Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001372-TA|BGIBMGA001372-PA|IPR002558|I/LWEQ,
IPR011000|Apolipophorin III-like, IPR009072|Histone-fold
(1856 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38250.1 68415.m04697 DNA-binding protein-related contains si... 36 0.26
At1g56040.1 68414.m06434 U-box domain-containing protein contain... 35 0.45
At1g29560.1 68414.m03615 expressed protein ; expression supporte... 35 0.45
At2g28690.1 68415.m03487 expressed protein 34 0.79
At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel... 34 1.0
At2g22140.1 68415.m02630 expressed protein ; expression supporte... 33 1.4
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 33 1.8
At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative s... 33 1.8
At3g49055.1 68416.m05359 hypothetical protein 33 1.8
At2g32140.1 68415.m03928 disease resistance protein (TIR class),... 33 1.8
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 33 2.4
At1g66840.1 68414.m07597 expressed protein contains Pfam profile... 33 2.4
At1g24560.1 68414.m03090 expressed protein 33 2.4
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 32 3.2
At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2) (T... 32 3.2
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 32 3.2
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 32 4.2
At3g54170.1 68416.m05988 FKBP12 interacting protein (FIP37) iden... 32 4.2
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 32 4.2
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 32 4.2
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 32 4.2
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 32 4.2
At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical... 32 4.2
At4g13540.1 68417.m02111 expressed protein 31 5.5
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 31 5.5
At3g60930.1 68416.m06816 expressed protein 31 5.5
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 31 5.5
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 31 5.5
At2g37420.1 68415.m04589 kinesin motor protein-related 31 5.5
At5g64520.2 68418.m08107 DNA repair protein-related contains wea... 31 7.3
At5g64520.1 68418.m08106 DNA repair protein-related contains wea... 31 7.3
At5g55820.1 68418.m06956 expressed protein 31 7.3
At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to ... 31 7.3
At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to ... 31 7.3
At4g02710.1 68417.m00366 kinase interacting family protein simil... 31 7.3
At3g56770.1 68416.m06314 basic helix-loop-helix (bHLH) family pr... 31 7.3
At1g51745.1 68414.m05831 expressed protein 31 7.3
At1g22275.1 68414.m02784 expressed protein 31 7.3
At1g03080.1 68414.m00282 kinase interacting family protein simil... 31 7.3
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 31 9.7
At4g20240.1 68417.m02957 cytochrome P450, putative similar to |C... 31 9.7
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 31 9.7
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 31 9.7
At1g17690.1 68414.m02190 expressed protein 31 9.7
>At2g38250.1 68415.m04697 DNA-binding protein-related contains
similarity to DNA-binding protein GI:170271 from
[Nicotiana tabacum]
Length = 289
Score = 35.9 bits (79), Expect = 0.26
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1027 DTEW---WKALAKRNLEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEV 1083
++EW W+A K EK EE RR+++ L +E +M RD+ E+ ++R + ++
Sbjct: 215 ESEWREGWEAREKERAEKEEEWRRKMEELEKERLAME--RMWRDREEQRRSREEMRAEKR 272
Query: 1084 DTSI 1087
D+ I
Sbjct: 273 DSLI 276
>At1g56040.1 68414.m06434 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 437
Score = 35.1 bits (77), Expect = 0.45
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 1062 IKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQKYE-EMVLK 1105
+ +ERD+ EK K +L+T +E+D + K E+++KYE EM+L+
Sbjct: 211 LAIERDRIEKVKIQLETVENEIDNTRLKAE--EFERKYEGEMILR 253
>At1g29560.1 68414.m03615 expressed protein ; expression supported by
MPSS
Length = 521
Score = 35.1 bits (77), Expect = 0.45
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 1027 DTEWWKALAKRNLEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDE-VDT 1085
+TE + +A NL+ + +SR R EL LE KM E EK R++ ID V
Sbjct: 316 NTERQRTMAHDNLQIVSDSRMHDPRRHDTELRLEREKMV--NRELEKQRIEHLIDPLVRR 373
Query: 1086 SIQKKRDLEYDQK 1098
+Q KRD E +Q+
Sbjct: 374 YMQAKRDKEVEQR 386
>At2g28690.1 68415.m03487 expressed protein
Length = 231
Score = 34.3 bits (75), Expect = 0.79
Identities = 18/88 (20%), Positives = 45/88 (51%)
Query: 1282 QEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVTNVT 1341
QE ++ LR +QY + + ++A E+ ++ E N ++ ++++DE+
Sbjct: 11 QESMDELRQKLQYSSFELEAVKAKANEETKLHQEEVKNLLHLLKLARQERDEAKDQLQKL 70
Query: 1342 SLLKTVKAVEDEHTRGTRALESTIEAIS 1369
+KT ++ + ++ G+ ++S E +S
Sbjct: 71 LTIKTNSSITESNSHGSSPVDSFFEPVS 98
>At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC1) almost identical
to cyclic nucleotide-regulated ion channel 1 pir:T51354,
GI:11357236 from [Arabidopsis thaliana]
Length = 716
Score = 33.9 bits (74), Expect = 1.0
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 1039 LEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQK 1098
LE+M RR+ +++ H L+ E ++ +YE+ K + +DE + +DL D K
Sbjct: 414 LEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIK 473
Query: 1099 YE---EMVLKLIEFAKKDFIYKGFDPLIERLK 1127
+++++ F K D + D L +RL+
Sbjct: 474 RHLCLALLMRVPMFEKMD--EQLLDALCDRLQ 503
>At2g22140.1 68415.m02630 expressed protein ; expression supported by
MPSS
Length = 506
Score = 33.5 bits (73), Expect = 1.4
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 977 SIKNSPEREMI--LTPQEPRGSTEIFITPEAKSAPTADPIKAKVEFWKLFKDDTEWWKAL 1034
S ++SP + I ++ QE + I + K T P+ + K + + A+
Sbjct: 137 SFRSSPTNDTIEVVSDQEKEDISVEKIGRKKKIRTTTLPVPGEA-LPKKRQSKEDKTSAM 195
Query: 1035 AKRNLEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSI 1087
++ L K E+ R E E + ++ E+ K+EK K L++ + E+DT +
Sbjct: 196 EEKKLRK-EQERLEKAASKAEEAERKRLEKEKKKWEKGKLALKSIVAEIDTKV 247
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 33.1 bits (72), Expect = 1.8
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1036 KRNLEKME-ESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLE 1094
+R EK+E E RE ++ E E KMER+ +E+EK RL+ E + I+++R+ E
Sbjct: 146 EREREKLEREKEREREKIE-REKEREREKMEREIFEREKDRLKL---EKEREIERERERE 201
>At5g47210.1 68418.m05821 nuclear RNA-binding protein, putative
similar to nuclear RNA binding protein GI:6492264 from
[Arabidopsis thaliana]
Length = 357
Score = 33.1 bits (72), Expect = 1.8
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 995 GSTEIFITPEAKSAPTADPIKAKVEFWKLFKDDTEWWKALAKRNLEKMEESRRELQRFSG 1054
G+TE I P ++ PT + K+ V + +D+T AK+ L E++++E +
Sbjct: 174 GTTEDDIPPTSEE-PTTEVEKSPVAEKQGGEDETPE----AKKELTAEEKAQKEAEEAEA 228
Query: 1055 HELVLEEIKMERDKYEKEKTRLQTFIDE--VDTSIQKKRDLEYDQKY--EEMVLKL 1106
E+ LEE E+ EK+K T ++E VDT + + ++K EE+ +KL
Sbjct: 229 REMTLEE--YEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKL 282
>At3g49055.1 68416.m05359 hypothetical protein
Length = 480
Score = 33.1 bits (72), Expect = 1.8
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1282 QEDLNRLRAVV-QYRNSLRKRPHSRAEEQ-LRMLDEIHNNRFRE--VEDVQEKKDESVMV 1337
++ + +LR V Q + SL + SR EE LR + E + E V + + E +
Sbjct: 268 EKTMKKLRQEVSQLKISLEE---SRLEEVGLRKVTEEQAQKLAENTVYINKLQNQEKFLA 324
Query: 1338 TNVTSLLKTVKAVEDEHTRGTRALESTIEAISQEIEV 1374
NV L+K ++ E E +R A E +EA +E+EV
Sbjct: 325 QNVEELVKAIREAESEVSRWREACELEVEAGQREVEV 361
>At2g32140.1 68415.m03928 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 371
Score = 33.1 bits (72), Expect = 1.8
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 643 GTLQSDKES-DTFSDHRENILKTAKA-LVEDTKTLVGGAAGTQEQLADAAQNAVTTIVQL 700
GT +S K + D D +++LK A LV T ++V A Q +DA Q A T +V +
Sbjct: 256 GTFKSQKPNFDDEDDDGDSLLKALVAKLVASTTSIVAAYAELQRAHSDAIQAAETVVVDV 315
Query: 701 CEVVKLGAMSLGSG 714
+ +L S G G
Sbjct: 316 KTLSELIRSSNGGG 329
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity to
myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 32.7 bits (71), Expect = 2.4
Identities = 22/101 (21%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 1279 STSQEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVT 1338
S QE+L + + + +L+K +AEE + L EI+ + ++++++ E
Sbjct: 84 SQLQEELKKAKEQLSASEALKKEAQDQAEETKQQLMEINASEDSRIDELRKLSQE----- 138
Query: 1339 NVTSLLKTVKAVEDEHTRGTRALESTIEAISQEIEVLMSPS 1379
+ ++A++ +H + AL ST+ + Q+++ +S S
Sbjct: 139 RDKAWQSELEAMQRQHAMDSAALSSTMNEV-QKLKAQLSES 178
>At1g66840.1 68414.m07597 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 607
Score = 32.7 bits (71), Expect = 2.4
Identities = 25/116 (21%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 1034 LAKRNLEKMEESRRELQRFSGHELV-LEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRD 1092
+AK LE + ++ + + + E++K +R+ +KE+ +L+ ++ IQ K +
Sbjct: 339 IAKDQLEAVSKAEERISYLADNLTTSFEKLKSDREAAKKEELKLREEARIINNEIQ-KTE 397
Query: 1093 LEYDQKYEEMVLKLIEFAK----KDFIYKGFDPLIERLKALANVHVEGRKRKVVNI 1144
+D K +E++ KL E K + + + ++E K + +E R+ + I
Sbjct: 398 TGFDGKEKELLSKLDELEKAKHAESLALEKLETMVE--KTMETREMESRRNSTITI 451
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 32.7 bits (71), Expect = 2.4
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1304 SRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVTNVTSLLKTVKAVEDEHTRGTRALES 1363
S +QL + N R R++E+++EK E + NV L+ + A E+E TR A E
Sbjct: 490 SSLRKQLDTQTKELNQRMRQIEELKEK--ERIANENVEGLMTDIAAAEEEITRWKVAAEQ 547
Query: 1364 TIEA 1367
A
Sbjct: 548 EAAA 551
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 32.3 bits (70), Expect = 3.2
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1032 KALAKRNLE-KMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKK 1090
K L LE K++ RRE + + V EE+K++R+K E ++ L+ DE+ I++
Sbjct: 707 KRLDAERLEIKLDRERREREWAELKDSV-EELKVQREKLETQRHMLRAERDEIRHEIEEL 765
Query: 1091 RDLE 1094
+ LE
Sbjct: 766 KKLE 769
>At5g62410.1 68418.m07832 SMC2-like condensin, putative (SMC2)
(TITAN3) very strong similarity to SMC2-like condensin
(TITAN3) [Arabidopsis thaliana] GI:14279543; contains
Pfam profiles PF02483: SMC family C-terminal domain,
PF02463: RecF/RecN/SMC N terminal domain
Length = 1175
Score = 32.3 bits (70), Expect = 3.2
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 1041 KMEESRRELQRFSG-HELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQKY 1099
+++E R ++ H+ L E+K+ K ++ T++ F+ + + +QK D++ ++K
Sbjct: 851 EVDEQRAKVDALQKIHDESLAELKLIHAKMKECDTQISGFVTDQEKCLQKLSDMKLERKK 910
Query: 1100 EEMVLKLIEFAKKDFIYKGFDPLIER 1125
E + +E KD K D L+E+
Sbjct: 911 LENEVVRMETDHKDCSVK-VDKLVEK 935
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila melanogaster];
supporting cDNA gi|20465326|gb|AY096427.1|
Length = 601
Score = 32.3 bits (70), Expect = 3.2
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 1006 KSAPTADPIKAKVEFWKLFKDDTEWWKALAKRNLEKMEESRRELQRFSGHELVLEEIKME 1065
K AP + ++ K+E+ + +++ E +A E+ E+ + + G + ++EE + +
Sbjct: 315 KEAPQSGSVQKKLEYQEKEEEEQEEEEAEHSVQPEEPAEADNQKENSEGDQPLIEEEEED 374
Query: 1066 RDKYEKEKTRLQTFIDEVD 1084
++K E+E + ID D
Sbjct: 375 QEKIEEEDAKPSFLIDTDD 393
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 31.9 bits (69), Expect = 4.2
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 1004 EAKSAPTADPIKAKVEFWKLFKDDTEWWKALAKRNLEKMEESRRELQRFSGHELVLEEIK 1063
+A++ A + K E + K+ E L K EK EE+RR + F+ + IK
Sbjct: 683 KAENERRAVEAREKAEQERKMKEQQELELQL-KEAFEKEEENRRMREAFALEQEKERRIK 741
Query: 1064 MERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQKYEEM 1102
R+K E E+ R++ ++ + + K LE ++K ++
Sbjct: 742 EAREKEENER-RIKEAREKAELEQRLKATLEQEEKERQI 779
>At3g54170.1 68416.m05988 FKBP12 interacting protein (FIP37)
identical to FKBP12 interacting protein (FIP37)
GI:3859944 from [Arabidopsis thaliana]
Length = 330
Score = 31.9 bits (69), Expect = 4.2
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 73 NLLADPASNQQQVLSAATVIAKHTSALCNACRVASGKTTEPQAKRHFVQAAKDVANS 129
N D AS Q ++ SA T I K SA N V +GK+ EP+ ++Q K S
Sbjct: 63 NCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSPEPRFLIDYIQNLKSSEKS 119
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity to
filamin-interacting protein S-FILIP [Rattus norvegicus]
GI:21392397, nonmuscle heavy chain myosin II-A [Mus
musculus] GI:17978023
Length = 394
Score = 31.9 bits (69), Expect = 4.2
Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 1279 STSQEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVT 1338
S QE+L + + + +L++ AE+ L +I+ + +E++++ E
Sbjct: 79 SQLQEELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQE----- 133
Query: 1339 NVTSLLKTVKAVEDEHTRGTRALESTIEAISQ-EIEVLMSPSP-PKSTATPEELIRCTRQ 1396
+ ++A++ +H + AL S I + + + ++ S S +S L + RQ
Sbjct: 134 RDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESELEQSKYEVRSLEKLVRQ 193
Query: 1397 MXXXXXXXXXXXXXXXQDQLTAAANLGRKTVVDL 1430
+ ++L A NL R+ + L
Sbjct: 194 LEEERVNSRDSSSSMEVEELKEAMNLSRQEITQL 227
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity to
filamin-interacting protein S-FILIP [Rattus norvegicus]
GI:21392397, nonmuscle heavy chain myosin II-A [Mus
musculus] GI:17978023
Length = 394
Score = 31.9 bits (69), Expect = 4.2
Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 1279 STSQEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVT 1338
S QE+L + + + +L++ AE+ L +I+ + +E++++ E
Sbjct: 79 SQLQEELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQE----- 133
Query: 1339 NVTSLLKTVKAVEDEHTRGTRALESTIEAISQ-EIEVLMSPSP-PKSTATPEELIRCTRQ 1396
+ ++A++ +H + AL S I + + + ++ S S +S L + RQ
Sbjct: 134 RDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESELEQSKYEVRSLEKLVRQ 193
Query: 1397 MXXXXXXXXXXXXXXXQDQLTAAANLGRKTVVDL 1430
+ ++L A NL R+ + L
Sbjct: 194 LEEERVNSRDSSSSMEVEELKEAMNLSRQEITQL 227
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity to
filamin-interacting protein S-FILIP [Rattus norvegicus]
GI:21392397, nonmuscle heavy chain myosin II-A [Mus
musculus] GI:17978023
Length = 396
Score = 31.9 bits (69), Expect = 4.2
Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 1279 STSQEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVT 1338
S QE+L + + + +L++ AE+ L +I+ + +E++++ E
Sbjct: 81 SQLQEELKKAKEELNRSEALKREAQEEAEDAKHQLMDINASEDSRIEELRKLSQE----- 135
Query: 1339 NVTSLLKTVKAVEDEHTRGTRALESTIEAISQ-EIEVLMSPSP-PKSTATPEELIRCTRQ 1396
+ ++A++ +H + AL S I + + + ++ S S +S L + RQ
Sbjct: 136 RDKTWQSELEAMQRQHGMDSTALSSAINEVQKLKSKLFESESELEQSKYEVRSLEKLVRQ 195
Query: 1397 MXXXXXXXXXXXXXXXQDQLTAAANLGRKTVVDL 1430
+ ++L A NL R+ + L
Sbjct: 196 LEEERVNSRDSSSSMEVEELKEAMNLSRQEITQL 229
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 31.9 bits (69), Expect = 4.2
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 1039 LEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQK 1098
+E+M RR+ +++ H ++ ++++ KYE+ K + ++E +DL D K
Sbjct: 405 VEEMRVKRRDAEQWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIK 464
Query: 1099 YEEMVLKLIEFAK--KDFIYKGFDPLIERLKALANVHVEGRKRKVVNIEDIL 1148
+ LKL++ + + D L RLK + R+ +ED+L
Sbjct: 465 -RHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDML 515
>At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical to
dynamin-like protein 6 (ADL6) [Arabidopsis thaliana]
GI:6651399; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain, PF00169: PH domain
Length = 914
Score = 31.9 bits (69), Expect = 4.2
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 497 TRMVGVAKEIARLATDMTAKAATEPGRLVELGNEMCGKYEQLAQDSVGAS-ATTPSGDVA 555
TR +G+ +I + A + A AA + L G +A S A+ SG
Sbjct: 197 TRTIGIIGKIDQAAENSKALAAVQ-ALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGE 255
Query: 556 NRIRSAVVELGESISELIKAGGHCRLSAIAQNQRAVADSAKLVNERVVSVLSGLQAGSRG 615
N + +A ES+ ++ +L IA + + R+ SVLSGLQ S+
Sbjct: 256 NSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQI 315
Query: 616 TQ 617
Q
Sbjct: 316 VQ 317
>At4g13540.1 68417.m02111 expressed protein
Length = 210
Score = 31.5 bits (68), Expect = 5.5
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 1036 KRNLEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEY 1095
K N ++ E+RREL E V+ +KM ++ KE+ RL+ + + +++K + +
Sbjct: 20 KANEQRRRETRRELDE---KERVILALKMAETEWRKERKRLREEVKRLRQKMEEKEEGKA 76
Query: 1096 DQKYEEMVLK 1105
Q E V++
Sbjct: 77 KQHEWEWVVE 86
>At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q27974
Auxilin {Bos taurus}
Length = 909
Score = 31.5 bits (68), Expect = 5.5
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 1636 ERLISSARQVASSTAHLLVACKVKADPGAESTRRLQAAGAEVIRS-TDNLVRAARDAIHC 1694
ER AR+ A++ AH V +A G + R +A A V R+ + RAA A
Sbjct: 552 ERATREARERAATEAHAKVQ---RAAVGKVTDARERAERAAVQRAHAEARERAAAGAREK 608
Query: 1695 DDERSLVLNRRMVGGIAQ-EIDARSEVLRIEKELEEARGRLTAIRQAK 1741
++ + R + + E R+E +E+ EARGR A +AK
Sbjct: 609 AEKAAAEARERANAEVREKEAKVRAERAAVERAAAEARGRAAAQAKAK 656
>At3g60930.1 68416.m06816 expressed protein
Length = 798
Score = 31.5 bits (68), Expect = 5.5
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 1623 EAANALVQGAATEERLISSARQVASSTAHLLVACKVKADPGAESTRRLQAAGAEVIRSTD 1682
E A+ ++ A+ R++ S S ++ VA K+ AE+ R+QA E +
Sbjct: 554 ETASHFLRAVASMNRMVHSYDSAMRS--NMEVAGKL-----AEAESRIQAIERE---KNE 603
Query: 1683 NLVRAARDAIHCDD-ERSLVLNRRMVGGIA-QEIDARSEVLRIEKELEEARG 1732
L AA + ++ ER+ +N+ +A Q + A SE++R+++ L EARG
Sbjct: 604 ALSEAAAAKLEKEEVERTAHVNKENAIKMAEQNLKANSEIVRLKRMLSEARG 655
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 31.5 bits (68), Expect = 5.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 1055 HELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQKYEEMVLKLIEFAKKDF 1114
H+ L E+K+ K ++ T++ I E + +QK D++ D+K E + +E K+
Sbjct: 863 HDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMKLDRKKLENEVTRMEMEHKNC 922
Query: 1115 IYKGFDPLIER 1125
K D L+E+
Sbjct: 923 SVK-VDKLVEK 932
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 31.5 bits (68), Expect = 5.5
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 1039 LEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQK 1098
L +E +++ S L E+ + +D +EK KT+L+ ++ S+Q K LE ++
Sbjct: 797 LSHIECLEKDIGSLSSSSLAKEKENLRKD-FEKTKTKLKDTESKLKNSMQDKTKLEAEKA 855
Query: 1099 YEEMVLKLIEFAK 1111
E LK + K
Sbjct: 856 SAERELKRLHSQK 868
>At2g37420.1 68415.m04589 kinesin motor protein-related
Length = 1039
Score = 31.5 bits (68), Expect = 5.5
Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Query: 791 NDYNSCDSETDLFQSDQEEELVKLLDYSSQDDDVSPTIFHDDCEEIVAYIESRMRRPTRT 850
N+ N +SE F E E KLLD S D + H+ ++++ E+ ++ ++
Sbjct: 455 NELNLSESEVSKFCDLYETEKEKLLDVESDLKDCKRNL-HNSNKDLLDLKENYIQVVSKL 513
Query: 851 PEDEGLNERYNAAARYSIVDMDWRVLKYGENILLGEVKKLLDLCLQLSDRNDSRRKDESL 910
E E + R A+ S++D G L ++ D+ D D
Sbjct: 514 KEKEVIVSRMK-ASETSLIDR-----AKGLRCDLQHASNDINSLFTRLDQKDKLESDNQS 567
Query: 911 QRLRASTQLDTEMHTLSRVI 930
L+ +QLD + L R +
Sbjct: 568 MLLKFGSQLDQNLKDLHRTV 587
>At5g64520.2 68418.m08107 DNA repair protein-related contains weak
similarity to DNA-repair protein XRCC2 (X-ray repair
cross-complementing protein 2) (Swiss-Prot:O43543) [Homo
sapiens]
Length = 342
Score = 31.1 bits (67), Expect = 7.3
Identities = 27/132 (20%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 1253 ILKNRENQFGTIDN--WWSFYEAILNKESTSQEDLNRLRAVVQYRNSLRKRPHSRAEEQL 1310
+LK+R Q + N WW E+ + +++E + Y + +++ + R + L
Sbjct: 102 MLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSL 161
Query: 1311 RMLDEIHNNRFR-EVEDVQEKKDESVMVTNV-----TSLLKTVKAVEDEHTRGTRALEST 1364
+L + +R + ++ + +M+ ++ T L + A+E H R + +L +
Sbjct: 162 ELLSSLKTLHYRIQQQEACGSQVGVLMIDSIGAFHWTDRLSSSLALET-HNRKSLSLTNV 220
Query: 1365 IEAISQEIEVLM 1376
+E I QE++ L+
Sbjct: 221 VETIVQELKKLL 232
>At5g64520.1 68418.m08106 DNA repair protein-related contains weak
similarity to DNA-repair protein XRCC2 (X-ray repair
cross-complementing protein 2) (Swiss-Prot:O43543) [Homo
sapiens]
Length = 372
Score = 31.1 bits (67), Expect = 7.3
Identities = 27/132 (20%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 1253 ILKNRENQFGTIDN--WWSFYEAILNKESTSQEDLNRLRAVVQYRNSLRKRPHSRAEEQL 1310
+LK+R Q + N WW E+ + +++E + Y + +++ + R + L
Sbjct: 102 MLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSL 161
Query: 1311 RMLDEIHNNRFR-EVEDVQEKKDESVMVTNV-----TSLLKTVKAVEDEHTRGTRALEST 1364
+L + +R + ++ + +M+ ++ T L + A+E H R + +L +
Sbjct: 162 ELLSSLKTLHYRIQQQEACGSQVGVLMIDSIGAFHWTDRLSSSLALET-HNRKSLSLTNV 220
Query: 1365 IEAISQEIEVLM 1376
+E I QE++ L+
Sbjct: 221 VETIVQELKKLL 232
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 31.1 bits (67), Expect = 7.3
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 1039 LEKMEESRREL-QRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQ 1097
LE E S+R Q+ + +L E +K+ER K E+E + Q + +KK++ E
Sbjct: 1522 LEAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRKKKEAEMAW 1581
Query: 1098 KYE-EMVLKLIEFAKKDF 1114
K E E K E +K+F
Sbjct: 1582 KQEMEKKKKEEERKRKEF 1599
>At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 295 GQRECAAALDTLNKQLRELDHAAIQAVAQELEPRKANTLQGYAEQIENCCTEMLERLEPL 354
G +C D L K++R + + V + + T + +E + CC ++ERL P+
Sbjct: 1087 GLIQCGTTSDELLKKIRVIQSDTLSMVQGSMTAG-STTSEASSEAVRICCDGLVERLLPV 1145
Query: 355 RVA 357
+ A
Sbjct: 1146 KTA 1148
>At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 31.1 bits (67), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 295 GQRECAAALDTLNKQLRELDHAAIQAVAQELEPRKANTLQGYAEQIENCCTEMLERLEPL 354
G +C D L K++R + + V + + T + +E + CC ++ERL P+
Sbjct: 1087 GLIQCGTTSDELLKKIRVIQSDTLSMVQGSMTAG-STTSEASSEAVRICCDGLVERLLPV 1145
Query: 355 RVA 357
+ A
Sbjct: 1146 KTA 1148
>At4g02710.1 68417.m00366 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 31.1 bits (67), Expect = 7.3
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 1004 EAKSAPTADPIKAKVEFWKLFKDDTEWWKALAKRNLEKMEESRRELQRFSGHELVLEEIK 1063
E K+ I KVE + F D + +R LE+++ +LQ+ ++ +E++K
Sbjct: 919 ETKALSEESLIVEKVEIFDGFMDPNR--EVNKRRVLERLDS---DLQKLENLQITVEDLK 973
Query: 1064 MERDKYEKEKTRL 1076
+ + EKEKT++
Sbjct: 974 SKVETVEKEKTKV 986
>At3g56770.1 68416.m06314 basic helix-loop-helix (bHLH) family protein
contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 230
Score = 31.1 bits (67), Expect = 7.3
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 1301 RPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVTNVTSLLKTVKAVEDEHTRGTRA 1360
R H AE + R H N+ R++ K D+S ++ V +K +K E T
Sbjct: 47 RNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLEIT----- 101
Query: 1361 LESTIEAISQEIEVL 1375
+ TI + + EI VL
Sbjct: 102 -DETIPSETDEISVL 115
>At1g51745.1 68414.m05831 expressed protein
Length = 635
Score = 31.1 bits (67), Expect = 7.3
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 976 CSIKNSPEREMI--LTPQEPRGSTEIFITPEAK--SAPTADPIKAKVE-FWKLFKDDTEW 1030
C I +SP + ++ LT + R S +F+ EA SA T+ P V + +T
Sbjct: 389 CRI-SSPRKALVTDLTRRCGRNSHNVFVKNEASNGSACTSPPASEPVNCILSGIEKNTSK 447
Query: 1031 WKALAKRNLEKMEESRRELQRFSGHE 1056
W+ KRN +M + + E + G E
Sbjct: 448 WQLKGKRNSRQMSKKQEERRNVYGEE 473
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 31.1 bits (67), Expect = 7.3
Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 1027 DTEWWKALAKRNLEKMEES--RRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEV- 1083
+ E A K +EK+ + L+ + + V+ + ++ +K EKEKT +Q DE+
Sbjct: 215 ELETTAAERKLKIEKLNSQLEKLHLELTTKEDEVIHLVSIQ-EKLEKEKTNVQLSSDELF 273
Query: 1084 DTSIQKKRDL-EYDQKYEEMVLKLIEFAKKDFIYK-GFDPL 1122
+ ++ ++++ + D+ ++ +L E KK+ +K FD L
Sbjct: 274 EKLVRSEQEVKKLDELVHYLIAELTELDKKNLTFKEKFDKL 314
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 31.1 bits (67), Expect = 7.3
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 1251 EDILKNRENQFGTIDNWWSFYEA--ILNKESTSQEDLNRLRAVVQYR------NSLRKRP 1302
ED + + + G +D + EA + K+S + ++ A+VQY+ ++L +R
Sbjct: 303 EDRISLAQKEAGEVDERANRAEAETLALKQSLVSSETDKEAALVQYQQCLKTISNLEERL 362
Query: 1303 HSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVTNVTSL--LKTVKAVEDEHTRGTRA 1360
H +AEE R+ ++ N EVE +++K + + L + + + D + A
Sbjct: 363 H-KAEEDSRLTNQRAENAEGEVESLKQKVSKLIEENEAYELQYQQCLDTIADLKLKLFHA 421
Query: 1361 LESTIEAISQEIE 1373
E T + +S+EIE
Sbjct: 422 QEET-QRLSREIE 433
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 30.7 bits (66), Expect = 9.7
Identities = 22/93 (23%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 1281 SQEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVTNV 1340
+Q++LN+L+ ++ ++R++ S E R +DE+ R++E V E +D + T
Sbjct: 71 AQKELNKLKEQLKNAETIREQALSELEWSKRTVDEL----TRKLEAVNESRDSANKAT-- 124
Query: 1341 TSLLKTVKAVEDEHTRGTRALESTIEAISQEIE 1373
+ K++ +E G ++ S+ +A ++++E
Sbjct: 125 ----EAAKSLIEEAKPGNVSVASSSDAQTRDME 153
>At4g20240.1 68417.m02957 cytochrome P450, putative similar to
|C71R_ARATH Cytochrome P450 71A27 (SP:O65438)
[Arabidopsis thaliana]
Length = 865
Score = 30.7 bits (66), Expect = 9.7
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 1029 EWWKALAKRNLEKMEESRRELQRFSGHELVLEEIKMERDKYEK 1071
+W L R+ E M++ + E+Q +S ++L + E ++E KY K
Sbjct: 713 DWAMTLVVRHPESMKKLQEEIQTYSRNKLYVPEEEVENMKYLK 755
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-containing
protein / cell division protein-related similar to GlsA
[Volvox carteri f. nagariensis] GI:4633129; contains Pfam
profiles PF00226 DnaJ domain, PF00249 Myb-like
DNA-binding domain
Length = 663
Score = 30.7 bits (66), Expect = 9.7
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 1294 YRNSLRKRPHSRAEEQLRMLDEIHNNRFREVED-VQEKKDESVMVTNVTSLLKTVKAVED 1352
Y N +K+ ++ ++ +L + N R+ ED +++ E+ + + L K +A +D
Sbjct: 110 YANKGKKKSGTQQQDHYALLG-LSNLRYLATEDQIRKSYREAALKHHPDKLAKAKEAKKD 168
Query: 1353 EHTRGTRALESTIEAISQEIEVLMSPS 1379
E +ES +AI + EVLM P+
Sbjct: 169 E-------IESRFKAIQEAYEVLMDPT 188
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 30.7 bits (66), Expect = 9.7
Identities = 18/72 (25%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 1034 LAKRN---LEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKK 1090
L+K+N +++EE++ E + + + V+E+ ER++ EK L ++ ++ ++KK
Sbjct: 1478 LSKQNQSLAKQLEEAKEEAGKRTTTDAVVEQSVKEREEKEKRIQILDKYVHQLKDEVRKK 1537
Query: 1091 RDLEYDQKYEEM 1102
+ + +K EE+
Sbjct: 1538 TE-DLKKKDEEL 1548
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 30.7 bits (66), Expect = 9.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 788 NGRNDYNSCDSETDLFQSDQEEELVKLLDYSSQDDD 823
+G +D +S D E D Q D +E L L D + +D+D
Sbjct: 109 SGSDDLSSTDGEDDKSQGDDQETLGGLTDDTQEDND 144
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.129 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,674,736
Number of Sequences: 28952
Number of extensions: 1229581
Number of successful extensions: 4314
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 4255
Number of HSP's gapped (non-prelim): 98
length of query: 1856
length of database: 12,070,560
effective HSP length: 92
effective length of query: 1764
effective length of database: 9,406,976
effective search space: 16593905664
effective search space used: 16593905664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
- SilkBase 1999-2023 -