GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001371-TA|BGIBMGA001371-PA|IPR002558|I/LWEQ
         (697 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   3.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   5.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   7.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   7.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 565 SFGQAFNNLLGVGMEMAGQTEDRETQSLMVNSMKSVTVNSSKL 607
           S   AFN+L  V +E+AG        +L  N + +V + +  L
Sbjct: 470 SLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVTHSL 512


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 268 TQLITSA----QNATQYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKP 315
           T L+TSA    QN  +  T  +    L E  ++ NE   R+VE +     KP
Sbjct: 113 TGLLTSAGPKWQNRRKILTPAFHFNILQEFIQIFNEETKRLVEDLEAECHKP 164


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)

Query: 329 EAFLQPSGHVISAARGALP 347
           EAF QP GH+++ A  A+P
Sbjct: 165 EAF-QPKGHLLTIAVSAIP 182


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 275 QNATQYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKP 315
           QN  +  T  +    L E  ++ NE   R+VE +   + KP
Sbjct: 124 QNRRKILTPAFHFNILQEFIQIFNEETKRLVEDLEAESHKP 164


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.123    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,539
Number of Sequences: 317
Number of extensions: 3158
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 4
length of query: 697
length of database: 114,650
effective HSP length: 62
effective length of query: 635
effective length of database: 94,996
effective search space: 60322460
effective search space used: 60322460
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)