Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001374-TA|BGIBMGA001374-PA|undefined
(295 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.26
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 26 0.46
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.61
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 25 1.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 3.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 4.3
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 4.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 7.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 7.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 7.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 7.5
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.26
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 221 SSRRFIDYPAPQMQDSPRRKRST----VYPLFDRTNREHNYQSHPVKINGYTPEKYTSYF 276
S R++ + + +D R+RS + L ++T +N + N Y Y + +
Sbjct: 288 SYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNY 347
Query: 277 SNNVKNL 283
+NN K L
Sbjct: 348 NNNCKKL 354
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.8 bits (54), Expect = 0.46
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 221 SSRRFIDYPAPQMQDSPRRKRSTVYPLFDRTNREHNYQSHPVKINGYTPEKYTSYFSNNV 280
S R++ + + +D R+RS + + +NY ++ K N Y Y+ N +
Sbjct: 288 SYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNNYKYN-YNNYNKKLYYKNYI 346
Query: 281 KNL 283
N+
Sbjct: 347 INI 349
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.4 bits (53), Expect = 0.61
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 249 DRTNREHNYQSHPVKI--NGYTPEKYTSYFSNNVKNLSNFNPRL 290
DR RE + + + N Y Y +Y + N N +N+N +L
Sbjct: 302 DRKERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNKKL 345
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 24.6 bits (51), Expect = 1.1
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 50 QEWSDHYTCHRYRCEIRDGKYFIAAVGCRKPKIPENALE 88
+E + CH Y E+ A+G KP NA E
Sbjct: 170 KENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNAFE 208
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.2 bits (50), Expect = 1.4
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 56 YTCHRYRCEIRDGKYFIAAVGCRKPKIPENALECHEYIEDENVEF 100
+ C +Y +IRD K + CR+ +P+ E H D EF
Sbjct: 610 FNCTQY--QIRDHKDVTQCISCRQGTVPD---ETHSACRDIPEEF 649
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.8
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 249 DRTNREHNYQSHPVKI---NGYTPEKYTSYFSNNVKNLSNFNPRLSLNL 294
DRT RE + + + N Y ++NN N +N+N +L N+
Sbjct: 68 DRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 247 LFDRTNREHNYQSHPVKINGYTPEK-YTSY 275
L +RTNR+ N +S + N Y E+ Y Y
Sbjct: 29 LEERTNRKRNSRSREREQNSYKNEREYRKY 58
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 247 LFDRTNREHNYQSHPVKINGYTPEK-YTSY 275
L +RTNR+ N +S + N Y E+ Y Y
Sbjct: 29 LEERTNRKRNSRSREREQNSYKNEREYRKY 58
Score = 21.8 bits (44), Expect = 7.5
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 249 DRTNREHNYQSHPVKI---NGYTPEKYTSYFSNNVKNLSNFNPRLSLNL 294
DR RE + + + N Y ++NN N +N+N +L N+
Sbjct: 68 DRAERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 249 DRTNREHNYQSHPVKINGYTPEKYTSYFSN 278
DRT RE + ++ + N Y + Y + +++
Sbjct: 291 DRTERERSKETKIISSNNYNYKNYNNNYNS 320
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 249 DRTNREHNYQSHPVKINGYTPEKYTSYFSN 278
DRT RE + ++ + N Y + Y + +++
Sbjct: 302 DRTERERSKETKIISSNNYNYKNYNNNYNS 331
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 204 ASPGIFNSRGAADGSDISSRRFIDYPAPQMQD 235
+ PG N G++DG D ++ P P+ Q+
Sbjct: 156 SQPGSLNGYGSSDGCDARKKK---GPTPRQQE 184
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.3
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 166 AVFNSSRPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGI 208
A+ SRP P V + GI PVG G PG+
Sbjct: 234 AILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGM 276
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 127 ELFPDKYMSS 136
E+FPDKYM S
Sbjct: 149 EVFPDKYMDS 158
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 103 CCARLRCVVEVNGERIVQTRGQPGELFP 130
C L C + R+ RGQP + P
Sbjct: 76 CLEDLDCSLRKLNSRLFVIRGQPADALP 103
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/57 (19%), Positives = 24/57 (42%)
Query: 223 RRFIDYPAPQMQDSPRRKRSTVYPLFDRTNREHNYQSHPVKINGYTPEKYTSYFSNN 279
R++ + + +D R+RS + + +NY ++ N Y Y++ N
Sbjct: 57 RKYRETSKERSRDRTERERSREPKIISSLSNNYNYSNYNNYNNNYNNYNKKLYYNIN 113
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.8 bits (44), Expect = 7.5
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 166 AVFNSSRPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGI 208
A+ +RP P V + GI PVG G PG+
Sbjct: 177 AILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGM 219
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 166 AVFNSSRPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGI 208
A+ +RP P V + GI PVG G PG+
Sbjct: 234 AILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGM 276
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,739
Number of Sequences: 429
Number of extensions: 4659
Number of successful extensions: 23
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 18
length of query: 295
length of database: 140,377
effective HSP length: 57
effective length of query: 238
effective length of database: 115,924
effective search space: 27589912
effective search space used: 27589912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)
- SilkBase 1999-2023 -