GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001374-TA|BGIBMGA001374-PA|undefined
         (295 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.          32   2.1  
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.            32   2.1  
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.        32   2.1  
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p...    32   2.1  

>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 23  VLPALSAEDVSYQACVDKYSRKGYQP 48
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 23  VLPALSAEDVSYQACVDKYSRKGYQP 48
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
          Length = 1028

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 23  VLPALSAEDVSYQACVDKYSRKGYQP 48
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
           protein.
          Length = 1097

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 23  VLPALSAEDVSYQACVDKYSRKGYQP 48
           VL AL +E + Y   V KY RKGY+P
Sbjct: 944 VLQALGSEPIQYAVPVVKYDRKGYKP 969


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.135    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,227,275
Number of Sequences: 224733
Number of extensions: 2026928
Number of successful extensions: 7305
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7301
Number of HSP's gapped (non-prelim): 4
length of query: 295
length of database: 73,234,838
effective HSP length: 89
effective length of query: 206
effective length of database: 53,233,601
effective search space: 10966121806
effective search space used: 10966121806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)