Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001375-TA|BGIBMGA001375-PA|IPR007087|Zinc finger,
C2H2-type
(377 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 39 0.006
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 34 0.22
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 33 0.50
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 33 0.50
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 32 0.66
04_04_1682 + 35332907-35333720,35334583-35335202 32 0.87
06_03_0436 + 20755816-20756025,20756124-20756240,20756942-207571... 31 1.1
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 31 1.1
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 31 2.0
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 31 2.0
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 30 2.6
04_04_1401 + 33279092-33279286,33280223-33280306,33280459-332805... 30 2.6
04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414... 30 2.6
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 30 2.6
10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306 30 3.5
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 30 3.5
02_05_0093 + 25753021-25753061,25753159-25753402,25753843-257539... 30 3.5
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 30 3.5
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 29 4.6
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 29 4.6
03_05_1161 - 30831043-30831151,30831641-30831759,30831880-308319... 29 4.6
02_05_0771 - 31628535-31629133,31629223-31629987,31630808-316309... 29 4.6
02_01_0401 + 2927581-2927669,2927795-2927921,2928354-2928437,292... 29 4.6
01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804... 29 6.1
08_01_1064 + 10841095-10842326,10842412-10842663,10842942-108430... 29 8.1
08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,302... 29 8.1
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 29 8.1
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 8.1
>04_03_0659 -
18453778-18453903,18453976-18454963,18455496-18456229,
18456292-18456360,18456528-18456605,18456703-18456789,
18456881-18456931,18457021-18457092,18457177-18457304,
18458194-18458275,18458705-18458754,18459043-18459096,
18459586-18459675,18459903-18459983,18460443-18460538,
18460960-18461022,18461313-18461402,18461630-18461698,
18462051-18462291
Length = 1082
Score = 39.1 bits (87), Expect = 0.006
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 100 SNTDDLH---TPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLT 156
+N ++ H T +++ TDS+ ST +I ++E K+ ++
Sbjct: 83 ANAEEFHKKYTTKVIRKESRTDSS--STEQVIGTSSIQEMETNEQVKSKDTSKAIAERIH 140
Query: 157 NEVTTISRIVEKHDDNRVDDSKLKDEVIKDS-ISYSNNIIKIHSEIRRDDMNKNPIQTFE 215
E TT V KH+ V +SK K+++I+ S I +I SE DM + E
Sbjct: 141 KEYTTK---VNKHESRTVSNSKSKEQLIRTSNIEEKQKRKQIISENNSKDMTQVQANAEE 197
Query: 216 DTTK-NNKITDVPPIMSQTSIDYVVETLTNDLCNDTANKHDESDNIEVLIRLPNGRQVRM 274
+ K+ I +SI+ V+ T + + AN+ +S + + NG+ R
Sbjct: 198 FHKEYTTKVNRQERITDSSSIEQVIGT--SSIQEMEANEKVKSKDTSKGNK-DNGQSGRT 254
Query: 275 KSVEDEPKVNAKEKLKRVLSEKSK 298
S++ + VN K K R++ K+K
Sbjct: 255 ISLDTKKDVNLKYKDDRLILGKAK 278
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 33.9 bits (74), Expect = 0.22
Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 14/224 (6%)
Query: 78 EGFKRAMETKQHILSLESIATISNTDDLHTPQ-------MVFPLEHTDSTLFSTTNNQRN 130
+ F +E+KQ I+ S S DDL TP + L+ TD +L + +
Sbjct: 430 DNFDLGLESKQDIVKPSSSNPSSVGDDLQTPDDDKEISLIDMSLQDTDMSLKKKEGSPDS 489
Query: 131 ITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISY 190
I + + D S + E + + TI +E + ++ DE +++ +
Sbjct: 490 IYPEKLNLDRSSGDESMEEDAMETKHMDSKTIPDYLEGKSEVTLEHVSSGDESMEEDVME 549
Query: 191 SNNI---IKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTNDLC 247
+ ++ K+ D+ + + + N K D + ++++VV+ + +
Sbjct: 550 TKHVDSNTKVEHVSSGDESMEEDVMETKHVDSNTK-PDYLEGKNDVTLEHVVKEV---IL 605
Query: 248 NDTANKHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKR 291
DT + D E + + + ED+ V E +KR
Sbjct: 606 LDTVTEGSSVDQKEAISQEKPVMPTEKRKAEDQEVVANNEPIKR 649
>12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 32.7 bits (71), Expect = 0.50
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 91 LSLESIATISNTDDL----HTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKE 146
L+ +S T+D+ H +MV +H + L + + + S+++ES K
Sbjct: 910 LNTSGFHRLSETEDILIKNHNMEMVADNDHLSTNLCLSDIEMPSDALESSAAEESYIPKT 969
Query: 147 FETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDS 187
E T+ TIS + D+N DD +++ E ++ S
Sbjct: 970 EEDTSTKA---HCYTISTLEHPSDENNFDDLQMQSEAVQSS 1007
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 32.7 bits (71), Expect = 0.50
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
E+ F C + DC ++ +DHL H KH
Sbjct: 85 ERSFICPLEDCPFSYIRKDHLNRHMLKH 112
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 32.3 bits (70), Expect = 0.66
Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 6/175 (3%)
Query: 133 ISRSSSDESGAIKEFETTTISKLTNEVTTISRIV-EKHDDNRVDDSKLKDEVIKDSISYS 191
+ SSS+E + E E K T + ++ E+ D+ DDS DE K ++
Sbjct: 71 VESSSSEEDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPVARP 130
Query: 192 NNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTNDLCNDTA 251
N + DD + + ++ K P+ T+ VET ++ + +
Sbjct: 131 NKAALSTNSSSSDDSSDESLSD-DEPVKKPAAPLKKPVALATNGSKKVETDSSSSDSSSD 189
Query: 252 NKHDESD-NIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSEKSKTKSPTIS 305
+ DE D ++ P+ ++ K+ E + + + E TK+P ++
Sbjct: 190 EESDEDDKKTAAPVKKPSVAAIQKKTQESDSSDSDSDSES---DEDVPTKAPAVA 241
>04_04_1682 + 35332907-35333720,35334583-35335202
Length = 477
Score = 31.9 bits (69), Expect = 0.87
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 10 CTMPDCGMTFTNEDHLQLHTKKHDMMLQLGLE 41
C+ PDCG F D L LH + +LG E
Sbjct: 247 CSCPDCGEIFVRPDSLHLHQSIRHAVSELGAE 278
>06_03_0436 +
20755816-20756025,20756124-20756240,20756942-20757137,
20757393-20757544,20757653-20757736,20757848-20757925,
20757958-20758116,20758219-20758251,20759119-20759826,
20759917-20759998,20760093-20760449,20760586-20760692,
20760796-20761001,20761480-20761623,20761715-20761800,
20762120-20762283,20762559-20763119
Length = 1147
Score = 31.5 bits (68), Expect = 1.1
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 170 DDNRVDDS-KLKDEVIKDSISYSNNIIKI--HSEIRRDDMNKNPIQ------TFEDT--- 217
++ RV+D +L D+ + +S Y N IIK+ E D + K I+ ++E T
Sbjct: 415 NNGRVEDKHQLTDKDVANSAKYRNEIIKLMKEKEDSNDTIMKLNIELEAMKSSYEGTRIL 474
Query: 218 TKNNKITDVPPIMSQTSIDYVVETLTNDLCNDTANKHDESDNIEV-LIRLPNGRQVRMKS 276
+ K + +M + SI+Y+V L +L + ++ +E + N + R+K
Sbjct: 475 LDSKKKEVLQLLMDKESIEYIVSQLKQELAIERSSHQTHIQELETRAFQANNKLEQRIKE 534
Query: 277 VE---DEPKVNAKEKLKRVLSEKSK 298
+E ++ K ++ L+ +L +S+
Sbjct: 535 MELMLEDSKTRVRD-LEELLESRSQ 558
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKK 31
E+P+ C+ PDCG +F H KK
Sbjct: 874 ERPYKCSAPDCGQSFRYVSDYSRHRKK 900
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 137 SSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIK 196
+ E A+K+ + K + +S + EK+ V S+L DE +K+ + + +
Sbjct: 208 AESEVAALKKLLEASAQKNGSLEVQVSHLAEKNASLEVQVSRL-DEALKECVRQLHLAQE 266
Query: 197 IHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTNDL 246
+E D + K+ E++ N+IT++ + T ++ ++ +DL
Sbjct: 267 DQAEKVHDVVTKSQELESENSKLQNRITELKKQLETTKLEASNMSIDHDL 316
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 88 QHILSLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEF 147
QHI S E+ A + D+ +V E T TL + + +T+S S DE+
Sbjct: 1145 QHITS-ENEALVEKLKDIAA--IVEEHERTKVTLAESEEENKTLTLSLQSKDEA------ 1195
Query: 148 ETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMN 207
+ ++ NE+ ++ + DDN + + +L +E+ S ++ + + D +
Sbjct: 1196 ----MMQMENEIRSLQDELRSSDDNLLREKRLMEELQSTLASLTSQLGHKDQALLSFDEH 1251
Query: 208 KNPIQTFED 216
K + D
Sbjct: 1252 KTELNRLRD 1260
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 30.3 bits (65), Expect = 2.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
++PF+C + C +++ +DHL H H
Sbjct: 284 QRPFSCHVDGCPFSYSRKDHLNRHLLTH 311
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 3 EPEKPFACTMPDCGMTFTNEDHLQLHTKKH 32
E +K F C +CG TF LQ H + H
Sbjct: 348 ESKKEFICPEENCGKTFKYASKLQKHEESH 377
>04_04_1401 +
33279092-33279286,33280223-33280306,33280459-33280524,
33280945-33281028,33281181-33281246,33281719-33281802,
33281955-33282020,33282323-33282388,33282667-33282726,
33282805-33282888,33282968-33283111,33283552-33283586,
33283694-33283746,33283828-33283928,33284516-33284974
Length = 548
Score = 30.3 bits (65), Expect = 2.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 168 KHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVP 227
+ DDN+ D KL+D+ D S S + K S RD K PI D +NN I
Sbjct: 201 RSDDNKSDSCKLRDKTTSDDRSKSGD-NKYDSCKTRD---KKPIVDLADEFENNTIKKKI 256
Query: 228 PIMSQ 232
++S+
Sbjct: 257 TLLSE 261
>04_04_0285 -
24136865-24137000,24137554-24137611,24138142-24141480,
24141789-24142218,24142861-24142928,24143015-24143165
Length = 1393
Score = 30.3 bits (65), Expect = 2.6
Identities = 49/190 (25%), Positives = 74/190 (38%), Gaps = 10/190 (5%)
Query: 186 DSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTND 245
D+ S SNNI + ++ DD NK + + + + TD + Q+ + V + D
Sbjct: 795 DNTSVSNNISTENVVVQDDDKNKATKRQRKKISLKHVPTDNDKTI-QSLDEQVNQVAIED 853
Query: 246 LCNDTANKHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLS---EKSKTKSP 302
L A K D V I P G ++ K+ + K S E SK+
Sbjct: 854 LNGSNATKADLVQGGSV-IDGPAGTVENVQKKSRSTKIRTPKVQKANPSAHFEDSKSAKD 912
Query: 303 TISNLVPISG--GTLIPVTIVAAQPQKIPIPPFRVA-RNYDKKAVK--RKNLDTGNQCHS 357
+ V G GT T V A Q + A R A+K +K+ TG Q +
Sbjct: 913 SQGKCVSYIGESGTHSNDTAVGAPTQSFAVQEDATALRTLTPSALKGRKKSSKTGLQSQN 972
Query: 358 VSSEKQSDLD 367
S + SD+D
Sbjct: 973 ASLDHGSDVD 982
>02_01_0459 +
3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 30.3 bits (65), Expect = 2.6
Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 5/180 (2%)
Query: 116 HTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVD 175
H T TN+ R++++S ++DE K ++ I +E D++
Sbjct: 66 HEKKTDDGETNSSRSLSLS-DNNDEKKKDKFSSGDEKEDHEKQLKQIRLDMEALRDDKTQ 124
Query: 176 DSKLKDEVIKDSISYSNNIIKIHSEIRR--DDMNK--NPIQTFEDTTKNNKITDVPPIMS 231
+ DE I + S+ + + ++RR D+ ++ + ++ F S
Sbjct: 125 MEVILDEKIDEVRKISSKVNDLEVQLRREKDECHRMTSKMKKFIKAHARFLKAQEEVKRS 184
Query: 232 QTSIDYVVETLTNDLCNDTANKHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKR 291
Q + + + L +D+ AN+ S N ++ R PN + +S+ AK KR
Sbjct: 185 QARFERLGDLLASDILKRGANEEGSSVNEDLNERSPNTAATKKRSIPYSTSEEAKAVKKR 244
>10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306
Length = 387
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 103 DDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVT-T 161
D+ P V P + N+ ++ SSS + A+K+ TTT+ + + T
Sbjct: 219 DESFAPVHVVPAVQVNEAFEVARNSVELLSTVLSSSPQKEALKDDLTTTLVQQCQQCQRT 278
Query: 162 ISRIVEKHDDN 172
I RI+E DN
Sbjct: 279 IQRIIETAGDN 289
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKHD 33
E C P CG FT++ L+ H K H+
Sbjct: 173 ENYHVCPFPACGKRFTSDSKLKSHVKGHE 201
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 5 EKPFACTMPDCGMTFTNEDHLQLHTKKH 32
+K F C P CG F+ + +L+ H K H
Sbjct: 143 QKDFICPHPGCGKAFSLDFNLRSHLKTH 170
>02_05_0093 +
25753021-25753061,25753159-25753402,25753843-25753905,
25753985-25754179,25754489-25754893
Length = 315
Score = 29.9 bits (64), Expect = 3.5
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 235 IDYVVETLTNDLCNDTANKHDESDNIEVLIRL----PNGRQVRMKSVEDEPKVNAKEKLK 290
+ + VET N N H I+ L+ L P+GR V + SV + + EKLK
Sbjct: 130 MQHTVETAENAEECLKINYHGNKKTIQALLPLLQSSPDGRIVTVSSVFGQLSFFSGEKLK 189
Query: 291 RVLSEKSKTKSPTISNLVPI 310
L++ SK I L +
Sbjct: 190 EELNDFSKLSEERIDELAEL 209
>01_05_0212 +
19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 69 DLQNDNPFDEGFKRAMETKQHILSLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQ 128
D++++ + R M + I+ ++T+ N D + Q +E S L TTN Q
Sbjct: 551 DMESERVVQDALNRVMLERTTIIVAHRLSTVKNADVISVLQQGKMVEQDKSKLLLTTNQQ 610
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 29.5 bits (63), Expect = 4.6
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 294 SEKSKTKSPTISNLVPISGGTLIPVTIVAAQ----PQKIPIPPF-RVARNYD-KKAVKRK 347
++K+K K T VP+ VT AQ P KI PPF +NY+ + V +
Sbjct: 3027 ADKTKAKQMTFGQPVPVPSDATRSVTDQGAQQPQRPAKIESPPFLETIKNYEYTQNVSDE 3086
Query: 348 NLDTGNQCHSVSSEKQ 363
LD S++++
Sbjct: 3087 TLDKNKSSGKPSADQE 3102
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 100 SNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKE-----FETTTISK 154
S+ DL LE+T ++S ++ + + S + K+ ++ S
Sbjct: 2944 SHPTDLFMDYYKLLLENTFRLVYSMVRPEKEKSADKDKSCKVPNTKDLKLDGYQDVLCSY 3003
Query: 155 LTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPI 211
++N TT R + + SK ++DS YS+ + K+H I + +NP+
Sbjct: 3004 ISNAHTTFVRRYARRLFLHLCGSKTHYYSVRDSWQYSHEVKKLHKIINKSGGFRNPV 3060
>03_05_1161 -
30831043-30831151,30831641-30831759,30831880-30831906,
30832117-30832158,30832293-30832392,30832481-30832545,
30832619-30832694,30832878-30832939,30833248-30833253,
30834704-30834782,30834890-30834957
Length = 250
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/73 (23%), Positives = 37/73 (50%)
Query: 253 KHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSEKSKTKSPTISNLVPISG 312
KH S ++++ N Q + KS+++E K+ K+K+++ + +T+ T S+
Sbjct: 146 KHIRSRKSQLMLESINELQRKEKSLQEENKLVEKQKVQKQQVQWDQTQPQTSSSSSSFMM 205
Query: 313 GTLIPVTIVAAQP 325
+P T ++ P
Sbjct: 206 REALPTTNISNYP 218
>02_05_0771 -
31628535-31629133,31629223-31629987,31630808-31630905,
31631024-31631193,31631297-31631596,31632208-31632618
Length = 780
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 7 PFACTMPDCGMTFTNEDHLQLHTKKHDMMLQLGLEQKAAFVADQTPTPTR 56
PF+C P F N L + + D++ +L LE+K + + DQ+P R
Sbjct: 35 PFSCGAPSSA-AFCNP-RLPIEQRADDLVSRLTLEEKISQLGDQSPAVDR 82
>02_01_0401 +
2927581-2927669,2927795-2927921,2928354-2928437,
2928546-2928662,2928754-2928945,2929031-2929234,
2929322-2929809,2930429-2930528,2930686-2930745,
2931007-2931126,2931407-2931751
Length = 641
Score = 29.5 bits (63), Expect = 4.6
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 161 TISRIVEKHDDNRVDDS----KLKDEVIK-DSISYSNNIIKIHSEIRRDDMNKNPIQTFE 215
+++R++EKH D + +S K +E K D++S+ +I+KI S ++ ++ NP Q E
Sbjct: 259 SLNRLLEKHRDEEMQESCSTDKEGEEDEKIDTLSFEQSILKITS-MKLGNLWNNPNQLSE 317
Query: 216 DTTK--NN---KITDVPPIMSQTSIDYVVETLTNDLCNDTANKHDESDNIEVLIRLP--- 267
+ + N ++++ ++ + S D + L T +S I ++R P
Sbjct: 318 EMVRCMRNIFLRLSESSKMLPKESSD-CSSSSAERLSGSTLASFSDSSIIPSMLRSPSVD 376
Query: 268 ---NGRQVRMKSVEDEPKVNAKEKLKRV 292
N S D KVN KE + +
Sbjct: 377 SNRNDEMTTEASNFDPYKVNGKESRRDI 404
>01_05_0491 -
22680011-22680125,22680210-22680307,22680392-22680472,
22680564-22680677,22680757-22680823,22680947-22681017,
22681099-22681236,22681324-22681530,22681630-22681773,
22681856-22682017,22682117-22682173,22682256-22682348,
22682425-22682542,22682678-22682817,22683031-22683590,
22683703-22683805
Length = 755
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 161 TISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKN 220
++ R+ K D ++ KL+ V S+ Y +++ S + RDD + P ED +N
Sbjct: 265 SLKRMEMKASDLEEENQKLRGAVA--SVPY----VRLPSNVNRDDPDLEPTPENEDENEN 318
Query: 221 NKIT--DVPPIMSQTSID 236
K +V P++ +D
Sbjct: 319 EKAVYCEVKPMIVDRGVD 336
>08_01_1064 +
10841095-10842326,10842412-10842663,10842942-10843020,
10843274-10843459
Length = 582
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 146 EFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLK 180
E + TT+S+ T + + R++ HD D++K K
Sbjct: 258 EVQETTVSEKTTTSSEVPRVLRSHDSKSKDENKEK 292
>08_01_0343 - 3025577-3025810,3026428-3026505,3026630-3026748,
3027566-3027645,3028034-3028107,3028536-3028620,
3028704-3028789,3028968-3029038,3029126-3029207,
3029490-3029531,3029552-3029584,3029699-3029794,
3030163-3030414,3030970-3031149,3032079-3032119,
3032341-3032470,3032504-3032606,3032686-3032773,
3033151-3033304,3033688-3033739,3033815-3033894,
3034478-3034789,3034886-3034955,3035033-3035100,
3035405-3035678,3036408-3036580,3037036-3037128,
3037228-3037443
Length = 1121
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 17 MTFTNEDHLQLHTKKHDMMLQLGLEQKAAFVADQTPTPTRFIRNCEEVGLFQDLQNDNPF 76
+TFT + K D L+ L +KA+F+ D + N E+ L + ND
Sbjct: 1019 VTFTALHLFSFVSPKDDQSLRDFLIKKASFLEDWLKSLFSLFNNVEDQPLANEAIND--- 1075
Query: 77 DEGFKRAMETKQHILS-LESIATISNTDDLHT 107
++GF + K + S ++S+ I +++ HT
Sbjct: 1076 EDGFSPNVAQKAMLSSAVKSLLDIYTSENQHT 1107
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 28.7 bits (61), Expect = 8.1
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 181 DEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVE 240
DEV+ + + I+K R + +K T + T + K P + S SI + V
Sbjct: 1094 DEVLAEYVYEKLRILKKKFSRRASETSKQSQSTPVNNTSSYKQQTSPKLRSDGSICHQVT 1153
Query: 241 TLTNDLCNDTANKHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSEK 296
T+ DL N +++ D + + L + + E V E L+R+ ++
Sbjct: 1154 TIDGDLEN-VSHEEAPHDILTEEMILEQKELISVLETHREEHVLRDELLERITEKR 1208
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.7 bits (61), Expect = 8.1
Identities = 24/121 (19%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 144 IKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRR 203
+++ ET + +NE + +D+ V +L+ E+ +++ ++SN + I
Sbjct: 464 LEQEETKEADEASNETNSAIFSDLNQEDSIVASKQLETELAEEAAAFSN--LDQEGGIAD 521
Query: 204 DDMNKNPIQTFED--TTKNNKITDVPPIMSQTSIDYVVETLTNDLCNDTANKHDESDNIE 261
+ ++ ++ T+ +IT PP T + + ++ ND E D+IE
Sbjct: 522 SESQVADLEEAKEIEATETEEITHQPPAAVSTELPKEDNSTRSEPHNDDIQHSLEQDSIE 581
Query: 262 V 262
V
Sbjct: 582 V 582
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 97 ATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLT 156
+ + + LH + + + + +N+ + + ++ K+ E I K
Sbjct: 1917 SNVQDNKQLHDVGLQTQVRERSVDIGQQDEDMKNVNLDQQQKEDEEIEKQKEDEEIEKQK 1976
Query: 157 NEVTTISRIVEKHDDNRVD 175
E+ T +KHDD RVD
Sbjct: 1977 EELQTDE---QKHDDKRVD 1992
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.128 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,473,946
Number of Sequences: 37544
Number of extensions: 426486
Number of successful extensions: 1079
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1045
Number of HSP's gapped (non-prelim): 51
length of query: 377
length of database: 14,793,348
effective HSP length: 83
effective length of query: 294
effective length of database: 11,677,196
effective search space: 3433095624
effective search space used: 3433095624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -