Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001371-TA|BGIBMGA001371-PA|IPR002558|I/LWEQ
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24) 243 4e-64
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 36 0.11
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.15
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.19
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 34 0.34
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.34
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 34 0.44
SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.0
SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32) 33 1.0
SB_43775| Best HMM Match : Flg_hook (HMM E-Value=4.7e-17) 32 1.8
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8) 31 2.4
SB_14652| Best HMM Match : E-MAP-115 (HMM E-Value=4.6) 31 2.4
SB_592| Best HMM Match : DUF1279 (HMM E-Value=0.68) 31 2.4
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_44519| Best HMM Match : Ribonuc_red_lgC (HMM E-Value=0) 31 4.1
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 31 4.1
SB_47523| Best HMM Match : HLH (HMM E-Value=1.1e-18) 31 4.1
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 30 7.2
SB_54872| Best HMM Match : NuiA (HMM E-Value=7.4) 30 7.2
SB_53864| Best HMM Match : Herpes_US9 (HMM E-Value=2) 30 7.2
SB_370| Best HMM Match : DUF1279 (HMM E-Value=0.35) 30 7.2
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 29 9.6
SB_9375| Best HMM Match : Sec6 (HMM E-Value=0.35) 29 9.6
SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_37613| Best HMM Match : zf-B_box (HMM E-Value=2.7e-07) 29 9.6
SB_34777| Best HMM Match : VWA (HMM E-Value=0) 29 9.6
SB_29337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5) 29 9.6
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
>SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24)
Length = 2278
Score = 243 bits (594), Expect = 4e-64
Identities = 191/704 (27%), Positives = 306/704 (43%), Gaps = 19/704 (2%)
Query: 6 DILLSLAKAVANTTXXXXXXXXXXXXQCRDDQQLQNNIIAAATHCALATSQLVACAKVVA 65
+ LL LA+AVAN T QC D Q QN +I AA A+ TSQLVAC K+V
Sbjct: 657 ETLLKLAQAVANATATLVLKAKNVASQCPDTAQ-QNKVIGAAKDTAMTTSQLVACVKLVV 715
Query: 66 PTLHSAACREQLTSAARQVAQAVDRLVEXXXXXXXXXXXXXXXXXXXXHCVSEELERLLA 125
P++ S C+EQ+ +A+QVA+AV+ V + L LL
Sbjct: 716 PSITSQMCQEQVVESAKQVAKAVEDTEGACKGACDPDSENMNVLIDAAQGVRDALNALLK 775
Query: 126 HCQXXXXXXXXXXXXXXX--XXXXXHERLLAAAGPA-DMLRHARQLGHATALLITNIKTE 182
+ +RL + G A +M++ A+ L AT+ L++ IK+E
Sbjct: 776 KVREGGERPTEGEKYGETCDDILGATDRLFNSMGNAGEMVKQAKILAQATSSLVSGIKSE 835
Query: 183 AE-ESPSDSQRXXXXXXXXXXDATARMVEAARQCASSPQDREKQEVLR-KAAEELRFITA 240
AE + D+Q+ DATA++VEAA+ A + Q V +AA + A
Sbjct: 836 AEVQDDDDNQKRLLAAAKLLADATAKLVEAAKNAAKEATGQTTQLVAAAQAAAPVNRNQA 895
Query: 241 DYAQGQDI---VGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVL 297
Q D V Q+ARL ES R +++ + L+ K
Sbjct: 896 SQQQLMDQLKPVEDQIARLLESLRDCSNNPDDANSQLNLINVSKMFIPPVAKLVAFSKAA 955
Query: 298 NEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFLQPSG--HVISAARGALPTVSEPSAA 355
+ + A + N + AA+ +L +A+E + G V SA + + A
Sbjct: 956 LPTIDEPMYASQLGNFSKSTAASLNELRNAAEKAAEACGTLEVDSALKRLKALDDDLKAV 1015
Query: 356 KHLADNTQLYTSSCADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEEAVRAFDLK 415
+ A+ +L + S+ + K + A + + Q +E + A D
Sbjct: 1016 ERAAEEGKLVPLPGENPESSALELGATSKTVGSSMAQLLTAAAQG--NESYTGIAARDT- 1072
Query: 416 PLPGQTAEWXXXXXXXXXXXXXXXXXXLVVISSGRQVLYSSLTLVETVKKQISS-SEQVD 474
+ ++ + R V+ S L+ KK +++ + +
Sbjct: 1073 ---ANALKNLTQAVRGVAAGTSDKDAQKNIVQAARGVIQESAKLINEAKKALNNPGDPNN 1129
Query: 475 SAALASIAKDITHGLEQTMEAVPSHTELDLAMENINETLNILNMGEFPPTDSSYGELQVX 534
LA +AK ++ L + +P E++ +++ ++ L+ EFPPT Y Q
Sbjct: 1130 QQRLAQVAKGVSQALNNCVNCLPGQREVEDSIKAVSAASQALSKEEFPPTTEPYQRNQEK 1189
Query: 535 XXXXXXXXXXXXXXXXXXX-DDPRTLADSSHSFGQAFNNLLGVGMEMAGQTEDRETQSLM 593
P LA S+ +F ++ L+ G+ +AGQ D + +
Sbjct: 1190 LSQSGAALNAAASDVVSASRGSPNQLATSTKNFSLSYQGLVNSGLMLAGQAPDEAAKEAL 1249
Query: 594 VNSMKSVTVNSSKLLGTAKSVSQDLSRPNAKNQLTAAARAVTDSINKLVDACTQAAPGHK 653
V ++++ + SSKLL A+S+ D + PNAKN L AARAVTDSIN L++AC AAPG K
Sbjct: 1250 VRNLRNTSTASSKLLLAARSLVSDPNAPNAKNALANAARAVTDSINTLLNACMSAAPGQK 1309
Query: 654 ACGAARRSVQAARPLLDAPAQPLSDLSYFACLDAVLDHSKQLSE 697
C +A R++QA +LD P +P++D +YF CL+ V SK L+E
Sbjct: 1310 ECDSALRNIQAVNTILDNPVEPVNDSTYFDCLETVAGKSKDLTE 1353
Score = 40.7 bits (91), Expect = 0.004
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 554 DDPRTLADSSHSFGQAFNNLLGVGMEMAGQTEDRETQSLMVNSMKSVTVNSSKLLGTAKS 613
DD L D++ AF+ LL E AG D+E +S ++N+ +V + ++LL
Sbjct: 591 DDSSKLLDAARGLAGAFSLLLKAAQEGAG--GDKEKRSQLLNAAGNVGSSGAQLLEYMGE 648
Query: 614 VSQDLSRPNAKNQLTAAARAVTDSI----NKLVDACTQAAPGHKACGAARRSVQAARPLL 669
D +L A T ++ + C A +K GAA+ + L+
Sbjct: 649 PEVDQETQETLLKLAQAVANATATLVLKAKNVASQCPDTAQQNKVIGAAKDTAMTTSQLV 708
Query: 670 DAPAQPLSDLSYFACLDAVLDHSKQLSE 697
+ ++ C + V++ +KQ+++
Sbjct: 709 ACVKLVVPSITSQMCQEQVVESAKQVAK 736
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 35.9 bits (79), Expect = 0.11
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 163 RHARQLGHATALLITNIKTEAEESPSDSQRXXXXXXXXXXDATARMVEAARQC-ASSPQD 221
R ARQ H T L K + + + S+R AR +EA+ + S PQD
Sbjct: 422 RQARQASHRTNKLQDQNKQDKQAARPTSRRIKTSKLQDQDKQAARPIEASHKTKRSKPQD 481
Query: 222 REKQEVL-RKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQ 269
++KQ R+A+ + + Q QD Q + ++++RQAT A Q
Sbjct: 482 QDKQAARPRQASSKTK---TSKPQDQD-KQDQHKQDKQASRQATRQARQ 526
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 35.5 bits (78), Expect = 0.15
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 227 VLRKAAEELRFITADYAQGQ---DIVGSQVARLQESARQATSSATQLITSAQNATQYNTN 283
+LRK EL+ +TAD A+ + D V SQ R +E R+A A L T A +
Sbjct: 1077 ILRKRRMELQEVTADLAEHRHELDAVISQCKRSEERMRRAEEDAGALETRASETSSGLIR 1136
Query: 284 RYSQETLLE-ECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASE----AFLQPSGHV 338
+Q L+ + + + E L ++ V++ + +A L + ++
Sbjct: 1137 AGNQLLSLDIKTRGMTEKLTQITAEVDLKKKELLEAEQSLVKVRKDSDGVMTSVEERTRE 1196
Query: 339 ISAARGALPTVSEPSA--AKHLADNTQLYTSSCADLRSAVSRARISCKGLELDAAAEIIK 396
+ + L E + K L + S+CAD S + S + ELD + +K
Sbjct: 1197 LKSLESRLADTEERLSLYLKELVSLKKQVVSACADRDRVQSDNKTSHQ--ELDIVKQELK 1254
Query: 397 SLQEELDELEEAVR 410
++EL+ L + R
Sbjct: 1255 DQKQELESLINSKR 1268
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 35.1 bits (77), Expect = 0.19
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 216 ASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLI-TSA 274
A + ++ EV+ K A+EL+ AQ ++ +L+E R A + +++ +A
Sbjct: 1661 ARAGENEGNAEVMGKTADELKEKATKAAQNATESKTKALKLEEDIRNALNKTREIVDMAA 1720
Query: 275 QNATQYNTNRYSQETLLEEC-KVLNEHLPRMVEAVN 309
+ A + +Q LLEE K+L E R A+N
Sbjct: 1721 RVANTLKSGTANQSMLLEEAEKILKELQNRDFSALN 1756
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 34.3 bits (75), Expect = 0.34
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 221 DREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQY 280
DREK E+++ EE++ AD +Q V ++ AR++ + TS I +AQ +T
Sbjct: 196 DREK-ELIKDKIEEVKSKQADLSQALANVLNEKARIEVQRKSLTSEIDDFI-NAQISTLE 253
Query: 281 NTNRYSQETLLEECKVLNEHLPRMVEAVNVS 311
+ + ++ + + +N+HL + +++S
Sbjct: 254 RMHTNLXDEVISDYENINKHLASQEDYLSIS 284
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.34
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 220 QDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQAT------SSATQLITS 273
++RE+QE+L + EL + Y+ + + LQE R+ ++ +
Sbjct: 199 KEREQQELLLEQQRELELLRQKYSDAEAQAILEAENLQEEKRRREELERLHQELQNILLA 258
Query: 274 AQNATQYNTN-RYSQETLLEECKVLNEHLPRMVE 306
+ A + TN R QE LLEE K E L R+ E
Sbjct: 259 EKEAREAETNARALQEKLLEEEKKRLEELERLKE 292
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 33.9 bits (74), Expect = 0.44
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 292 EECKVLNEHLPRMV--EAVNVSNVKPTQAAARLDLISASEAFLQPSGHVISAARGALPTV 349
E+ KV+N + P M+ N S V+ A+ ++ + ++ S V
Sbjct: 242 EKYKVINLNGPDMIVQSKENGSTVRRNVQFAKKVQVAEPDTEVEVSEPEPETEHTGPDAV 301
Query: 350 SEPSAAKHL-ADNTQLYTSSCADLRSAVSRAR-ISCKGLELDAAAEIIKSLQEELDELEE 407
+ +HL +D S L + +S R SC+ D + E I + +E LDELE+
Sbjct: 302 TMAPKLQHLKSDGADECGSHQPSLLTTLSTTRGRSCESSSEDVSIEQIANARETLDELED 361
Query: 408 AVRAF--DLKPLPGQ 420
A R F DL+ + G+
Sbjct: 362 AYRKFKYDLESVKGE 376
>SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 32.7 bits (71), Expect = 1.0
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 210 EAARQCASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQ 269
+AAR S PQDR+KQ + A R Q QD Q AR ++++R+ +S Q
Sbjct: 92 QAARHKTSKPQDRDKQAARPRQAS--RKTETSKPQDQD---KQAARPRQASRKTETSKPQ 146
Query: 270 LITSAQNATQ 279
A TQ
Sbjct: 147 DTRQASRKTQ 156
>SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32)
Length = 1039
Score = 32.7 bits (71), Expect = 1.0
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 8/152 (5%)
Query: 273 SAQNATQYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFL 332
SA N++ Y Q+ L E +++ + V NV+ P + +++ SE +
Sbjct: 253 SAANSS-YTVKATPQDCLDESALQMSKSVSAAVSTANVNTSTPQVPTDDIKILTKSEIEI 311
Query: 333 QPSGHVISAARGALPTVSEPSAAKHLADNTQLYTSSCADLRSAVSRARI-SC------KG 385
PSG + SA+ P + A T+L+ + S +RI C +
Sbjct: 312 CPSGSIRSASPFISPNSRTTTVAPFKNVETELHQKDASSDNDNESASRIGGCVLRTVSRP 371
Query: 386 LELDAAAEIIKSLQEELDELEEAVRAFDLKPL 417
L I L EL ++VR+ L L
Sbjct: 372 LSAPMPRRSISDLARELPTPRQSVRSVSLPDL 403
>SB_43775| Best HMM Match : Flg_hook (HMM E-Value=4.7e-17)
Length = 299
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 243 AQGQDIVGSQVARLQESARQATSSATQLITSAQ-NATQYNTNRYSQETLLEECKVLNEHL 301
A G + +A+ Q +A T + + + +A N+ QETLL+ + +E
Sbjct: 62 AAGARVKAEPLAQAQSAAVGMTQTTMKYMADGNTSAADTNSEEQPQETLLDG--IDDEQK 119
Query: 302 PRMVEAVNVSNVKPTQAAARLDLISASEAFLQPSGHVISAARGALPTVSEPSAAKHLADN 361
P + A+N + A + A++ L P V+S A+ +L ++D+
Sbjct: 120 PEL--AINGRTATRIRPEADIQQSVATKESLTPPEPVVSVAKESLVIAPSGRGESFISDD 177
Query: 362 TQLYTS 367
L TS
Sbjct: 178 DSLITS 183
>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
Length = 1080
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 444 VVISSGRQVLYSSLTLVETVKKQISSS---EQVDSAALASIAKDITHGLEQTMEAVPSHT 500
+++ S V+ LT E K++S S ++ D + SIA+DI H +P H
Sbjct: 291 IILDSLYWVIRLLLTADEFEFKRMSPSPCKKKEDERRILSIAQDIIHCASNACTKLPKHI 350
Query: 501 ELDLAMENINETLNILNMGEFPPTDSSYGELQ 532
L + + ++ + ++++ SSY +L+
Sbjct: 351 SLAMTVHHLTGSKQLVSLLNRMGHSSSYDDLK 382
>SB_14652| Best HMM Match : E-MAP-115 (HMM E-Value=4.6)
Length = 192
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 251 SQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVLNEHLPR 303
S +R+ + R AT SATQ T+ T R ++L E+ LNE+L R
Sbjct: 3 STSSRMHAAHRMATRSATQTTAETSFITEGATTRLGLQSLREKYPDLNENLIR 55
>SB_592| Best HMM Match : DUF1279 (HMM E-Value=0.68)
Length = 321
Score = 31.5 bits (68), Expect = 2.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 233 EELRFITADYAQGQDI-VGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLL 291
E I D G+ I + S +R+ + AT SATQ A T+ R ++L
Sbjct: 25 ETTPLIPFDPDDGESIPITSTSSRMHAAHSMATRSATQTTAEASFTTEGAATRLGLQSLR 84
Query: 292 EECKVLNEHLPR 303
E+ LNE+L R
Sbjct: 85 EKYPDLNENLMR 96
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 31.1 bits (67), Expect = 3.1
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 181 TEAEESPSDSQRXXXXXXXXXXDATARMVEA-ARQCASSPQDREKQEVLRKAAEELRFIT 239
T A + P +Q T+ E+ + Q S+ Q+ +V E T
Sbjct: 1229 TSATQEPPSTQATSVTQESPSTQVTSATQESPSSQVTSATQESRYSQVTSVTQEPPS--T 1286
Query: 240 ADYAQGQDIVGSQVARL-QESARQATSSATQLITSAQNATQYNTNRYSQET 289
+ Q+ SQV + QES +SATQ S+Q + +RYSQ T
Sbjct: 1287 QVTSATQESRSSQVTSVTQESRSSQVTSATQESPSSQVTSATQESRYSQVT 1337
Score = 29.5 bits (63), Expect = 9.6
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Query: 182 EAEESPSDSQRXXXXXXXXXXDATARMVEAARQCASSPQDREKQEVLRKAAEELRFITAD 241
+ +ESPS +A + Q S+ Q+ +V A +E R
Sbjct: 679 KTQESPSTQVTSATQESHSSQVTSATQESRSSQVTSATQESRSTQVT-SATQERRSSQVT 737
Query: 242 YAQGQDIVGSQVARLQESARQA-TSSATQLITSAQNATQYNTNRYSQET 289
Q+ SQV + + R + +SATQ S Q + +RYSQ T
Sbjct: 738 SVT-QESRSSQVTSVTQEFRSSQVTSATQESRSTQVTSVTQESRYSQVT 785
>SB_44519| Best HMM Match : Ribonuc_red_lgC (HMM E-Value=0)
Length = 783
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 260 ARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVLNEHL 301
A T+S Q++ + ++ Y +N YS+ L E +++N HL
Sbjct: 586 APMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNHHL 627
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 30.7 bits (66), Expect = 4.1
Identities = 38/177 (21%), Positives = 62/177 (35%), Gaps = 3/177 (1%)
Query: 180 KTEAEESPSDSQRXXXXXXXXXXDATARMVEAARQCASSPQDREKQEVLRKAAEELRFIT 239
+T + PS + T +A Q + QD+++ ++ +L+
Sbjct: 937 ETIPTQKPSQQLQQTQAQLPQQPQETQEQAQATPQQQLATQDKQQATQGQEQETQLQQQA 996
Query: 240 ADYAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVLNE 299
Q + Q + QE A Q A A Q TN+ +Q ++ V
Sbjct: 997 TQVQQQATQLQQQANQQQEQATQLQQQAISQQQQAAQEQQQATNQQTQGGQAQQAAVPPP 1056
Query: 300 HLPRMVEAVNVSNVKP--TQAAARLDLISASEAFLQPSGHVISAARGALPTVSEPSA 354
P + NV P + A LI ++ FL G I G PT ++P A
Sbjct: 1057 PPPPSPTVPSTQNVGPMLSNAPGGKILIVSNTTFL-IGGQGIGDKGGLSPTSNQPMA 1112
>SB_47523| Best HMM Match : HLH (HMM E-Value=1.1e-18)
Length = 207
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 212 ARQCASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLI 271
+R+ ++ ++R + + +A E LR Y+Q Q + + RL S A + T+
Sbjct: 44 SRRLIANARERSRIHTMSEAFESLRKAVPSYSQDQKLSKLAILRLATSYISALADLTESD 103
Query: 272 TSAQNATQY 280
TSA++ +
Sbjct: 104 TSAKSLKHF 112
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 29.9 bits (64), Expect = 7.2
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 577 GMEMAGQTEDRETQ-SLMVNSMKSVTVNSSKLLGTAKSVSQDLSRPNAKNQLTAAARAVT 635
GM M T + TQ S+ V+ S+T+NS + T + + + + N N L A A
Sbjct: 1291 GMVMPSVTRNSITQDSICVDRATSITLNSQSICVTQQESTGNATSNNQINVLMADICADR 1350
Query: 636 DSINKLVDACTQAAPGHKACGAARRSVQAARPLLDAPAQPLSD 678
+ ++L + +A + ++ + + LLD PA P+ D
Sbjct: 1351 EEHDELPEEFNDLNTQPEAVTQSHDALLSQQILLD-PAAPVVD 1392
>SB_54872| Best HMM Match : NuiA (HMM E-Value=7.4)
Length = 303
Score = 29.9 bits (64), Expect = 7.2
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 221 DREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQY 280
+ EK++V+ +AA E ++ A + S++ + ++A ++ + QL++ +
Sbjct: 228 EAEKRKVMARAAFESHWVRATETELHRC-SSRLQSITDTALKSAKALVQLVSDKLKSQHT 286
Query: 281 NTNRYSQETLLEE 293
NT + ET +EE
Sbjct: 287 NTGTLACETAIEE 299
>SB_53864| Best HMM Match : Herpes_US9 (HMM E-Value=2)
Length = 615
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 251 SQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVLNEHLPRM 304
S +R+ + AT SATQ T+ R + ++L EE + LNE+L R+
Sbjct: 3 STSSRMHAAHGMATRSATQTTAETTFITEGAATRLALQSLREEYQDLNENLIRL 56
>SB_370| Best HMM Match : DUF1279 (HMM E-Value=0.35)
Length = 322
Score = 29.9 bits (64), Expect = 7.2
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 233 EELRFITADYAQGQDI-VGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLL 291
E I D G+ I + S +R+ + AT SATQ T+ R ++L
Sbjct: 25 ETTPLIPFDPHGGESIPMTSTSSRMHAAHSMATQSATQTTAETSFTTEGAATRLGLQSLR 84
Query: 292 EECKVLNEHLPR 303
EE LNE+L R
Sbjct: 85 EEYPDLNENLIR 96
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 29.5 bits (63), Expect = 9.6
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 150 ERLLAAA----GPADMLRHARQLGHATALLITNIKTEAEESPSDSQRXXXXXXXXXXDAT 205
+RLL AA PA +LR++ Q + LLI +K + S++ + T
Sbjct: 804 QRLLYAADSQRSPASILRYSNQAWYHAILLIDFVK---DTKKLTSRKLYGVYFH---NLT 857
Query: 206 ARMVEAARQCASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESAR 261
A R + + E+QE + + + + T++Y QGQ I+ + + ++SAR
Sbjct: 858 AHATSTLRLMSGQAANAERQERIFNSIKRITKQTSNYHQGQ-IIPNLSSACKQSAR 912
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 47 ATHCALATSQLVACAKVVAPTLHSAACREQLTSAAR 82
ATHC +++CAK+ H+ +CR++ + R
Sbjct: 1515 ATHCRDINCTMLSCAKMKRVVEHTKSCRKKTSGGCR 1550
>SB_9375| Best HMM Match : Sec6 (HMM E-Value=0.35)
Length = 1049
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 360 DNTQLYTSSCADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEE 407
D +TS + + + S G +LDA E++K QEE + E+
Sbjct: 455 DQVSNFTSDISKFKESFINEGPSSIGTDLDAGVELLKKFQEEYNTFEK 502
>SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 29.5 bits (63), Expect = 9.6
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 233 EELRFITADYAQGQDI-VGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLL 291
E I D G+ I + S +R+ + AT SATQ T+ R ++L
Sbjct: 787 ETTPLIPFDPDDGESIPMTSLSSRMHAAHSMATRSATQTTAETSFITEGAATRLGLQSLR 846
Query: 292 EECKVLNEHLPR 303
EE LNE+L R
Sbjct: 847 EEYPDLNENLIR 858
>SB_37613| Best HMM Match : zf-B_box (HMM E-Value=2.7e-07)
Length = 533
Score = 29.5 bits (63), Expect = 9.6
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 221 DREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQY 280
DREK E+ K EE++ D +Q D V ++ AR++ TS I +AQ +T
Sbjct: 121 DREKDEIKAKL-EEVKSKQTDSSQLHDKVVNEKARIEAQKNSLTSEIDDFI-NAQISTLE 178
Query: 281 NTNRYSQETLLEECKVLNEHL 301
++ ++ + + N+ L
Sbjct: 179 KMRSNLKDEVISDYEKRNKQL 199
>SB_34777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1268
Score = 29.5 bits (63), Expect = 9.6
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 316 TQAAARLDLISASEAFLQPSGHVISAARGALPTVSEPSAAKHLADNTQLYTSSCADLRSA 375
T+ ++R D+ ASE + HV+S G + E + L + + S + L S
Sbjct: 1189 TKGSSRDDIREASEDLHRDGVHVVSVGMGPVNDRMELANMASLPNKDNIVVSDYSKLSSN 1248
Query: 376 VSRAR-ISCK 384
V R R I CK
Sbjct: 1249 VKRLRDIICK 1258
>SB_29337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.5 bits (63), Expect = 9.6
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 233 EELRFITADYAQGQDI-VGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLL 291
E I D G+ I + S +R+ + AT SATQ T+ R ++L
Sbjct: 25 ETTPLIPFDPDDGESIPMTSTSSRMHAAHGMATRSATQTTAETSFITEGAATRLGLQSLR 84
Query: 292 EECKVLNEHLPR 303
EE LNE+L R
Sbjct: 85 EEYPDLNENLIR 96
>SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5)
Length = 715
Score = 29.5 bits (63), Expect = 9.6
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 444 VVISSGRQVLYSSLTLVETVKKQISSS---EQVDSAALASIAKDITHGLEQTMEAVPSHT 500
++ S V+ LT E K++S S ++ D + SIA+DI H +P H
Sbjct: 413 IITDSLYWVISLLLTADEFEFKRMSPSPCKKKEDERRILSIAQDIIHCASNARTKLPKHI 472
Query: 501 ELDLAMENINETLNILNMGEFPPTDSSYGELQ 532
L + + ++ + ++++ SSY +L+
Sbjct: 473 SLAMTVHHLTGSKQLVSLLNRMGHRSSYDDLK 504
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.5 bits (63), Expect = 9.6
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 571 NNLLGVGMEMAGQTEDRE-TQSLMVNSMKSVTVNSSKLLGTAKSVSQDLSRPNAKNQLTA 629
+ L+ V E AG E Q + S + ++ KL + K +SQ ++
Sbjct: 954 HQLMMVKDEHAGMASSLEQAQQIAQQSKQDISRVEDKLEASQKKISQIQQEKQQTEEMLH 1013
Query: 630 AARAVTDSINKLVDACTQAAPGHKACGAARRSVQAAR 666
A + DS+N+ + T+A KA + AAR
Sbjct: 1014 TANSTIDSLNEQLSQMTRADALTKAREQHESILNAAR 1050
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.123 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,151,354
Number of Sequences: 59808
Number of extensions: 498227
Number of successful extensions: 1570
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1520
Number of HSP's gapped (non-prelim): 63
length of query: 697
length of database: 16,821,457
effective HSP length: 87
effective length of query: 610
effective length of database: 11,618,161
effective search space: 7087078210
effective search space used: 7087078210
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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