D+P +++ L R
Sbjct: 1040 SDKKFVRETYTSSNQTNEPDVYDKPSNSSRTSLLR 1074
>SPAC7D4.10 |vma13||V-type ATPase subunit H|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 27.5 bits (58), Expect = 3.3
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 99 ISNTD-DLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTN 157
+SN+D +L P+E +S + NN R + I SG+++E E I LT
Sbjct: 1 MSNSDLELSNAASPPPVELDNSQVDEIINNVRCVAIPWQGYQRSGSLEENELQEIENLTG 60
Query: 158 EVTTISRIVEKHDDNRVDDSKLKDEVIKDS 187
+ + + D + LK +KD+
Sbjct: 61 KPLSAYVKTAEEDTTAYSNLFLKLLSMKDT 90
>SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 27.5 bits (58), Expect = 3.3
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 282 KVNAKEKLKRVLSEK-SKTKSPTISNLVPISGGTLIPVTIVAAQPQKIPIPPFRVARNYD 340
K +E RV +E K +SN+ + I AAQ Q PIPP V
Sbjct: 156 KAIMEESANRVKAETLGDVKDQLVSNVQKATEALPTQEDIAAAQAQDRPIPPVNVGAESI 215
Query: 341 KKAVKRKNL 349
+ A K +++
Sbjct: 216 EDAYKLEDI 224
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 181 DEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYV-- 238
+E +K S+S + ++ SE + + + K+P + +DT+ + + I +++D V
Sbjct: 964 EEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDNVAT 1023
Query: 239 VETLTNDLCNDTA 251
V+ T+ + TA
Sbjct: 1024 VDKSTDAVDTSTA 1036
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 4.3
Identities = 31/164 (18%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 149 TTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNK 208
TTT ++ T V + ++ +HDD + L ++ +KDS N ++ +E+ N
Sbjct: 1312 TTTDAEFTKVVADLEKLQHEHDDWLIQRGDL-EKALKDS---EKNFLRKEAEMTE---NI 1364
Query: 209 NPIQTFEDTTKNNKITDVPPIMSQTSI-DYVVETLTNDLCNDTANKHDESDNIEVLIRLP 267
+ ++ ++ TK +I ++ + + ++ + L + K D E LI +
Sbjct: 1365 HSLEEGKEETK-KEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKESLI-IS 1422
Query: 268 NGRQVRMKSVEDEPKVNAKEKLKRVLSEKSKTKSPTISNLVPIS 311
+ + ++ ++AK +L+ +L + S+ S + + I+
Sbjct: 1423 LEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESIN 1466
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 119 STLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTIS 163
S++ S+ ++ + ++S SS+ SG+I + T+S +N +TIS
Sbjct: 169 SSITSSISSSASSSVSSSSASSSGSISSADAKTVSASSN--STIS 211
>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
repair protein Sfr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 113 PLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDN 172
PL T S + TN + ++ ++ +SDE+ E T+ + N + R+ + N
Sbjct: 110 PLRQTASPQVADTNLKPSLAVTNLNSDETNTSSEPVTSPLRTTPNSIKRQKRLFKSPISN 169
>SPCC645.10 |||ATP|Schizosaccharomyces pombe|chr 3|||Manual
Length = 484
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/87 (19%), Positives = 34/87 (39%)
Query: 145 KEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRD 204
K ET T+S ++ + E +DD S V D++ + + IR +
Sbjct: 102 KHLETATLSLFDLDIDFVGLRAESYDDKSRIPSVTPGTVETDALRRDFTVNTLFFNIRTE 161
Query: 205 DMNKNPIQTFEDTTKNNKITDVPPIMS 231
+ + ++D +T + P+ S
Sbjct: 162 KIEDITKRGYKDLQTKVLVTPISPLQS 188
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 283 VNAKEKLKRVLSEKSKTKSPTISNLVPISGGTLIPVTIVAAQPQKIPIPPFRVARN 338
VN EKLK K + ++P + P S + V A P K+P P ++ N
Sbjct: 151 VNTIEKLK----VKEENEAPPVIPAKPFSSSSEQHFRKVPALPSKLPPKPLKITAN 202
>SPBC13A2.03 |||phosphatidate
cytidylyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 7.6
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 6 KPFACTMPDCGMTFTNEDHLQLHTKKHDMMLQLGLEQKAAFVADQTPTPTRFIRNCEEVG 65
K F ++P G D L+ M Q + +K+ VAD T + ++V
Sbjct: 351 KDFGASIPGHGGLTDRMDCQFLNGVFVYMYFQSFIAEKSTSVADLLDTAVYSLTTTQQVQ 410
Query: 66 LFQDLQN 72
L +DLQN
Sbjct: 411 LVEDLQN 417
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.128 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,804,067
Number of Sequences: 5004
Number of extensions: 80771
Number of successful extensions: 295
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 267
Number of HSP's gapped (non-prelim): 47
length of query: 377
length of database: 2,362,478
effective HSP length: 74
effective length of query: 303
effective length of database: 1,992,182
effective search space: 603631146
effective search space used: 603631146
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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