GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001375-TA|BGIBMGA001375-PA|IPR007087|Zinc finger,
C2H2-type
         (377 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    29   0.21 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   1.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   6.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   6.0  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 0.21
 Identities = 15/66 (22%), Positives = 34/66 (51%)

Query: 168 KHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVP 227
           K+  N ++   L+D +I   I +  ++IK  SE+++    K+  +    T + +++ +  
Sbjct: 57  KNYANNLEIEDLRDGMIAQMIEFMESMIKEMSELKKQLKQKSTQEIEVQTAQPSELAEDA 116

Query: 228 PIMSQT 233
           P + QT
Sbjct: 117 PFVPQT 122


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 279  DEPKVNAKEKLKRVLSEKSKTKSPTISNLVPISGGTLIPVTIVAAQPQKIPIPPFRVARN 338
            D P V+ KE+L   LS      S      +P SG           Q   +P   F    N
Sbjct: 1417 DSP-VDEKERLLMFLSFSPYVSSSAFFEFIPFSGKQFQMCFSATNQYPNMPKLNFLNVLN 1475

Query: 339  YDKKAVKRKNLDTGNQCHSVS 359
            +DK       L  G +C   S
Sbjct: 1476 FDKVGSMNWELAYGEKCQGGS 1496


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 6   KPFACTMPDCGMTFTNEDHLQLHTK-KH 32
           +P +   P CG  FT  D+++ H K KH
Sbjct: 919 RPQSHECPVCGQKFTRRDNMKAHCKVKH 946


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)

Query: 347  KNLDTGNQCHSVSSEKQS 364
            KN+++GN C +   EKQ+
Sbjct: 1203 KNIESGNTCETAKEEKQT 1220


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)

Query: 8   FACTMPDCGMTFTNEDHLQLHTK-KHDM 34
           F C  P C  T+T  D+L+ H K KH M
Sbjct: 524 FEC--PLCRATYTRSDNLRTHCKFKHPM 549


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 255 DESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSEKSKTKSPTISNLVPISGGT 314
           D S  IE    +P+ ++VR +     P+ N KE++   L E+ + K   +S    + GG 
Sbjct: 447 DPSIRIEPPAAIPS-QEVRKRP----PEKNPKEEIDEELEEQRQRKEAGLSRTARLFGGL 501

Query: 315 L 315
           +
Sbjct: 502 I 502


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 149 TTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNN 193
           +  ISKLT E+ T  R V+K  D +++  + + E  + +I   N+
Sbjct: 913 SANISKLTVEIKTSERNVQKSKD-KINSMEDEVEAAQSAIRKGND 956


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.128    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,094
Number of Sequences: 2123
Number of extensions: 15606
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 10
length of query: 377
length of database: 516,269
effective HSP length: 65
effective length of query: 312
effective length of database: 378,274
effective search space: 118021488
effective search space used: 118021488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)