Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001371-TA|BGIBMGA001371-PA|IPR002558|I/LWEQ
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 32 0.31
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 31 0.54
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 31 0.71
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 28 3.8
SPBC409.09c |mis13|cnl1|kinetochore protein Mis13|Schizosaccharo... 28 3.8
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 27 8.8
SPBC3B8.08 |||Sjogren's syndrome/scleroderma autoantigen 1 famil... 27 8.8
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 8.8
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 31.9 bits (69), Expect = 0.31
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 461 ETVKKQISSSEQVDSAALASIAKDITHGLEQTMEAVPSHTELDLAMENINETLNILNMGE 520
E VK+ +S EQVDSA L S K + L ++ E T D+ EN N+ NM
Sbjct: 965 EEVKQSVS--EQVDSAQLTSEPK--SESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDN 1020
Query: 521 FPPTDSS 527
D S
Sbjct: 1021 VATVDKS 1027
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 31.1 bits (67), Expect = 0.54
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 5 TDILLSLAKAVANTTXXXXXXXXXXXXQCRDDQQLQNNIIAAATHCALATSQLVACAKVV 64
T+ L+S AKAVA T + L I A + AT+QLVA ++V
Sbjct: 947 TEGLISAAKAVARATTTLIETADGVVNGTSSFEHL----IVACNGVSAATAQLVAASRVK 1002
Query: 65 APTLHSAACREQLTSAARQVAQAVDRLV 92
A ++ ++ L AA+ V +A LV
Sbjct: 1003 AN--FASKVQDHLEDAAKAVTEACKALV 1028
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 30.7 bits (66), Expect = 0.71
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 292 EECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFLQPSGHVISAARGALPTVSE 351
++ K+ N+ L + ++++ + + + L +S +F SGH+ ++ R +S
Sbjct: 1279 DDRKIDNKLLKTISKSLDALQLTVEEELSNLYSLSKDLSFTDISGHIPNSIRKLEKGLST 1338
Query: 352 PSAAKHL--ADNTQLYTSSCADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEEAV 409
S K A N+ + A+ +R DA + +I SLQ++L E +
Sbjct: 1339 LSELKERLNASNSDRPSPDIFKDTQAIMNSRKLLSNPNSDAQSGLISSLQKKLYNPESNM 1398
Query: 410 RAFDLKPL 417
LKPL
Sbjct: 1399 EFTGLKPL 1406
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 28.3 bits (60), Expect = 3.8
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Query: 265 SSATQLITSAQNATQYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDL 324
SS +L T+A NA Q + Q+ L ++C+ + + +V ++ +++ + L
Sbjct: 58 SSLFELFTTAMNA-QLHEMEQCQKKLEDDCQQRIDSIRFLVSSLKLTD-DTSSLKIESPL 115
Query: 325 ISASEAFLQPSGHVISAARGALPTVSE-----PSAAKHLA------DNTQLYTSSCADLR 373
I G ++ L T+ E S L D + S +D
Sbjct: 116 IQCLNRLSMVEGQYMAQYDQKLSTIKEMYHKLESYCNRLGSPFVLPDFENSFLSDVSDAF 175
Query: 374 SAVSRARISCKGLELDAAAEIIKSLQEEL 402
+ R RI+ E+DA E+I S +EE+
Sbjct: 176 TESLRGRINEAEKEIDARLEVINSFEEEI 204
>SPBC409.09c |mis13|cnl1|kinetochore protein
Mis13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 329
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 499 HTELDLAMENINETLNILNMGEFPPTDSSYGEL 531
HT LD+ ENI+ ++ N G P SSYG L
Sbjct: 258 HTLLDMLAENIHTLHSLTNAG--PEVRSSYGRL 288
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 634 VTDSINKLVDACTQAAPGHKACGAARRSVQAARPLL 669
VTDSI+K +D T+A+P A + + AA+ +L
Sbjct: 650 VTDSISKCIDEITKASPFADHPAAMQYIMNAAQDIL 685
>SPBC3B8.08 |||Sjogren's syndrome/scleroderma autoantigen 1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 153
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 446 ISSGRQVLYSSLTLVETVKKQISSSEQVDSAALASIAKDITHGLEQTMEAVPSHTE-LDL 504
IS S T V ++ SS Q + + + ++ L+ + +P +TE LD+
Sbjct: 74 ISKTNDAERSQQTTKAPVMERTESSHQATLSVYSRLISELESQLDDRLP-LPHNTEFLDV 132
Query: 505 AMENINETLNILNMGE 520
+++ I LN++++ +
Sbjct: 133 SLQRIERILNLISLAK 148
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 473 VDSAALASIAKDITHGLEQTMEAVPSHTELDLAMENINE 511
+++A L ++ LEQT+E PS L+ + N+ E
Sbjct: 119 IETADLNDFPLELRSVLEQTLEKTPSSDALETNLPNVRE 157
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.123 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,186,087
Number of Sequences: 5004
Number of extensions: 68217
Number of successful extensions: 235
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 230
Number of HSP's gapped (non-prelim): 11
length of query: 697
length of database: 2,362,478
effective HSP length: 78
effective length of query: 619
effective length of database: 1,972,166
effective search space: 1220770754
effective search space used: 1220770754
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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